Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm27987-201ENSMUST00000184023 93 ntBASIC-1.26□□□□□ -2.61
Cdx1P18111 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
Cdx1P18111 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
Cdx1P18111 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.27□□□□□ -2.61
Cdx1P18111 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.27□□□□□ -2.61
Cdx1P18111 Gm25995-201ENSMUST00000175396 142 ntBASIC-1.27□□□□□ -2.61
Cdx1P18111 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.27□□□□□ -2.61
Cdx1P18111 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.27□□□□□ -2.61
Cdx1P18111 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.27□□□□□ -2.61
Cdx1P18111 Mir367-201ENSMUST00000083479 75 ntBASIC-1.28□□□□□ -2.61
Cdx1P18111 Gm22845-201ENSMUST00000157712 104 ntBASIC-1.3□□□□□ -2.62
Cdx1P18111 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.3□□□□□ -2.62
Cdx1P18111 Gm25815-201ENSMUST00000082755 107 ntBASIC-1.3□□□□□ -2.62
Cdx1P18111 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.31□□□□□ -2.62
Cdx1P18111 Gm25903-201ENSMUST00000158492 103 ntBASIC-1.32□□□□□ -2.62
Cdx1P18111 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.32□□□□□ -2.62
Cdx1P18111 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.32□□□□□ -2.62
Cdx1P18111 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.32□□□□□ -2.62
Cdx1P18111 Gm20305-201ENSMUST00000193226 177 ntBASIC-1.32□□□□□ -2.62
Cdx1P18111 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.32□□□□□ -2.62
Cdx1P18111 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-1.32□□□□□ -2.62
Cdx1P18111 Gm22381-201ENSMUST00000158186 107 ntBASIC-1.33□□□□□ -2.62
Cdx1P18111 Gm23817-201ENSMUST00000158449 104 ntBASIC-1.33□□□□□ -2.62
Cdx1P18111 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.33□□□□□ -2.62
Cdx1P18111 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.33□□□□□ -2.62
Cdx1P18111 Gm22357-201ENSMUST00000082882 83 ntBASIC-1.33□□□□□ -2.62
Cdx1P18111 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.34□□□□□ -2.62
Cdx1P18111 Gm25552-201ENSMUST00000158081 91 ntBASIC-1.34□□□□□ -2.62
Cdx1P18111 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.34□□□□□ -2.62
Cdx1P18111 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.34□□□□□ -2.62
Cdx1P18111 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.34□□□□□ -2.62
Cdx1P18111 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.35□□□□□ -2.63
Cdx1P18111 Gm24495-201ENSMUST00000178575 79 ntBASIC-1.35□□□□□ -2.63
Cdx1P18111 Gm22253-201ENSMUST00000179870 79 ntBASIC-1.35□□□□□ -2.63
Cdx1P18111 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.36□□□□□ -2.63
Cdx1P18111 Gm44347-201ENSMUST00000199602 108 ntBASIC-1.36□□□□□ -2.63
Cdx1P18111 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.36□□□□□ -2.63
Cdx1P18111 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
Cdx1P18111 Mir122-201ENSMUST00000083468 66 ntBASIC-1.37□□□□□ -2.63
Cdx1P18111 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.38□□□□□ -2.63
Cdx1P18111 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.38□□□□□ -2.63
Cdx1P18111 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.38□□□□□ -2.63
Cdx1P18111 Gm22783-201ENSMUST00000104089 107 ntBASIC-1.39□□□□□ -2.63
Cdx1P18111 Gm23652-201ENSMUST00000116752 107 ntBASIC-1.39□□□□□ -2.63
Cdx1P18111 Gm25428-201ENSMUST00000157608 114 ntBASIC-1.39□□□□□ -2.63
Cdx1P18111 Mir1950-201ENSMUST00000158526 74 ntBASIC-1.39□□□□□ -2.63
Cdx1P18111 Gm22602-201ENSMUST00000157596 95 ntBASIC-1.4□□□□□ -2.63
Cdx1P18111 Gm27366-201ENSMUST00000184967 108 ntBASIC-1.4□□□□□ -2.63
Cdx1P18111 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.41□□□□□ -2.64
Cdx1P18111 Gm23730-201ENSMUST00000083236 107 ntBASIC-1.41□□□□□ -2.64
Cdx1P18111 Mir192-201ENSMUST00000083589 89 ntBASIC-1.41□□□□□ -2.64
Cdx1P18111 Gm24259-201ENSMUST00000083740 107 ntBASIC-1.41□□□□□ -2.64
Cdx1P18111 Gm24723-201ENSMUST00000158233 132 ntBASIC-1.42□□□□□ -2.64
Cdx1P18111 CT571266.1-201ENSMUST00000222859 153 ntBASIC-1.42□□□□□ -2.64
Cdx1P18111 Gm24097-201ENSMUST00000178720 107 ntBASIC-1.43□□□□□ -2.64
Cdx1P18111 Gm25023-201ENSMUST00000082977 107 ntBASIC-1.43□□□□□ -2.64
Cdx1P18111 Gm23811-201ENSMUST00000175155 84 ntBASIC-1.44□□□□□ -2.64
Cdx1P18111 Mir28c-201ENSMUST00000200096 75 ntBASIC-1.44□□□□□ -2.64
Cdx1P18111 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.45□□□□□ -2.64
Cdx1P18111 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.45□□□□□ -2.64
Cdx1P18111 Mir539-201ENSMUST00000102109 74 ntBASIC-1.46□□□□□ -2.64
Cdx1P18111 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
Cdx1P18111 Gm23992-201ENSMUST00000174981 67 ntBASIC-1.46□□□□□ -2.64
Cdx1P18111 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.47□□□□□ -2.64
Cdx1P18111 Snord50a-201ENSMUST00000178154 72 ntBASIC-1.47□□□□□ -2.64
Cdx1P18111 Gm24463-201ENSMUST00000178417 72 ntBASIC-1.47□□□□□ -2.64
Cdx1P18111 Gm22251-201ENSMUST00000083216 107 ntBASIC-1.47□□□□□ -2.64
Cdx1P18111 Mir295-201ENSMUST00000104694 69 ntBASIC-1.48□□□□□ -2.65
Cdx1P18111 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.48□□□□□ -2.65
Cdx1P18111 Mir466q-201ENSMUST00000175249 76 ntBASIC-1.48□□□□□ -2.65
Cdx1P18111 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.48□□□□□ -2.65
Cdx1P18111 Gm23653-201ENSMUST00000116751 97 ntBASIC-1.49□□□□□ -2.65
Cdx1P18111 Gm24482-201ENSMUST00000117005 93 ntBASIC-1.49□□□□□ -2.65
Cdx1P18111 Gm25183-201ENSMUST00000157752 106 ntBASIC-1.49□□□□□ -2.65
Cdx1P18111 Gm24797-201ENSMUST00000178103 107 ntBASIC-1.49□□□□□ -2.65
Cdx1P18111 Mir379-201ENSMUST00000083564 66 ntBASIC-1.49□□□□□ -2.65
Cdx1P18111 Gm23038-201ENSMUST00000083873 104 ntBASIC-1.49□□□□□ -2.65
Cdx1P18111 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.5□□□□□ -2.65
Cdx1P18111 Gm25779-201ENSMUST00000116710 95 ntBASIC-1.5□□□□□ -2.65
Cdx1P18111 Gm24297-201ENSMUST00000158300 68 ntBASIC-1.5□□□□□ -2.65
Cdx1P18111 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.51□□□□□ -2.65
Cdx1P18111 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.51□□□□□ -2.65
Cdx1P18111 Gm24586-201ENSMUST00000116695 89 ntBASIC-1.53□□□□□ -2.65
Cdx1P18111 Gm22950-201ENSMUST00000082776 107 ntBASIC-1.53□□□□□ -2.65
Cdx1P18111 Gm24410-201ENSMUST00000083433 107 ntBASIC-1.53□□□□□ -2.65
Cdx1P18111 Gm24226-201ENSMUST00000158826 97 ntBASIC-1.54□□□□□ -2.66
Cdx1P18111 Gm27450-201ENSMUST00000104632 90 ntBASIC-1.55□□□□□ -2.66
Cdx1P18111 Gm11966-201ENSMUST00000119907 87 ntBASIC-1.55□□□□□ -2.66
Cdx1P18111 Gm23787-201ENSMUST00000122538 73 ntBASIC-1.56□□□□□ -2.66
Cdx1P18111 Gm24646-201ENSMUST00000157109 99 ntBASIC-1.56□□□□□ -2.66
Cdx1P18111 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.56□□□□□ -2.66
Cdx1P18111 Gm26052-201ENSMUST00000104646 84 ntBASIC-1.57□□□□□ -2.66
Cdx1P18111 Gm22313-201ENSMUST00000158008 129 ntBASIC-1.57□□□□□ -2.66
Cdx1P18111 Gm23785-201ENSMUST00000116741 96 ntBASIC-1.58□□□□□ -2.66
Cdx1P18111 AC157278.1-201ENSMUST00000221621 148 ntBASIC-1.58□□□□□ -2.66
Cdx1P18111 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.58□□□□□ -2.66
Cdx1P18111 Gm26472-201ENSMUST00000116760 83 ntBASIC-1.59□□□□□ -2.66
Cdx1P18111 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.59□□□□□ -2.66
Cdx1P18111 Gm23293-201ENSMUST00000082552 104 ntBASIC-1.59□□□□□ -2.66
Cdx1P18111 Gm44932-201ENSMUST00000206799 121 ntBASIC-1.6□□□□□ -2.67
Retrieved 100 of 76,532 protein–RNA pairs in 175.5 ms