Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Mir7055-201ENSMUST00000197423 59 ntBASIC-1.59□□□□□ -2.66
Trav13n-4A0A0G2JG01 Gm22950-201ENSMUST00000082776 107 ntBASIC-1.59□□□□□ -2.66
Trav13n-4A0A0G2JG01 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.6□□□□□ -2.67
Trav13n-4A0A0G2JG01 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.62□□□□□ -2.67
Trav13n-4A0A0G2JG01 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.62□□□□□ -2.67
Trav13n-4A0A0G2JG01 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.62□□□□□ -2.67
Trav13n-4A0A0G2JG01 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.63□□□□□ -2.67
Trav13n-4A0A0G2JG01 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.63□□□□□ -2.67
Trav13n-4A0A0G2JG01 Mir1187-201ENSMUST00000116936 122 ntBASIC-1.64□□□□□ -2.67
Trav13n-4A0A0G2JG01 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.64□□□□□ -2.67
Trav13n-4A0A0G2JG01 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.64□□□□□ -2.67
Trav13n-4A0A0G2JG01 Gm23376-201ENSMUST00000082938 160 ntBASIC-1.65□□□□□ -2.67
Trav13n-4A0A0G2JG01 Gm25847-201ENSMUST00000116793 96 ntBASIC-1.66□□□□□ -2.68
Trav13n-4A0A0G2JG01 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.66□□□□□ -2.68
Trav13n-4A0A0G2JG01 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.66□□□□□ -2.68
Trav13n-4A0A0G2JG01 Mir494-201ENSMUST00000093632 85 ntBASIC-1.66□□□□□ -2.68
Trav13n-4A0A0G2JG01 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.67□□□□□ -2.68
Trav13n-4A0A0G2JG01 Gm44932-201ENSMUST00000206799 121 ntBASIC-1.68□□□□□ -2.68
Trav13n-4A0A0G2JG01 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.69□□□□□ -2.68
Trav13n-4A0A0G2JG01 AC238676.2-201ENSMUST00000220910 94 ntBASIC-1.69□□□□□ -2.68
Trav13n-4A0A0G2JG01 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.7□□□□□ -2.68
Trav13n-4A0A0G2JG01 Gm20305-201ENSMUST00000193226 177 ntBASIC-1.7□□□□□ -2.68
Trav13n-4A0A0G2JG01 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.7□□□□□ -2.68
Trav13n-4A0A0G2JG01 Snord123-201ENSMUST00000158692 71 ntBASIC-1.71□□□□□ -2.68
Trav13n-4A0A0G2JG01 Gm25681-201ENSMUST00000083938 106 ntBASIC-1.72□□□□□ -2.68
Trav13n-4A0A0G2JG01 Mir543-201ENSMUST00000102286 76 ntBASIC-1.73□□□□□ -2.69
Trav13n-4A0A0G2JG01 Gm26257-201ENSMUST00000122500 107 ntBASIC-1.73□□□□□ -2.69
Trav13n-4A0A0G2JG01 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.74□□□□□ -2.69
Trav13n-4A0A0G2JG01 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
Trav13n-4A0A0G2JG01 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.74□□□□□ -2.69
Trav13n-4A0A0G2JG01 Gm43206-201ENSMUST00000197990 114 ntBASIC-1.74□□□□□ -2.69
Trav13n-4A0A0G2JG01 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.74□□□□□ -2.69
Trav13n-4A0A0G2JG01 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.75□□□□□ -2.69
Trav13n-4A0A0G2JG01 Gm24378-201ENSMUST00000122699 106 ntBASIC-1.76□□□□□ -2.69
Trav13n-4A0A0G2JG01 Gm22095-201ENSMUST00000158984 150 ntBASIC-1.77□□□□□ -2.69
Trav13n-4A0A0G2JG01 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.77□□□□□ -2.69
Trav13n-4A0A0G2JG01 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.78□□□□□ -2.69
Trav13n-4A0A0G2JG01 Gm25648-201ENSMUST00000177844 79 ntBASIC-1.79□□□□□ -2.7
Trav13n-4A0A0G2JG01 Gm23856-201ENSMUST00000158380 99 ntBASIC-1.8□□□□□ -2.7
Trav13n-4A0A0G2JG01 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.82□□□□□ -2.7
Trav13n-4A0A0G2JG01 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.82□□□□□ -2.7
Trav13n-4A0A0G2JG01 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.83□□□□□ -2.7
Trav13n-4A0A0G2JG01 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.83□□□□□ -2.7
Trav13n-4A0A0G2JG01 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.84□□□□□ -2.7
Trav13n-4A0A0G2JG01 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.85□□□□□ -2.71
Trav13n-4A0A0G2JG01 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.85□□□□□ -2.71
Trav13n-4A0A0G2JG01 Gm24331-201ENSMUST00000175099 67 ntBASIC-1.86□□□□□ -2.71
Trav13n-4A0A0G2JG01 Gm23801-201ENSMUST00000175561 67 ntBASIC-1.86□□□□□ -2.71
Trav13n-4A0A0G2JG01 Gm24485-201ENSMUST00000178283 67 ntBASIC-1.86□□□□□ -2.71
Trav13n-4A0A0G2JG01 Gm22746-201ENSMUST00000082494 107 ntBASIC-1.87□□□□□ -2.71
Trav13n-4A0A0G2JG01 Gm26051-201ENSMUST00000104642 93 ntBASIC-1.89□□□□□ -2.71
Trav13n-4A0A0G2JG01 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.91□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm22965-201ENSMUST00000157958 101 ntBASIC-1.91□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm23649-201ENSMUST00000179007 107 ntBASIC-1.92□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm24927-201ENSMUST00000083397 107 ntBASIC-1.92□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.93□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm37646-201ENSMUST00000191756 111 ntBASIC-1.93□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.94□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm25382-201ENSMUST00000157811 97 ntBASIC-1.95□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm26485-201ENSMUST00000158019 64 ntBASIC-1.96□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.96□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm22566-201ENSMUST00000175541 85 ntBASIC-1.96□□□□□ -2.72
Trav13n-4A0A0G2JG01 Gm24996-201ENSMUST00000158390 99 ntBASIC-1.97□□□□□ -2.72
Trav13n-4A0A0G2JG01 Mir367-201ENSMUST00000083479 75 ntBASIC-1.99□□□□□ -2.73
Trav13n-4A0A0G2JG01 Gm22679-201ENSMUST00000116975 100 ntBASIC-2□□□□□ -2.73
Trav13n-4A0A0G2JG01 AC122210.2-201ENSMUST00000220216 115 ntBASIC-2□□□□□ -2.73
Trav13n-4A0A0G2JG01 Gm23730-201ENSMUST00000083236 107 ntBASIC-2□□□□□ -2.73
Trav13n-4A0A0G2JG01 Gm25903-201ENSMUST00000158492 103 ntBASIC-2.01□□□□□ -2.73
Trav13n-4A0A0G2JG01 Gm24259-201ENSMUST00000083740 107 ntBASIC-2.01□□□□□ -2.73
Trav13n-4A0A0G2JG01 Gm23316-201ENSMUST00000157997 114 ntBASIC-2.02□□□□□ -2.73
Trav13n-4A0A0G2JG01 Gm11966-201ENSMUST00000119907 87 ntBASIC-2.04□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm25183-201ENSMUST00000157752 106 ntBASIC-2.04□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm25626-201ENSMUST00000177631 107 ntBASIC-2.05□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm23293-201ENSMUST00000082552 104 ntBASIC-2.05□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm22357-201ENSMUST00000082882 83 ntBASIC-2.06□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm24673-201ENSMUST00000116948 124 ntBASIC-2.07□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm23108-201ENSMUST00000178295 124 ntBASIC-2.07□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm23817-201ENSMUST00000158449 104 ntBASIC-2.08□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm25995-201ENSMUST00000175396 142 ntBASIC-2.08□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm24797-201ENSMUST00000178103 107 ntBASIC-2.08□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm24297-201ENSMUST00000158300 68 ntBASIC-2.09□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-2.09□□□□□ -2.74
Trav13n-4A0A0G2JG01 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-2.09□□□□□ -2.74
Trav13n-4A0A0G2JG01 AC157278.1-201ENSMUST00000221621 148 ntBASIC-2.1□□□□□ -2.75
Trav13n-4A0A0G2JG01 Gm25905-201ENSMUST00000158490 101 ntBASIC-2.11□□□□□ -2.75
Trav13n-4A0A0G2JG01 Gm25552-201ENSMUST00000158081 91 ntBASIC-2.13□□□□□ -2.75
Trav13n-4A0A0G2JG01 Gm27450-201ENSMUST00000104632 90 ntBASIC-2.15□□□□□ -2.75
Trav13n-4A0A0G2JG01 Gm24723-201ENSMUST00000158233 132 ntBASIC-2.16□□□□□ -2.76
Trav13n-4A0A0G2JG01 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC-2.16□□□□□ -2.76
Trav13n-4A0A0G2JG01 Gm24097-201ENSMUST00000178720 107 ntBASIC-2.18□□□□□ -2.76
Trav13n-4A0A0G2JG01 Gm23785-201ENSMUST00000116741 96 ntBASIC-2.2□□□□□ -2.76
Trav13n-4A0A0G2JG01 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.2□□□□□ -2.76
Trav13n-4A0A0G2JG01 Gm22464-201ENSMUST00000175273 64 ntBASIC-2.2□□□□□ -2.76
Trav13n-4A0A0G2JG01 Mir451b-201ENSMUST00000196157 72 ntBASIC-2.2□□□□□ -2.76
Trav13n-4A0A0G2JG01 Gm23992-201ENSMUST00000174981 67 ntBASIC-2.22□□□□□ -2.76
Trav13n-4A0A0G2JG01 Gm44347-201ENSMUST00000199602 108 ntBASIC-2.23□□□□□ -2.77
Trav13n-4A0A0G2JG01 mt-Tl2-201ENSMUST00000082417 71 ntBASIC-2.24□□□□□ -2.77
Trav13n-4A0A0G2JG01 Gm25023-201ENSMUST00000082977 107 ntBASIC-2.24□□□□□ -2.77
Trav13n-4A0A0G2JG01 Gm26139-201ENSMUST00000180098 107 ntBASIC-2.25□□□□□ -2.77
Trav13n-4A0A0G2JG01 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC-2.26□□□□□ -2.77
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms