Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm25798-201ENSMUST00000082641 107 ntBASIC-1.1□□□□□ -2.59
Ddx58Q6Q899 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.11□□□□□ -2.59
Ddx58Q6Q899 Gm26262-201ENSMUST00000158024 127 ntBASIC-1.11□□□□□ -2.59
Ddx58Q6Q899 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.11□□□□□ -2.59
Ddx58Q6Q899 Gm25987-201ENSMUST00000083234 107 ntBASIC-1.11□□□□□ -2.59
Ddx58Q6Q899 Gm23468-201ENSMUST00000157125 108 ntBASIC-1.12□□□□□ -2.59
Ddx58Q6Q899 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.13□□□□□ -2.59
Ddx58Q6Q899 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.13□□□□□ -2.59
Ddx58Q6Q899 Gm26499-201ENSMUST00000178544 79 ntBASIC-1.14□□□□□ -2.59
Ddx58Q6Q899 Gm26096-201ENSMUST00000179084 79 ntBASIC-1.14□□□□□ -2.59
Ddx58Q6Q899 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.14□□□□□ -2.59
Ddx58Q6Q899 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.15□□□□□ -2.59
Ddx58Q6Q899 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.15□□□□□ -2.59
Ddx58Q6Q899 Gm24482-201ENSMUST00000117005 93 ntBASIC-1.15□□□□□ -2.59
Ddx58Q6Q899 Mir29b-1-201ENSMUST00000083670 71 ntBASIC-1.15□□□□□ -2.59
Ddx58Q6Q899 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.16□□□□□ -2.6
Ddx58Q6Q899 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.16□□□□□ -2.6
Ddx58Q6Q899 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.16□□□□□ -2.6
Ddx58Q6Q899 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.17□□□□□ -2.6
Ddx58Q6Q899 Gm24003-201ENSMUST00000158455 100 ntBASIC-1.17□□□□□ -2.6
Ddx58Q6Q899 Snord123-201ENSMUST00000158692 71 ntBASIC-1.17□□□□□ -2.6
Ddx58Q6Q899 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.17□□□□□ -2.6
Ddx58Q6Q899 Mir6339-201ENSMUST00000185120 117 ntBASIC-1.17□□□□□ -2.6
Ddx58Q6Q899 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.17□□□□□ -2.6
Ddx58Q6Q899 Gm26043-201ENSMUST00000116912 91 ntBASIC-1.18□□□□□ -2.6
Ddx58Q6Q899 Gm23974-201ENSMUST00000083321 131 ntBASIC-1.18□□□□□ -2.6
Ddx58Q6Q899 Gm24586-201ENSMUST00000116695 89 ntBASIC-1.19□□□□□ -2.6
Ddx58Q6Q899 Gm24650-201ENSMUST00000157105 103 ntBASIC-1.19□□□□□ -2.6
Ddx58Q6Q899 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.19□□□□□ -2.6
Ddx58Q6Q899 Gm22458-201ENSMUST00000082576 107 ntBASIC-1.19□□□□□ -2.6
Ddx58Q6Q899 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.2□□□□□ -2.6
Ddx58Q6Q899 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.2□□□□□ -2.6
Ddx58Q6Q899 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.2□□□□□ -2.6
Ddx58Q6Q899 Mir6964-201ENSMUST00000200252 59 ntBASIC-1.2□□□□□ -2.6
Ddx58Q6Q899 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.2□□□□□ -2.6
Ddx58Q6Q899 Gm25644-201ENSMUST00000083209 107 ntBASIC-1.2□□□□□ -2.6
Ddx58Q6Q899 Mir543-201ENSMUST00000102286 76 ntBASIC-1.21□□□□□ -2.6
Ddx58Q6Q899 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
Ddx58Q6Q899 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
Ddx58Q6Q899 Gm24091-201ENSMUST00000082550 83 ntBASIC-1.21□□□□□ -2.6
Ddx58Q6Q899 Gm23711-201ENSMUST00000083856 83 ntBASIC-1.21□□□□□ -2.6
Ddx58Q6Q899 Gm22354-201ENSMUST00000083919 70 ntBASIC-1.22□□□□□ -2.6
Ddx58Q6Q899 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.23□□□□□ -2.61
Ddx58Q6Q899 Gm25542-201ENSMUST00000116889 94 ntBASIC-1.24□□□□□ -2.61
Ddx58Q6Q899 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.24□□□□□ -2.61
Ddx58Q6Q899 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.25□□□□□ -2.61
Ddx58Q6Q899 Snord57-201ENSMUST00000083338 72 ntBASIC-1.25□□□□□ -2.61
Ddx58Q6Q899 Gm11333-201ENSMUST00000119479 148 ntBASIC-1.26□□□□□ -2.61
Ddx58Q6Q899 Gm23590-201ENSMUST00000157661 104 ntBASIC-1.26□□□□□ -2.61
Ddx58Q6Q899 Gm22729-201ENSMUST00000158088 129 ntBASIC-1.26□□□□□ -2.61
Ddx58Q6Q899 Gm25740-201ENSMUST00000180247 107 ntBASIC-1.26□□□□□ -2.61
Ddx58Q6Q899 Gm25854-201ENSMUST00000082792 72 ntBASIC-1.26□□□□□ -2.61
Ddx58Q6Q899 Mir15b-201ENSMUST00000083646 64 ntBASIC-1.26□□□□□ -2.61
Ddx58Q6Q899 Gm27944-201ENSMUST00000185155 103 ntBASIC-1.27□□□□□ -2.61
Ddx58Q6Q899 Gm24410-201ENSMUST00000083433 107 ntBASIC-1.27□□□□□ -2.61
Ddx58Q6Q899 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.27□□□□□ -2.61
Ddx58Q6Q899 CT030170.1-201ENSMUST00000222183 148 ntBASIC-1.28□□□□□ -2.61
Ddx58Q6Q899 Snord8-201ENSMUST00000175303 110 ntBASIC-1.29□□□□□ -2.62
Ddx58Q6Q899 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.3□□□□□ -2.62
Ddx58Q6Q899 Mir876-201ENSMUST00000104659 81 ntBASIC-1.3□□□□□ -2.62
Ddx58Q6Q899 Gm23812-201ENSMUST00000175156 84 ntBASIC-1.3□□□□□ -2.62
Ddx58Q6Q899 Gm23374-201ENSMUST00000175408 84 ntBASIC-1.3□□□□□ -2.62
Ddx58Q6Q899 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.3□□□□□ -2.62
Ddx58Q6Q899 Mir450b-201ENSMUST00000102095 82 ntBASIC-1.31□□□□□ -2.62
Ddx58Q6Q899 Mirlet7a-2-201ENSMUST00000175029 96 ntBASIC-1.31□□□□□ -2.62
Ddx58Q6Q899 Gm26491-201ENSMUST00000179268 121 ntBASIC-1.31□□□□□ -2.62
Ddx58Q6Q899 Mir494-201ENSMUST00000093632 85 ntBASIC-1.31□□□□□ -2.62
Ddx58Q6Q899 Gm25087-201ENSMUST00000101992 78 ntBASIC-1.32□□□□□ -2.62
Ddx58Q6Q899 Gm25061-201ENSMUST00000104665 107 ntBASIC-1.32□□□□□ -2.62
Ddx58Q6Q899 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.32□□□□□ -2.62
Ddx58Q6Q899 Gm26467-201ENSMUST00000097257 78 ntBASIC-1.32□□□□□ -2.62
Ddx58Q6Q899 Gm25112-201ENSMUST00000122680 104 ntBASIC-1.33□□□□□ -2.62
Ddx58Q6Q899 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.33□□□□□ -2.62
Ddx58Q6Q899 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.34□□□□□ -2.62
Ddx58Q6Q899 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-1.34□□□□□ -2.62
Ddx58Q6Q899 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.35□□□□□ -2.63
Ddx58Q6Q899 Gm22845-201ENSMUST00000157712 104 ntBASIC-1.36□□□□□ -2.63
Ddx58Q6Q899 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.36□□□□□ -2.63
Ddx58Q6Q899 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.37□□□□□ -2.63
Ddx58Q6Q899 Gm23570-201ENSMUST00000083029 104 ntBASIC-1.37□□□□□ -2.63
Ddx58Q6Q899 Gm24554-201ENSMUST00000158654 73 ntBASIC-1.38□□□□□ -2.63
Ddx58Q6Q899 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC-1.39□□□□□ -2.63
Ddx58Q6Q899 Mir297-1-201ENSMUST00000103800 76 ntBASIC-1.39□□□□□ -2.63
Ddx58Q6Q899 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.39□□□□□ -2.63
Ddx58Q6Q899 Mir3064-201ENSMUST00000175532 67 ntBASIC-1.4□□□□□ -2.63
Ddx58Q6Q899 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.4□□□□□ -2.63
Ddx58Q6Q899 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.4□□□□□ -2.63
Ddx58Q6Q899 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.4□□□□□ -2.63
Ddx58Q6Q899 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.4□□□□□ -2.63
Ddx58Q6Q899 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.41□□□□□ -2.64
Ddx58Q6Q899 Gm22016-201ENSMUST00000158793 114 ntBASIC-1.41□□□□□ -2.64
Ddx58Q6Q899 Gm23573-201ENSMUST00000104408 107 ntBASIC-1.42□□□□□ -2.64
Ddx58Q6Q899 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.42□□□□□ -2.64
Ddx58Q6Q899 Gm24197-201ENSMUST00000175085 109 ntBASIC-1.43□□□□□ -2.64
Ddx58Q6Q899 Gm22717-201ENSMUST00000122703 171 ntBASIC-1.44□□□□□ -2.64
Ddx58Q6Q899 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.44□□□□□ -2.64
Ddx58Q6Q899 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC-1.44□□□□□ -2.64
Ddx58Q6Q899 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.44□□□□□ -2.64
Ddx58Q6Q899 Gm26375-201ENSMUST00000101829 106 ntBASIC-1.45□□□□□ -2.64
Ddx58Q6Q899 Gm25326-201ENSMUST00000101903 107 ntBASIC-1.45□□□□□ -2.64
Retrieved 100 of 76,532 protein–RNA pairs in 143.9 ms