Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm27415-201ENSMUST00000183720 95 ntBASIC-0.7□□□□□ -2.52
Trim54Q9ERP3 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.7□□□□□ -2.52
Trim54Q9ERP3 Gm22950-201ENSMUST00000082776 107 ntBASIC-0.7□□□□□ -2.52
Trim54Q9ERP3 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.7□□□□□ -2.52
Trim54Q9ERP3 Gm23173-201ENSMUST00000157161 160 ntBASIC-0.71□□□□□ -2.52
Trim54Q9ERP3 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
Trim54Q9ERP3 Gm23570-201ENSMUST00000083029 104 ntBASIC-0.71□□□□□ -2.52
Trim54Q9ERP3 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.71□□□□□ -2.52
Trim54Q9ERP3 Gm27987-201ENSMUST00000184023 93 ntBASIC-0.72□□□□□ -2.52
Trim54Q9ERP3 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.72□□□□□ -2.52
Trim54Q9ERP3 CT030170.1-201ENSMUST00000222183 148 ntBASIC-0.72□□□□□ -2.52
Trim54Q9ERP3 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-0.73□□□□□ -2.53
Trim54Q9ERP3 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.73□□□□□ -2.53
Trim54Q9ERP3 Mir3064-201ENSMUST00000175532 67 ntBASIC-0.74□□□□□ -2.53
Trim54Q9ERP3 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.74□□□□□ -2.53
Trim54Q9ERP3 Gm44932-201ENSMUST00000206799 121 ntBASIC-0.74□□□□□ -2.53
Trim54Q9ERP3 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC-0.75□□□□□ -2.53
Trim54Q9ERP3 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.75□□□□□ -2.53
Trim54Q9ERP3 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.75□□□□□ -2.53
Trim54Q9ERP3 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.76□□□□□ -2.53
Trim54Q9ERP3 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.77□□□□□ -2.53
Trim54Q9ERP3 Gm43206-201ENSMUST00000197990 114 ntBASIC-0.77□□□□□ -2.53
Trim54Q9ERP3 Gm25022-201ENSMUST00000102205 83 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir1950-201ENSMUST00000158526 74 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir467a-6-201ENSMUST00000177790 83 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir467a-3-201ENSMUST00000178082 83 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir467a-7-201ENSMUST00000178635 83 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir467a-10-201ENSMUST00000179320 83 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir467a-5-201ENSMUST00000179352 83 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir467a-2-201ENSMUST00000179447 83 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir467a-9-201ENSMUST00000179752 83 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir467a-4-201ENSMUST00000179923 83 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir467a-8-201ENSMUST00000180070 83 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir15b-201ENSMUST00000083646 64 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Mir494-201ENSMUST00000093632 85 ntBASIC-0.78□□□□□ -2.53
Trim54Q9ERP3 Gm23335-201ENSMUST00000117021 90 ntBASIC-0.79□□□□□ -2.54
Trim54Q9ERP3 Gm22446-201ENSMUST00000180108 104 ntBASIC-0.79□□□□□ -2.54
Trim54Q9ERP3 Gm25681-201ENSMUST00000083938 106 ntBASIC-0.79□□□□□ -2.54
Trim54Q9ERP3 Gm24701-201ENSMUST00000101946 105 ntBASIC-0.8□□□□□ -2.54
Trim54Q9ERP3 Gm22679-201ENSMUST00000116975 100 ntBASIC-0.8□□□□□ -2.54
Trim54Q9ERP3 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.8□□□□□ -2.54
Trim54Q9ERP3 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.81□□□□□ -2.54
Trim54Q9ERP3 Snord8-201ENSMUST00000175303 110 ntBASIC-0.81□□□□□ -2.54
Trim54Q9ERP3 Mir702-201ENSMUST00000102285 109 ntBASIC-0.82□□□□□ -2.54
Trim54Q9ERP3 Gm24495-201ENSMUST00000178575 79 ntBASIC-0.82□□□□□ -2.54
Trim54Q9ERP3 Gm22253-201ENSMUST00000179870 79 ntBASIC-0.82□□□□□ -2.54
Trim54Q9ERP3 Gm23856-201ENSMUST00000158380 99 ntBASIC-0.83□□□□□ -2.54
Trim54Q9ERP3 Mir677-202ENSMUST00000197076 78 ntBASIC-0.83□□□□□ -2.54
Trim54Q9ERP3 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.83□□□□□ -2.54
Trim54Q9ERP3 Gm23376-201ENSMUST00000082938 160 ntBASIC-0.83□□□□□ -2.54
Trim54Q9ERP3 Gm24203-201ENSMUST00000082949 114 ntBASIC-0.83□□□□□ -2.54
Trim54Q9ERP3 Gm25431-201ENSMUST00000101978 107 ntBASIC-0.84□□□□□ -2.54
Trim54Q9ERP3 Mir297-1-201ENSMUST00000103800 76 ntBASIC-0.84□□□□□ -2.54
Trim54Q9ERP3 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-0.84□□□□□ -2.54
Trim54Q9ERP3 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-0.84□□□□□ -2.54
Trim54Q9ERP3 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.84□□□□□ -2.54
Trim54Q9ERP3 Gm20305-201ENSMUST00000193226 177 ntBASIC-0.86□□□□□ -2.55
Trim54Q9ERP3 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.86□□□□□ -2.55
Trim54Q9ERP3 AC154832.1-201ENSMUST00000228928 141 ntBASIC-0.87□□□□□ -2.55
Trim54Q9ERP3 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.87□□□□□ -2.55
Trim54Q9ERP3 Gm23904-201ENSMUST00000157567 124 ntBASIC-0.88□□□□□ -2.55
Trim54Q9ERP3 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-0.88□□□□□ -2.55
Trim54Q9ERP3 Gm19248-201ENSMUST00000209404 110 ntBASIC-0.89□□□□□ -2.55
Trim54Q9ERP3 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.9□□□□□ -2.55
Trim54Q9ERP3 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.9□□□□□ -2.55
Trim54Q9ERP3 Mir1187-201ENSMUST00000116936 122 ntBASIC-0.9□□□□□ -2.55
Trim54Q9ERP3 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.91□□□□□ -2.56
Trim54Q9ERP3 Gm23817-201ENSMUST00000158449 104 ntBASIC-0.91□□□□□ -2.56
Trim54Q9ERP3 Gm25712-201ENSMUST00000158634 93 ntBASIC-0.91□□□□□ -2.56
Trim54Q9ERP3 Gm22813-202ENSMUST00000200346 124 ntBASIC-0.91□□□□□ -2.56
Trim54Q9ERP3 Gm23477-201ENSMUST00000158882 128 ntBASIC-0.92□□□□□ -2.56
Trim54Q9ERP3 Snord16a-201ENSMUST00000083895 99 ntBASIC-0.92□□□□□ -2.56
Trim54Q9ERP3 Gm24378-201ENSMUST00000122699 106 ntBASIC-0.93□□□□□ -2.56
Trim54Q9ERP3 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.93□□□□□ -2.56
Trim54Q9ERP3 Mir1839-201ENSMUST00000175366 127 ntBASIC-0.93□□□□□ -2.56
Trim54Q9ERP3 Mir6957-201ENSMUST00000183708 64 ntBASIC-0.93□□□□□ -2.56
Trim54Q9ERP3 Gm44311-201ENSMUST00000196448 69 ntBASIC-0.93□□□□□ -2.56
Trim54Q9ERP3 Mir136-201ENSMUST00000199494 62 ntBASIC-0.93□□□□□ -2.56
Trim54Q9ERP3 Gm24108-201ENSMUST00000175495 77 ntBASIC-0.94□□□□□ -2.56
Trim54Q9ERP3 Gm24459-201ENSMUST00000082730 86 ntBASIC-0.94□□□□□ -2.56
Trim54Q9ERP3 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.95□□□□□ -2.56
Trim54Q9ERP3 Gm25382-201ENSMUST00000157811 97 ntBASIC-0.95□□□□□ -2.56
Trim54Q9ERP3 Gm27944-201ENSMUST00000185155 103 ntBASIC-0.95□□□□□ -2.56
Trim54Q9ERP3 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.96□□□□□ -2.56
Trim54Q9ERP3 Gm24331-201ENSMUST00000175099 67 ntBASIC-0.96□□□□□ -2.56
Trim54Q9ERP3 Gm23801-201ENSMUST00000175561 67 ntBASIC-0.96□□□□□ -2.56
Trim54Q9ERP3 Gm24485-201ENSMUST00000178283 67 ntBASIC-0.96□□□□□ -2.56
Trim54Q9ERP3 Gm26131-201ENSMUST00000082725 110 ntBASIC-0.96□□□□□ -2.56
Trim54Q9ERP3 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-0.96□□□□□ -2.56
Trim54Q9ERP3 Gm25847-201ENSMUST00000116793 96 ntBASIC-0.97□□□□□ -2.56
Trim54Q9ERP3 Mir302c-201ENSMUST00000083548 68 ntBASIC-0.97□□□□□ -2.56
Trim54Q9ERP3 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.98□□□□□ -2.57
Trim54Q9ERP3 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.98□□□□□ -2.57
Trim54Q9ERP3 Mir7057-201ENSMUST00000184685 58 ntBASIC-0.98□□□□□ -2.57
Trim54Q9ERP3 Gm24714-201ENSMUST00000102382 101 ntBASIC-0.99□□□□□ -2.57
Trim54Q9ERP3 Gm26233-201ENSMUST00000175530 70 ntBASIC-0.99□□□□□ -2.57
Trim54Q9ERP3 Gm44589-201ENSMUST00000207025 115 ntBASIC-0.99□□□□□ -2.57
Trim54Q9ERP3 Gm25087-201ENSMUST00000101992 78 ntBASIC-1□□□□□ -2.57
Trim54Q9ERP3 Gm24612-201ENSMUST00000083267 107 ntBASIC-1□□□□□ -2.57
Trim54Q9ERP3 Snord57-201ENSMUST00000083338 72 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 76,532 protein–RNA pairs in 245.9 ms