Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
Usp40Q8BWR4 Gm44303-201ENSMUST00000196348 83 ntBASIC0.12□□□□□ -2.39
Usp40Q8BWR4 Mir28c-201ENSMUST00000200096 75 ntBASIC0.12□□□□□ -2.39
Usp40Q8BWR4 Gm25049-201ENSMUST00000158597 73 ntBASIC0.11□□□□□ -2.39
Usp40Q8BWR4 Mir3089-201ENSMUST00000175350 84 ntBASIC0.11□□□□□ -2.39
Usp40Q8BWR4 Mir7094-2-201ENSMUST00000184622 60 ntBASIC0.1□□□□□ -2.39
Usp40Q8BWR4 Mir7094-1-201ENSMUST00000199671 60 ntBASIC0.1□□□□□ -2.39
Usp40Q8BWR4 Gm22368-201ENSMUST00000102416 109 ntBASIC0.09□□□□□ -2.4
Usp40Q8BWR4 Gm25137-201ENSMUST00000083251 110 ntBASIC0.09□□□□□ -2.4
Usp40Q8BWR4 n-R5s171-201ENSMUST00000104128 79 ntBASIC0.06□□□□□ -2.4
Usp40Q8BWR4 Gm24793-201ENSMUST00000104289 132 ntBASIC0.06□□□□□ -2.4
Usp40Q8BWR4 Gm22077-201ENSMUST00000157594 93 ntBASIC0.06□□□□□ -2.4
Usp40Q8BWR4 Gm24903-201ENSMUST00000158131 126 ntBASIC0.06□□□□□ -2.4
Usp40Q8BWR4 Gm44589-201ENSMUST00000207025 115 ntBASIC0.06□□□□□ -2.4
Usp40Q8BWR4 Mir367-201ENSMUST00000083479 75 ntBASIC0.06□□□□□ -2.4
Usp40Q8BWR4 Gm23749-201ENSMUST00000104223 131 ntBASIC0.05□□□□□ -2.4
Usp40Q8BWR4 Gm24387-201ENSMUST00000104625 90 ntBASIC0.05□□□□□ -2.4
Usp40Q8BWR4 Mir141-201ENSMUST00000083540 72 ntBASIC0.05□□□□□ -2.4
Usp40Q8BWR4 Gm24646-201ENSMUST00000157109 99 ntBASIC0.03□□□□□ -2.4
Usp40Q8BWR4 Gm25472-201ENSMUST00000175454 78 ntBASIC0.03□□□□□ -2.4
Usp40Q8BWR4 Mir6957-201ENSMUST00000183708 64 ntBASIC0.03□□□□□ -2.4
Usp40Q8BWR4 Gm22813-201ENSMUST00000199948 123 ntBASIC0.03□□□□□ -2.4
Usp40Q8BWR4 Gm25703-201ENSMUST00000083123 151 ntBASIC0.03□□□□□ -2.4
Usp40Q8BWR4 Gm22324-201ENSMUST00000158903 114 ntBASIC0.02□□□□□ -2.41
Usp40Q8BWR4 Gm25032-201ENSMUST00000175411 84 ntBASIC0.02□□□□□ -2.41
Usp40Q8BWR4 Mir7038-201ENSMUST00000184833 71 ntBASIC0.02□□□□□ -2.41
Usp40Q8BWR4 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Usp40Q8BWR4 Mir1839-201ENSMUST00000175366 127 ntBASIC0.01□□□□□ -2.41
Usp40Q8BWR4 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.01□□□□□ -2.41
Usp40Q8BWR4 Mir672-201ENSMUST00000102331 100 ntBASIC0□□□□□ -2.41
Usp40Q8BWR4 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.02□□□□□ -2.41
Usp40Q8BWR4 Mir7681-201ENSMUST00000184834 72 ntBASIC-0.02□□□□□ -2.41
Usp40Q8BWR4 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.02□□□□□ -2.41
Usp40Q8BWR4 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.04□□□□□ -2.42
Usp40Q8BWR4 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.04□□□□□ -2.42
Usp40Q8BWR4 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.05□□□□□ -2.42
Usp40Q8BWR4 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.06□□□□□ -2.42
Usp40Q8BWR4 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.07□□□□□ -2.42
Usp40Q8BWR4 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.07□□□□□ -2.42
Usp40Q8BWR4 Mir191-201ENSMUST00000196210 74 ntBASIC-0.07□□□□□ -2.42
Usp40Q8BWR4 Gm24673-201ENSMUST00000116948 124 ntBASIC-0.08□□□□□ -2.42
Usp40Q8BWR4 Gm24502-201ENSMUST00000158453 105 ntBASIC-0.08□□□□□ -2.42
Usp40Q8BWR4 Gm23108-201ENSMUST00000178295 124 ntBASIC-0.08□□□□□ -2.42
Usp40Q8BWR4 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.08□□□□□ -2.42
Usp40Q8BWR4 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.08□□□□□ -2.42
Usp40Q8BWR4 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.08□□□□□ -2.42
Usp40Q8BWR4 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.09□□□□□ -2.42
Usp40Q8BWR4 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.1□□□□□ -2.43
Usp40Q8BWR4 Mir192-201ENSMUST00000083589 89 ntBASIC-0.1□□□□□ -2.43
Usp40Q8BWR4 Gm23125-201ENSMUST00000157651 106 ntBASIC-0.11□□□□□ -2.43
Usp40Q8BWR4 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.11□□□□□ -2.43
Usp40Q8BWR4 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.11□□□□□ -2.43
Usp40Q8BWR4 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.12□□□□□ -2.43
Usp40Q8BWR4 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.12□□□□□ -2.43
Usp40Q8BWR4 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0.12□□□□□ -2.43
Usp40Q8BWR4 Gm26472-201ENSMUST00000116760 83 ntBASIC-0.13□□□□□ -2.43
Usp40Q8BWR4 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.13□□□□□ -2.43
Usp40Q8BWR4 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.13□□□□□ -2.43
Usp40Q8BWR4 Mir539-201ENSMUST00000102109 74 ntBASIC-0.14□□□□□ -2.43
Usp40Q8BWR4 Gm25143-201ENSMUST00000082696 109 ntBASIC-0.14□□□□□ -2.43
Usp40Q8BWR4 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.14□□□□□ -2.43
Usp40Q8BWR4 Mir96-201ENSMUST00000083652 106 ntBASIC-0.14□□□□□ -2.43
Usp40Q8BWR4 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.15□□□□□ -2.43
Usp40Q8BWR4 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.15□□□□□ -2.43
Usp40Q8BWR4 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.16□□□□□ -2.44
Usp40Q8BWR4 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.16□□□□□ -2.44
Usp40Q8BWR4 Mir1969-201ENSMUST00000157623 94 ntBASIC-0.17□□□□□ -2.44
Usp40Q8BWR4 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.19□□□□□ -2.44
Usp40Q8BWR4 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.19□□□□□ -2.44
Usp40Q8BWR4 Mir677-202ENSMUST00000197076 78 ntBASIC-0.19□□□□□ -2.44
Usp40Q8BWR4 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.2□□□□□ -2.44
Usp40Q8BWR4 Gm23543-201ENSMUST00000158207 106 ntBASIC-0.2□□□□□ -2.44
Usp40Q8BWR4 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.21□□□□□ -2.44
Usp40Q8BWR4 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.21□□□□□ -2.44
Usp40Q8BWR4 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.22□□□□□ -2.44
Usp40Q8BWR4 Mir214-201ENSMUST00000083582 110 ntBASIC-0.22□□□□□ -2.44
Usp40Q8BWR4 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.23□□□□□ -2.45
Usp40Q8BWR4 Gm24775-201ENSMUST00000157377 99 ntBASIC-0.24□□□□□ -2.45
Usp40Q8BWR4 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.24□□□□□ -2.45
Usp40Q8BWR4 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.24□□□□□ -2.45
Usp40Q8BWR4 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.25□□□□□ -2.45
Usp40Q8BWR4 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.26□□□□□ -2.45
Usp40Q8BWR4 Gm22313-201ENSMUST00000158008 129 ntBASIC-0.27□□□□□ -2.45
Usp40Q8BWR4 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.27□□□□□ -2.45
Usp40Q8BWR4 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.29□□□□□ -2.46
Usp40Q8BWR4 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.29□□□□□ -2.46
Usp40Q8BWR4 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.29□□□□□ -2.46
Usp40Q8BWR4 Gm26124-201ENSMUST00000083359 108 ntBASIC-0.29□□□□□ -2.46
Usp40Q8BWR4 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.3□□□□□ -2.46
Usp40Q8BWR4 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.3□□□□□ -2.46
Usp40Q8BWR4 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.31□□□□□ -2.46
Usp40Q8BWR4 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.32□□□□□ -2.46
Usp40Q8BWR4 Gm25493-201ENSMUST00000157375 103 ntBASIC-0.32□□□□□ -2.46
Usp40Q8BWR4 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.32□□□□□ -2.46
Usp40Q8BWR4 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.35□□□□□ -2.47
Usp40Q8BWR4 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.35□□□□□ -2.47
Usp40Q8BWR4 Snord123-201ENSMUST00000158692 71 ntBASIC-0.35□□□□□ -2.47
Usp40Q8BWR4 Mir664-201ENSMUST00000196796 69 ntBASIC-0.35□□□□□ -2.47
Usp40Q8BWR4 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.35□□□□□ -2.47
Usp40Q8BWR4 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 162.6 ms