Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.39□□□□□ -2.47
Shmt1P50431 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Shmt1P50431 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.41□□□□□ -2.48
Shmt1P50431 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.41□□□□□ -2.48
Shmt1P50431 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.41□□□□□ -2.48
Shmt1P50431 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.42□□□□□ -2.48
Shmt1P50431 Mir1955-201ENSMUST00000158014 98 ntBASIC-0.42□□□□□ -2.48
Shmt1P50431 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.42□□□□□ -2.48
Shmt1P50431 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.42□□□□□ -2.48
Shmt1P50431 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.43□□□□□ -2.48
Shmt1P50431 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.43□□□□□ -2.48
Shmt1P50431 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.44□□□□□ -2.48
Shmt1P50431 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.46□□□□□ -2.48
Shmt1P50431 Gm25225-201ENSMUST00000158197 102 ntBASIC-0.47□□□□□ -2.48
Shmt1P50431 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.47□□□□□ -2.48
Shmt1P50431 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.47□□□□□ -2.48
Shmt1P50431 Gm26259-201ENSMUST00000104778 97 ntBASIC-0.48□□□□□ -2.49
Shmt1P50431 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.49□□□□□ -2.49
Shmt1P50431 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.5□□□□□ -2.49
Shmt1P50431 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.5□□□□□ -2.49
Shmt1P50431 Gm22127-201ENSMUST00000083239 106 ntBASIC-0.5□□□□□ -2.49
Shmt1P50431 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-0.5□□□□□ -2.49
Shmt1P50431 Mir295-201ENSMUST00000104694 69 ntBASIC-0.51□□□□□ -2.49
Shmt1P50431 Gm22197-201ENSMUST00000116866 58 ntBASIC-0.52□□□□□ -2.49
Shmt1P50431 Mir297b-201ENSMUST00000102268 109 ntBASIC-0.53□□□□□ -2.49
Shmt1P50431 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.53□□□□□ -2.49
Shmt1P50431 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.53□□□□□ -2.49
Shmt1P50431 Gm25023-201ENSMUST00000082977 107 ntBASIC-0.53□□□□□ -2.49
Shmt1P50431 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.54□□□□□ -2.5
Shmt1P50431 Mir677-202ENSMUST00000197076 78 ntBASIC-0.54□□□□□ -2.5
Shmt1P50431 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.54□□□□□ -2.5
Shmt1P50431 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.55□□□□□ -2.5
Shmt1P50431 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.55□□□□□ -2.5
Shmt1P50431 Gm24651-201ENSMUST00000157107 107 ntBASIC-0.55□□□□□ -2.5
Shmt1P50431 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.56□□□□□ -2.5
Shmt1P50431 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.56□□□□□ -2.5
Shmt1P50431 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.56□□□□□ -2.5
Shmt1P50431 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.56□□□□□ -2.5
Shmt1P50431 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.57□□□□□ -2.5
Shmt1P50431 Gm25995-201ENSMUST00000175396 142 ntBASIC-0.57□□□□□ -2.5
Shmt1P50431 Gm22260-201ENSMUST00000178643 107 ntBASIC-0.58□□□□□ -2.5
Shmt1P50431 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.58□□□□□ -2.5
Shmt1P50431 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.58□□□□□ -2.5
Shmt1P50431 Mir125b-1-201ENSMUST00000175613 77 ntBASIC-0.59□□□□□ -2.5
Shmt1P50431 AC160976.1-201ENSMUST00000215092 148 ntBASIC-0.59□□□□□ -2.5
Shmt1P50431 Mir183-201ENSMUST00000083685 70 ntBASIC-0.59□□□□□ -2.5
Shmt1P50431 Mir466q-201ENSMUST00000175249 76 ntBASIC-0.6□□□□□ -2.51
Shmt1P50431 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.6□□□□□ -2.51
Shmt1P50431 Gm22056-201ENSMUST00000083386 81 ntBASIC-0.61□□□□□ -2.51
Shmt1P50431 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-0.61□□□□□ -2.51
Shmt1P50431 Gm44347-201ENSMUST00000199602 108 ntBASIC-0.62□□□□□ -2.51
Shmt1P50431 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.63□□□□□ -2.51
Shmt1P50431 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.63□□□□□ -2.51
Shmt1P50431 Gm26262-201ENSMUST00000158024 127 ntBASIC-0.64□□□□□ -2.51
Shmt1P50431 Gm24003-201ENSMUST00000158455 100 ntBASIC-0.64□□□□□ -2.51
Shmt1P50431 Mir367-201ENSMUST00000083479 75 ntBASIC-0.64□□□□□ -2.51
Shmt1P50431 Gm23308-201ENSMUST00000179475 107 ntBASIC-0.65□□□□□ -2.51
Shmt1P50431 Gm24097-201ENSMUST00000178720 107 ntBASIC-0.67□□□□□ -2.52
Shmt1P50431 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.67□□□□□ -2.52
Shmt1P50431 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.68□□□□□ -2.52
Shmt1P50431 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.68□□□□□ -2.52
Shmt1P50431 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.68□□□□□ -2.52
Shmt1P50431 Mir1969-201ENSMUST00000157623 94 ntBASIC-0.69□□□□□ -2.52
Shmt1P50431 Gm24372-201ENSMUST00000104400 110 ntBASIC-0.7□□□□□ -2.52
Shmt1P50431 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.7□□□□□ -2.52
Shmt1P50431 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.71□□□□□ -2.52
Shmt1P50431 Gm23166-201ENSMUST00000157164 101 ntBASIC-0.71□□□□□ -2.52
Shmt1P50431 Gm22301-201ENSMUST00000082656 107 ntBASIC-0.71□□□□□ -2.52
Shmt1P50431 Gm26306-201ENSMUST00000157773 119 ntBASIC-0.72□□□□□ -2.52
Shmt1P50431 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.72□□□□□ -2.52
Shmt1P50431 Gm27610-201ENSMUST00000184026 74 ntBASIC-0.72□□□□□ -2.52
Shmt1P50431 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-0.72□□□□□ -2.52
Shmt1P50431 Gm23811-201ENSMUST00000175155 84 ntBASIC-0.73□□□□□ -2.53
Shmt1P50431 Gm22602-201ENSMUST00000157596 95 ntBASIC-0.74□□□□□ -2.53
Shmt1P50431 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.74□□□□□ -2.53
Shmt1P50431 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.74□□□□□ -2.53
Shmt1P50431 AC122210.2-201ENSMUST00000220216 115 ntBASIC-0.75□□□□□ -2.53
Shmt1P50431 Gm23831-201ENSMUST00000158895 85 ntBASIC-0.76□□□□□ -2.53
Shmt1P50431 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.76□□□□□ -2.53
Shmt1P50431 Gm24673-201ENSMUST00000116948 124 ntBASIC-0.77□□□□□ -2.53
Shmt1P50431 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.77□□□□□ -2.53
Shmt1P50431 Gm23108-201ENSMUST00000178295 124 ntBASIC-0.77□□□□□ -2.53
Shmt1P50431 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.78□□□□□ -2.53
Shmt1P50431 Gm25429-201ENSMUST00000157607 132 ntBASIC-0.78□□□□□ -2.53
Shmt1P50431 Gm24296-201ENSMUST00000158297 106 ntBASIC-0.78□□□□□ -2.53
Shmt1P50431 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.79□□□□□ -2.54
Shmt1P50431 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.8□□□□□ -2.54
Shmt1P50431 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.8□□□□□ -2.54
Shmt1P50431 Gm25493-201ENSMUST00000157375 103 ntBASIC-0.81□□□□□ -2.54
Shmt1P50431 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.81□□□□□ -2.54
Shmt1P50431 Gm22550-201ENSMUST00000179774 107 ntBASIC-0.81□□□□□ -2.54
Shmt1P50431 Mir28c-201ENSMUST00000200096 75 ntBASIC-0.81□□□□□ -2.54
Shmt1P50431 Gm26227-201ENSMUST00000082510 101 ntBASIC-0.81□□□□□ -2.54
Shmt1P50431 Gm22060-201ENSMUST00000082558 107 ntBASIC-0.81□□□□□ -2.54
Shmt1P50431 Gm24704-201ENSMUST00000093715 107 ntBASIC-0.81□□□□□ -2.54
Shmt1P50431 Mir574-201ENSMUST00000103854 78 ntBASIC-0.83□□□□□ -2.54
Shmt1P50431 Mir6961-201ENSMUST00000183874 67 ntBASIC-0.84□□□□□ -2.54
Shmt1P50431 Gm24051-201ENSMUST00000158622 75 ntBASIC-0.85□□□□□ -2.55
Shmt1P50431 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.85□□□□□ -2.55
Shmt1P50431 Gm25132-201ENSMUST00000082652 107 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms