Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm24701-201ENSMUST00000101946 105 ntBASIC0□□□□□ -2.41
Ddb1Q3U1J4 Gm23173-201ENSMUST00000157161 160 ntBASIC0□□□□□ -2.41
Ddb1Q3U1J4 Gm27749-201ENSMUST00000183651 125 ntBASIC0□□□□□ -2.41
Ddb1Q3U1J4 Mir7651-201ENSMUST00000184154 64 ntBASIC0□□□□□ -2.41
Ddb1Q3U1J4 Gm24396-201ENSMUST00000116905 93 ntBASIC-0.01□□□□□ -2.41
Ddb1Q3U1J4 Gm22078-201ENSMUST00000157593 103 ntBASIC-0.01□□□□□ -2.41
Ddb1Q3U1J4 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.01□□□□□ -2.41
Ddb1Q3U1J4 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.01□□□□□ -2.41
Ddb1Q3U1J4 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.01□□□□□ -2.41
Ddb1Q3U1J4 Gm25326-201ENSMUST00000101903 107 ntBASIC-0.02□□□□□ -2.41
Ddb1Q3U1J4 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.02□□□□□ -2.41
Ddb1Q3U1J4 Gm22016-201ENSMUST00000158793 114 ntBASIC-0.02□□□□□ -2.41
Ddb1Q3U1J4 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.02□□□□□ -2.41
Ddb1Q3U1J4 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.03□□□□□ -2.41
Ddb1Q3U1J4 Gm23573-201ENSMUST00000104408 107 ntBASIC-0.03□□□□□ -2.41
Ddb1Q3U1J4 Gm24723-201ENSMUST00000158233 132 ntBASIC-0.03□□□□□ -2.41
Ddb1Q3U1J4 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.03□□□□□ -2.41
Ddb1Q3U1J4 Gm27798-201ENSMUST00000184989 71 ntBASIC-0.03□□□□□ -2.41
Ddb1Q3U1J4 Mir382-201ENSMUST00000083494 76 ntBASIC-0.03□□□□□ -2.41
Ddb1Q3U1J4 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.04□□□□□ -2.42
Ddb1Q3U1J4 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.05□□□□□ -2.42
Ddb1Q3U1J4 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.05□□□□□ -2.42
Ddb1Q3U1J4 Snord57-201ENSMUST00000083338 72 ntBASIC-0.05□□□□□ -2.42
Ddb1Q3U1J4 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.05□□□□□ -2.42
Ddb1Q3U1J4 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.05□□□□□ -2.42
Ddb1Q3U1J4 Gm22965-201ENSMUST00000157958 101 ntBASIC-0.06□□□□□ -2.42
Ddb1Q3U1J4 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.06□□□□□ -2.42
Ddb1Q3U1J4 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.06□□□□□ -2.42
Ddb1Q3U1J4 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.07□□□□□ -2.42
Ddb1Q3U1J4 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.08□□□□□ -2.42
Ddb1Q3U1J4 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.08□□□□□ -2.42
Ddb1Q3U1J4 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.08□□□□□ -2.42
Ddb1Q3U1J4 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.08□□□□□ -2.42
Ddb1Q3U1J4 Gm24259-201ENSMUST00000083740 107 ntBASIC-0.08□□□□□ -2.42
Ddb1Q3U1J4 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-0.1□□□□□ -2.43
Ddb1Q3U1J4 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.1□□□□□ -2.43
Ddb1Q3U1J4 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.1□□□□□ -2.43
Ddb1Q3U1J4 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.1□□□□□ -2.43
Ddb1Q3U1J4 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.11□□□□□ -2.43
Ddb1Q3U1J4 Gm26375-201ENSMUST00000101829 106 ntBASIC-0.12□□□□□ -2.43
Ddb1Q3U1J4 Gm26052-201ENSMUST00000104646 84 ntBASIC-0.12□□□□□ -2.43
Ddb1Q3U1J4 Mir672-201ENSMUST00000102331 100 ntBASIC-0.13□□□□□ -2.43
Ddb1Q3U1J4 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.13□□□□□ -2.43
Ddb1Q3U1J4 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-0.13□□□□□ -2.43
Ddb1Q3U1J4 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.14□□□□□ -2.43
Ddb1Q3U1J4 Gm24996-201ENSMUST00000158390 99 ntBASIC-0.14□□□□□ -2.43
Ddb1Q3U1J4 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.14□□□□□ -2.43
Ddb1Q3U1J4 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.15□□□□□ -2.43
Ddb1Q3U1J4 Gm22746-201ENSMUST00000082494 107 ntBASIC-0.15□□□□□ -2.43
Ddb1Q3U1J4 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.16□□□□□ -2.44
Ddb1Q3U1J4 Gm24797-201ENSMUST00000178103 107 ntBASIC-0.16□□□□□ -2.44
Ddb1Q3U1J4 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.16□□□□□ -2.44
Ddb1Q3U1J4 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.17□□□□□ -2.44
Ddb1Q3U1J4 Gm22357-201ENSMUST00000082882 83 ntBASIC-0.17□□□□□ -2.44
Ddb1Q3U1J4 Mir702-201ENSMUST00000102285 109 ntBASIC-0.18□□□□□ -2.44
Ddb1Q3U1J4 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.18□□□□□ -2.44
Ddb1Q3U1J4 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.18□□□□□ -2.44
Ddb1Q3U1J4 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.18□□□□□ -2.44
Ddb1Q3U1J4 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.18□□□□□ -2.44
Ddb1Q3U1J4 Mir214-201ENSMUST00000083582 110 ntBASIC-0.18□□□□□ -2.44
Ddb1Q3U1J4 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.19□□□□□ -2.44
Ddb1Q3U1J4 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.2□□□□□ -2.44
Ddb1Q3U1J4 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.2□□□□□ -2.44
Ddb1Q3U1J4 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.2□□□□□ -2.44
Ddb1Q3U1J4 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-0.21□□□□□ -2.44
Ddb1Q3U1J4 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.21□□□□□ -2.44
Ddb1Q3U1J4 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.22□□□□□ -2.44
Ddb1Q3U1J4 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.22□□□□□ -2.44
Ddb1Q3U1J4 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.23□□□□□ -2.45
Ddb1Q3U1J4 Gm25465-201ENSMUST00000157716 105 ntBASIC-0.23□□□□□ -2.45
Ddb1Q3U1J4 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.23□□□□□ -2.45
Ddb1Q3U1J4 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.24□□□□□ -2.45
Ddb1Q3U1J4 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.24□□□□□ -2.45
Ddb1Q3U1J4 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
Ddb1Q3U1J4 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.26□□□□□ -2.45
Ddb1Q3U1J4 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.26□□□□□ -2.45
Ddb1Q3U1J4 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.27□□□□□ -2.45
Ddb1Q3U1J4 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.27□□□□□ -2.45
Ddb1Q3U1J4 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.28□□□□□ -2.45
Ddb1Q3U1J4 Gm23787-201ENSMUST00000122538 73 ntBASIC-0.28□□□□□ -2.45
Ddb1Q3U1J4 Gm22401-201ENSMUST00000174927 117 ntBASIC-0.28□□□□□ -2.45
Ddb1Q3U1J4 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.28□□□□□ -2.45
Ddb1Q3U1J4 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.29□□□□□ -2.46
Ddb1Q3U1J4 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.3□□□□□ -2.46
Ddb1Q3U1J4 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.3□□□□□ -2.46
Ddb1Q3U1J4 Gm22474-201ENSMUST00000179407 107 ntBASIC-0.31□□□□□ -2.46
Ddb1Q3U1J4 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.31□□□□□ -2.46
Ddb1Q3U1J4 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.31□□□□□ -2.46
Ddb1Q3U1J4 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.31□□□□□ -2.46
Ddb1Q3U1J4 Gm25779-201ENSMUST00000116710 95 ntBASIC-0.33□□□□□ -2.46
Ddb1Q3U1J4 Mir96-201ENSMUST00000083652 106 ntBASIC-0.34□□□□□ -2.46
Ddb1Q3U1J4 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.34□□□□□ -2.46
Ddb1Q3U1J4 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.35□□□□□ -2.47
Ddb1Q3U1J4 Gm25222-201ENSMUST00000158199 126 ntBASIC-0.35□□□□□ -2.47
Ddb1Q3U1J4 Gm25705-201ENSMUST00000083119 104 ntBASIC-0.35□□□□□ -2.47
Ddb1Q3U1J4 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.37□□□□□ -2.47
Ddb1Q3U1J4 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.38□□□□□ -2.47
Ddb1Q3U1J4 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.39□□□□□ -2.47
Ddb1Q3U1J4 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.39□□□□□ -2.47
Ddb1Q3U1J4 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 142 ms