Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm22157-201ENSMUST00000158410 104 ntBASIC0.09□□□□□ -2.4
Shmt1P50431 Gm44375-201ENSMUST00000196657 150 ntBASIC0.09□□□□□ -2.4
Shmt1P50431 Gm22368-201ENSMUST00000102416 109 ntBASIC0.08□□□□□ -2.4
Shmt1P50431 Gm25497-201ENSMUST00000104425 132 ntBASIC0.08□□□□□ -2.4
Shmt1P50431 Gm22327-201ENSMUST00000158899 108 ntBASIC0.08□□□□□ -2.4
Shmt1P50431 Gm23573-201ENSMUST00000104408 107 ntBASIC0.07□□□□□ -2.4
Shmt1P50431 Mir382-201ENSMUST00000083494 76 ntBASIC0.04□□□□□ -2.4
Shmt1P50431 Gm24903-201ENSMUST00000158131 126 ntBASIC0.03□□□□□ -2.4
Shmt1P50431 Gm26210-201ENSMUST00000158680 91 ntBASIC0.03□□□□□ -2.4
Shmt1P50431 Gm24218-201ENSMUST00000180163 105 ntBASIC0.03□□□□□ -2.4
Shmt1P50431 Gm22077-201ENSMUST00000157594 93 ntBASIC0.02□□□□□ -2.41
Shmt1P50431 Gm27798-201ENSMUST00000184989 71 ntBASIC0.02□□□□□ -2.41
Shmt1P50431 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Shmt1P50431 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Shmt1P50431 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
Shmt1P50431 Gm22335-201ENSMUST00000157724 99 ntBASIC0.01□□□□□ -2.41
Shmt1P50431 Mir3089-201ENSMUST00000175350 84 ntBASIC0.01□□□□□ -2.41
Shmt1P50431 Gm25705-201ENSMUST00000083119 104 ntBASIC0.01□□□□□ -2.41
Shmt1P50431 Gm25510-201ENSMUST00000116986 123 ntBASIC0□□□□□ -2.41
Shmt1P50431 Gm22401-201ENSMUST00000174927 117 ntBASIC0□□□□□ -2.41
Shmt1P50431 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-0.02□□□□□ -2.41
Shmt1P50431 Gm23240-201ENSMUST00000083009 121 ntBASIC-0.02□□□□□ -2.41
Shmt1P50431 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.03□□□□□ -2.41
Shmt1P50431 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.03□□□□□ -2.41
Shmt1P50431 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.04□□□□□ -2.42
Shmt1P50431 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.04□□□□□ -2.42
Shmt1P50431 Mir1948-201ENSMUST00000157325 85 ntBASIC-0.04□□□□□ -2.42
Shmt1P50431 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.04□□□□□ -2.42
Shmt1P50431 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.04□□□□□ -2.42
Shmt1P50431 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.04□□□□□ -2.42
Shmt1P50431 Gm25524-201ENSMUST00000101821 107 ntBASIC-0.05□□□□□ -2.42
Shmt1P50431 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.05□□□□□ -2.42
Shmt1P50431 Gm23607-201ENSMUST00000104550 126 ntBASIC-0.05□□□□□ -2.42
Shmt1P50431 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.05□□□□□ -2.42
Shmt1P50431 Gm22357-201ENSMUST00000082882 83 ntBASIC-0.05□□□□□ -2.42
Shmt1P50431 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.06□□□□□ -2.42
Shmt1P50431 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.06□□□□□ -2.42
Shmt1P50431 Mir702-201ENSMUST00000102285 109 ntBASIC-0.08□□□□□ -2.42
Shmt1P50431 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.08□□□□□ -2.42
Shmt1P50431 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.08□□□□□ -2.42
Shmt1P50431 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.08□□□□□ -2.42
Shmt1P50431 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.09□□□□□ -2.42
Shmt1P50431 Gm25158-201ENSMUST00000177681 121 ntBASIC-0.09□□□□□ -2.42
Shmt1P50431 Gm26229-201ENSMUST00000179699 121 ntBASIC-0.09□□□□□ -2.42
Shmt1P50431 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.1□□□□□ -2.43
Shmt1P50431 Mir672-201ENSMUST00000102331 100 ntBASIC-0.11□□□□□ -2.43
Shmt1P50431 Gm24297-201ENSMUST00000158300 68 ntBASIC-0.11□□□□□ -2.43
Shmt1P50431 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.11□□□□□ -2.43
Shmt1P50431 Gm22474-201ENSMUST00000179407 107 ntBASIC-0.11□□□□□ -2.43
Shmt1P50431 Mir669a-3-201ENSMUST00000102074 109 ntBASIC-0.12□□□□□ -2.43
Shmt1P50431 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.12□□□□□ -2.43
Shmt1P50431 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.13□□□□□ -2.43
Shmt1P50431 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.13□□□□□ -2.43
Shmt1P50431 AC161271.1-201ENSMUST00000226914 150 ntBASIC-0.13□□□□□ -2.43
Shmt1P50431 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.13□□□□□ -2.43
Shmt1P50431 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.14□□□□□ -2.43
Shmt1P50431 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.14□□□□□ -2.43
Shmt1P50431 Mir141-201ENSMUST00000083540 72 ntBASIC-0.14□□□□□ -2.43
Shmt1P50431 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
Shmt1P50431 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.15□□□□□ -2.43
Shmt1P50431 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.15□□□□□ -2.43
Shmt1P50431 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.16□□□□□ -2.44
Shmt1P50431 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.17□□□□□ -2.44
Shmt1P50431 Gm26052-201ENSMUST00000104646 84 ntBASIC-0.17□□□□□ -2.44
Shmt1P50431 Mir191-201ENSMUST00000196210 74 ntBASIC-0.17□□□□□ -2.44
Shmt1P50431 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.2□□□□□ -2.44
Shmt1P50431 Gm24710-201ENSMUST00000175235 101 ntBASIC-0.2□□□□□ -2.44
Shmt1P50431 Gm24135-201ENSMUST00000179085 101 ntBASIC-0.2□□□□□ -2.44
Shmt1P50431 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.21□□□□□ -2.44
Shmt1P50431 Gm23630-201ENSMUST00000175292 104 ntBASIC-0.21□□□□□ -2.44
Shmt1P50431 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.22□□□□□ -2.44
Shmt1P50431 Gm42773-201ENSMUST00000196962 148 ntBASIC-0.22□□□□□ -2.44
Shmt1P50431 Gm25779-201ENSMUST00000116710 95 ntBASIC-0.23□□□□□ -2.45
Shmt1P50431 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.23□□□□□ -2.45
Shmt1P50431 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.24□□□□□ -2.45
Shmt1P50431 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.25□□□□□ -2.45
Shmt1P50431 Gm25222-201ENSMUST00000158199 126 ntBASIC-0.26□□□□□ -2.45
Shmt1P50431 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.26□□□□□ -2.45
Shmt1P50431 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.27□□□□□ -2.45
Shmt1P50431 Mir214-201ENSMUST00000083582 110 ntBASIC-0.27□□□□□ -2.45
Shmt1P50431 Gm23787-201ENSMUST00000122538 73 ntBASIC-0.28□□□□□ -2.45
Shmt1P50431 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.28□□□□□ -2.45
Shmt1P50431 Gm25862-201ENSMUST00000158250 129 ntBASIC-0.28□□□□□ -2.45
Shmt1P50431 Gm22305-201ENSMUST00000082690 108 ntBASIC-0.28□□□□□ -2.45
Shmt1P50431 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.29□□□□□ -2.46
Shmt1P50431 Gm23961-201ENSMUST00000104685 97 ntBASIC-0.3□□□□□ -2.46
Shmt1P50431 Mir136-201ENSMUST00000199494 62 ntBASIC-0.3□□□□□ -2.46
Shmt1P50431 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.31□□□□□ -2.46
Shmt1P50431 Gm23909-201ENSMUST00000104598 131 ntBASIC-0.31□□□□□ -2.46
Shmt1P50431 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.32□□□□□ -2.46
Shmt1P50431 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.33□□□□□ -2.46
Shmt1P50431 Gm25903-201ENSMUST00000158492 103 ntBASIC-0.34□□□□□ -2.46
Shmt1P50431 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.34□□□□□ -2.46
Shmt1P50431 Gm37646-201ENSMUST00000191756 111 ntBASIC-0.35□□□□□ -2.47
Shmt1P50431 Gm22879-201ENSMUST00000082895 74 ntBASIC-0.35□□□□□ -2.47
Shmt1P50431 Mir96-201ENSMUST00000083652 106 ntBASIC-0.37□□□□□ -2.47
Shmt1P50431 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.38□□□□□ -2.47
Shmt1P50431 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.38□□□□□ -2.47
Shmt1P50431 Gm23992-201ENSMUST00000174981 67 ntBASIC-0.39□□□□□ -2.47
Shmt1P50431 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms