Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm24296-201ENSMUST00000158297 106 ntBASIC0.47□□□□□ -2.33
Col18a1P39061 Gm28001-201ENSMUST00000183561 117 ntBASIC0.47□□□□□ -2.33
Col18a1P39061 Gm26116-201ENSMUST00000175600 77 ntBASIC0.46□□□□□ -2.34
Col18a1P39061 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.46□□□□□ -2.34
Col18a1P39061 Scarna8-201ENSMUST00000158333 131 ntBASIC0.45□□□□□ -2.34
Col18a1P39061 Mir191-201ENSMUST00000196210 74 ntBASIC0.45□□□□□ -2.34
Col18a1P39061 Mir3967-201ENSMUST00000198710 68 ntBASIC0.45□□□□□ -2.34
Col18a1P39061 Snord42b-201ENSMUST00000083742 69 ntBASIC0.44□□□□□ -2.34
Col18a1P39061 Gm23821-201ENSMUST00000158738 106 ntBASIC0.43□□□□□ -2.34
Col18a1P39061 Mir6365-201ENSMUST00000183990 101 ntBASIC0.43□□□□□ -2.34
Col18a1P39061 Gm44328-201ENSMUST00000199331 75 ntBASIC0.43□□□□□ -2.34
Col18a1P39061 Mir367-201ENSMUST00000083479 75 ntBASIC0.42□□□□□ -2.34
Col18a1P39061 Gm23556-201ENSMUST00000157821 92 ntBASIC0.41□□□□□ -2.34
Col18a1P39061 Mir1839-201ENSMUST00000175366 127 ntBASIC0.41□□□□□ -2.34
Col18a1P39061 AC122210.2-201ENSMUST00000220216 115 ntBASIC0.4□□□□□ -2.35
Col18a1P39061 Gm25143-201ENSMUST00000082696 109 ntBASIC0.4□□□□□ -2.35
Col18a1P39061 Gm26152-201ENSMUST00000157427 101 ntBASIC0.4□□□□□ -2.35
Col18a1P39061 Gm25249-201ENSMUST00000175471 78 ntBASIC0.4□□□□□ -2.35
Col18a1P39061 Gm25772-201ENSMUST00000158574 56 ntBASIC0.39□□□□□ -2.35
Col18a1P39061 Mir664-201ENSMUST00000196796 69 ntBASIC0.39□□□□□ -2.35
Col18a1P39061 Mir136-201ENSMUST00000199494 62 ntBASIC0.39□□□□□ -2.35
Col18a1P39061 AC167019.1-201ENSMUST00000227913 106 ntBASIC0.39□□□□□ -2.35
Col18a1P39061 Gm22489-201ENSMUST00000116813 62 ntBASIC0.38□□□□□ -2.35
Col18a1P39061 Mir1969-201ENSMUST00000157623 94 ntBASIC0.38□□□□□ -2.35
Col18a1P39061 Mir1912-201ENSMUST00000175298 87 ntBASIC0.37□□□□□ -2.35
Col18a1P39061 Gm25248-201ENSMUST00000175473 98 ntBASIC0.37□□□□□ -2.35
Col18a1P39061 Mir6957-201ENSMUST00000183708 64 ntBASIC0.37□□□□□ -2.35
Col18a1P39061 Gm44589-201ENSMUST00000207025 115 ntBASIC0.37□□□□□ -2.35
Col18a1P39061 Gm27475-201ENSMUST00000183420 61 ntBASIC0.36□□□□□ -2.35
Col18a1P39061 Gm25596-201ENSMUST00000178368 107 ntBASIC0.34□□□□□ -2.36
Col18a1P39061 Gm25137-201ENSMUST00000083251 110 ntBASIC0.34□□□□□ -2.36
Col18a1P39061 Gm22962-201ENSMUST00000157962 73 ntBASIC0.33□□□□□ -2.36
Col18a1P39061 Gm24673-201ENSMUST00000116948 124 ntBASIC0.32□□□□□ -2.36
Col18a1P39061 Gm23543-201ENSMUST00000158207 106 ntBASIC0.32□□□□□ -2.36
Col18a1P39061 Gm23108-201ENSMUST00000178295 124 ntBASIC0.32□□□□□ -2.36
Col18a1P39061 Gm24336-201ENSMUST00000104203 146 ntBASIC0.32□□□□□ -2.36
Col18a1P39061 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Col18a1P39061 Gm22327-201ENSMUST00000158899 108 ntBASIC0.32□□□□□ -2.36
Col18a1P39061 Gm26262-201ENSMUST00000158024 127 ntBASIC0.31□□□□□ -2.36
Col18a1P39061 Gm24003-201ENSMUST00000158455 100 ntBASIC0.3□□□□□ -2.36
Col18a1P39061 Snord85-201ENSMUST00000083262 73 ntBASIC0.3□□□□□ -2.36
Col18a1P39061 Mir29b-1-201ENSMUST00000083670 71 ntBASIC0.3□□□□□ -2.36
Col18a1P39061 Gm44375-201ENSMUST00000196657 150 ntBASIC0.29□□□□□ -2.36
Col18a1P39061 Mir8107-201ENSMUST00000184024 117 ntBASIC0.27□□□□□ -2.37
Col18a1P39061 Gm25225-201ENSMUST00000158197 102 ntBASIC0.27□□□□□ -2.37
Col18a1P39061 Gm24455-201ENSMUST00000083348 131 ntBASIC0.27□□□□□ -2.37
Col18a1P39061 Gm25429-201ENSMUST00000157607 132 ntBASIC0.26□□□□□ -2.37
Col18a1P39061 Snord49b-201ENSMUST00000082503 72 ntBASIC0.26□□□□□ -2.37
Col18a1P39061 Mir192-201ENSMUST00000083589 89 ntBASIC0.26□□□□□ -2.37
Col18a1P39061 Gm25472-201ENSMUST00000175454 78 ntBASIC0.25□□□□□ -2.37
Col18a1P39061 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.25□□□□□ -2.37
Col18a1P39061 Gm22783-201ENSMUST00000104089 107 ntBASIC0.24□□□□□ -2.37
Col18a1P39061 Gm23904-201ENSMUST00000157567 124 ntBASIC0.24□□□□□ -2.37
Col18a1P39061 Gm27735-201ENSMUST00000185085 76 ntBASIC0.24□□□□□ -2.37
Col18a1P39061 Gm25712-201ENSMUST00000158634 93 ntBASIC0.23□□□□□ -2.37
Col18a1P39061 Mir466b-2-201ENSMUST00000103778 82 ntBASIC0.22□□□□□ -2.37
Col18a1P39061 n-R5s171-201ENSMUST00000104128 79 ntBASIC0.22□□□□□ -2.37
Col18a1P39061 Gm24833-201ENSMUST00000116775 120 ntBASIC0.22□□□□□ -2.37
Col18a1P39061 Gm24256-201ENSMUST00000083696 84 ntBASIC0.22□□□□□ -2.37
Col18a1P39061 Gm22573-201ENSMUST00000082982 102 ntBASIC0.22□□□□□ -2.37
Col18a1P39061 Mir539-201ENSMUST00000102109 74 ntBASIC0.2□□□□□ -2.38
Col18a1P39061 Mir7094-2-201ENSMUST00000184622 60 ntBASIC0.2□□□□□ -2.38
Col18a1P39061 Mir7094-1-201ENSMUST00000199671 60 ntBASIC0.2□□□□□ -2.38
Col18a1P39061 Gm22313-201ENSMUST00000158008 129 ntBASIC0.19□□□□□ -2.38
Col18a1P39061 Snord16a-201ENSMUST00000083895 99 ntBASIC0.19□□□□□ -2.38
Col18a1P39061 Gm22368-201ENSMUST00000102416 109 ntBASIC0.19□□□□□ -2.38
Col18a1P39061 Gm24775-201ENSMUST00000157377 99 ntBASIC0.19□□□□□ -2.38
Col18a1P39061 Gm22942-201ENSMUST00000158563 124 ntBASIC0.19□□□□□ -2.38
Col18a1P39061 Gm26210-201ENSMUST00000158680 91 ntBASIC0.18□□□□□ -2.38
Col18a1P39061 Gm22324-201ENSMUST00000158903 114 ntBASIC0.18□□□□□ -2.38
Col18a1P39061 Gm26124-201ENSMUST00000083359 108 ntBASIC0.18□□□□□ -2.38
Col18a1P39061 Gm25521-201ENSMUST00000158393 108 ntBASIC0.17□□□□□ -2.38
Col18a1P39061 Mir574-201ENSMUST00000103854 78 ntBASIC0.17□□□□□ -2.38
Col18a1P39061 Gm19248-201ENSMUST00000209404 110 ntBASIC0.17□□□□□ -2.38
Col18a1P39061 Mir7038-201ENSMUST00000184833 71 ntBASIC0.16□□□□□ -2.38
Col18a1P39061 AL845349.1-201ENSMUST00000213794 78 ntBASIC0.16□□□□□ -2.38
Col18a1P39061 Gm24047-201ENSMUST00000102405 104 ntBASIC0.15□□□□□ -2.39
Col18a1P39061 Gm25952-201ENSMUST00000175329 74 ntBASIC0.15□□□□□ -2.39
Col18a1P39061 Gm45374-201ENSMUST00000211388 136 ntBASIC0.12□□□□□ -2.39
Col18a1P39061 Gm25493-201ENSMUST00000157375 103 ntBASIC0.11□□□□□ -2.39
Col18a1P39061 Gm22013-201ENSMUST00000158788 103 ntBASIC0.11□□□□□ -2.39
Col18a1P39061 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Col18a1P39061 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Col18a1P39061 Mir96-201ENSMUST00000083652 106 ntBASIC0.11□□□□□ -2.39
Col18a1P39061 Mir145a-201ENSMUST00000083658 70 ntBASIC0.11□□□□□ -2.39
Col18a1P39061 Gm25601-201ENSMUST00000158356 105 ntBASIC0.1□□□□□ -2.39
Col18a1P39061 Gm25032-201ENSMUST00000175411 84 ntBASIC0.1□□□□□ -2.39
Col18a1P39061 Mir382-201ENSMUST00000083494 76 ntBASIC0.1□□□□□ -2.39
Col18a1P39061 Gm23199-201ENSMUST00000158812 107 ntBASIC0.09□□□□□ -2.39
Col18a1P39061 mt-Ts1-201ENSMUST00000082403 69 ntBASIC0.09□□□□□ -2.39
Col18a1P39061 Mir672-201ENSMUST00000102331 100 ntBASIC0.09□□□□□ -2.4
Col18a1P39061 Mir7057-201ENSMUST00000184685 58 ntBASIC0.09□□□□□ -2.4
Col18a1P39061 Gm24587-201ENSMUST00000116697 89 ntBASIC0.06□□□□□ -2.4
Col18a1P39061 Mir677-202ENSMUST00000197076 78 ntBASIC0.06□□□□□ -2.4
Col18a1P39061 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Col18a1P39061 Gm25254-201ENSMUST00000157239 104 ntBASIC0.05□□□□□ -2.4
Col18a1P39061 Gm24051-201ENSMUST00000158622 75 ntBASIC0.04□□□□□ -2.4
Col18a1P39061 Gm27366-201ENSMUST00000184967 108 ntBASIC0.04□□□□□ -2.4
Col18a1P39061 Gm23166-201ENSMUST00000157164 101 ntBASIC0.04□□□□□ -2.4
Col18a1P39061 Gm22813-201ENSMUST00000199948 123 ntBASIC0.03□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 162.4 ms