Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm27784-201ENSMUST00000184926 113 ntBASIC0.88□□□□□ -2.27
Col18a1P39061 Gm22981-201ENSMUST00000082611 75 ntBASIC0.88□□□□□ -2.27
Col18a1P39061 Mir1948-201ENSMUST00000157325 85 ntBASIC0.87□□□□□ -2.27
Col18a1P39061 Gm25388-201ENSMUST00000157339 151 ntBASIC0.87□□□□□ -2.27
Col18a1P39061 AC154832.1-201ENSMUST00000228928 141 ntBASIC0.87□□□□□ -2.27
Col18a1P39061 Mir7229-201ENSMUST00000197062 53 ntBASIC0.86□□□□□ -2.27
Col18a1P39061 Gm23531-201ENSMUST00000104567 68 ntBASIC0.85□□□□□ -2.27
Col18a1P39061 Mir6896-201ENSMUST00000198033 73 ntBASIC0.85□□□□□ -2.27
Col18a1P39061 Mir224-201ENSMUST00000083608 82 ntBASIC0.85□□□□□ -2.27
Col18a1P39061 Mir363-201ENSMUST00000093598 75 ntBASIC0.85□□□□□ -2.27
Col18a1P39061 Gm25431-201ENSMUST00000101978 107 ntBASIC0.85□□□□□ -2.27
Col18a1P39061 Mir7091-201ENSMUST00000184075 79 ntBASIC0.85□□□□□ -2.27
Col18a1P39061 DQ267101-201ENSMUST00000082562 73 ntBASIC0.85□□□□□ -2.27
Col18a1P39061 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.85□□□□□ -2.27
Col18a1P39061 Snord35a-201ENSMUST00000083884 90 ntBASIC0.85□□□□□ -2.27
Col18a1P39061 Mir7077-201ENSMUST00000183991 57 ntBASIC0.84□□□□□ -2.27
Col18a1P39061 Gm25683-201ENSMUST00000083940 131 ntBASIC0.84□□□□□ -2.27
Col18a1P39061 Mir3105-201ENSMUST00000175480 85 ntBASIC0.83□□□□□ -2.28
Col18a1P39061 Mir33-201ENSMUST00000083531 69 ntBASIC0.83□□□□□ -2.28
Col18a1P39061 Gm26484-201ENSMUST00000158018 106 ntBASIC0.83□□□□□ -2.28
Col18a1P39061 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.82□□□□□ -2.28
Col18a1P39061 Gm23607-201ENSMUST00000104550 126 ntBASIC0.8□□□□□ -2.28
Col18a1P39061 Gm22335-201ENSMUST00000157724 99 ntBASIC0.8□□□□□ -2.28
Col18a1P39061 Gm25862-201ENSMUST00000158250 129 ntBASIC0.8□□□□□ -2.28
Col18a1P39061 Gm24884-201ENSMUST00000158784 119 ntBASIC0.8□□□□□ -2.28
Col18a1P39061 Gm44303-201ENSMUST00000196348 83 ntBASIC0.8□□□□□ -2.28
Col18a1P39061 Snord32a-201ENSMUST00000083285 83 ntBASIC0.8□□□□□ -2.28
Col18a1P39061 Gm25408-201ENSMUST00000104104 133 ntBASIC0.8□□□□□ -2.28
Col18a1P39061 Gm25023-201ENSMUST00000082977 107 ntBASIC0.8□□□□□ -2.28
Col18a1P39061 Gm24387-201ENSMUST00000104625 90 ntBASIC0.79□□□□□ -2.28
Col18a1P39061 Gm38208-201ENSMUST00000192476 114 ntBASIC0.79□□□□□ -2.28
Col18a1P39061 Mir702-201ENSMUST00000102285 109 ntBASIC0.78□□□□□ -2.29
Col18a1P39061 Gm26236-201ENSMUST00000175536 137 ntBASIC0.78□□□□□ -2.29
Col18a1P39061 Gm23969-201ENSMUST00000083324 74 ntBASIC0.77□□□□□ -2.29
Col18a1P39061 Gm24678-201ENSMUST00000158756 104 ntBASIC0.76□□□□□ -2.29
Col18a1P39061 Gm44301-201ENSMUST00000200362 143 ntBASIC0.76□□□□□ -2.29
Col18a1P39061 Gm44803-201ENSMUST00000204384 156 ntBASIC0.76□□□□□ -2.29
Col18a1P39061 Gm10663-201ENSMUST00000098716 66 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Col18a1P39061 Gm44457-201ENSMUST00000198109 76 ntBASIC0.75□□□□□ -2.29
Col18a1P39061 Mir3065-201ENSMUST00000198674 87 ntBASIC0.75□□□□□ -2.29
Col18a1P39061 Gm23811-201ENSMUST00000175155 84 ntBASIC0.74□□□□□ -2.29
Col18a1P39061 Gm27749-201ENSMUST00000183651 125 ntBASIC0.74□□□□□ -2.29
Col18a1P39061 Mir670-201ENSMUST00000102380 100 ntBASIC0.73□□□□□ -2.29
Col18a1P39061 Gm23315-201ENSMUST00000158003 109 ntBASIC0.73□□□□□ -2.29
Col18a1P39061 Gm22239-201ENSMUST00000175220 103 ntBASIC0.73□□□□□ -2.29
Col18a1P39061 Gm24777-201ENSMUST00000157644 107 ntBASIC0.73□□□□□ -2.29
Col18a1P39061 Gm25995-201ENSMUST00000175396 142 ntBASIC0.73□□□□□ -2.29
Col18a1P39061 Mir7065-201ENSMUST00000185110 61 ntBASIC0.73□□□□□ -2.29
Col18a1P39061 Mir18-201ENSMUST00000083469 96 ntBASIC0.73□□□□□ -2.29
Col18a1P39061 Mir695-201ENSMUST00000102261 109 ntBASIC0.72□□□□□ -2.29
Col18a1P39061 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.72□□□□□ -2.29
Col18a1P39061 Gm23749-201ENSMUST00000104223 131 ntBASIC0.7□□□□□ -2.3
Col18a1P39061 Gm25378-201ENSMUST00000104333 129 ntBASIC0.7□□□□□ -2.3
Col18a1P39061 Gm45688-201ENSMUST00000210002 101 ntBASIC0.7□□□□□ -2.3
Col18a1P39061 Gm22838-201ENSMUST00000158437 99 ntBASIC0.69□□□□□ -2.3
Col18a1P39061 Mir28c-201ENSMUST00000200096 75 ntBASIC0.69□□□□□ -2.3
Col18a1P39061 Gm23909-201ENSMUST00000104598 131 ntBASIC0.68□□□□□ -2.3
Col18a1P39061 Gm37750-201ENSMUST00000193563 129 ntBASIC0.68□□□□□ -2.3
Col18a1P39061 Gm27289-201ENSMUST00000183341 82 ntBASIC0.68□□□□□ -2.3
Col18a1P39061 Gm42773-201ENSMUST00000196962 148 ntBASIC0.68□□□□□ -2.3
Col18a1P39061 Snord91a-201ENSMUST00000104305 93 ntBASIC0.67□□□□□ -2.3
Col18a1P39061 Snord33-201ENSMUST00000083694 84 ntBASIC0.64□□□□□ -2.31
Col18a1P39061 Gm22197-201ENSMUST00000116866 58 ntBASIC0.63□□□□□ -2.31
Col18a1P39061 Gm22602-201ENSMUST00000157596 95 ntBASIC0.63□□□□□ -2.31
Col18a1P39061 Gm38113-201ENSMUST00000193704 201 ntBASIC0.62□□□□□ -2.31
Col18a1P39061 Gm44828-201ENSMUST00000203745 106 ntBASIC0.62□□□□□ -2.31
Col18a1P39061 Gm24502-201ENSMUST00000158453 105 ntBASIC0.62□□□□□ -2.31
Col18a1P39061 Gm24971-201ENSMUST00000175581 110 ntBASIC0.62□□□□□ -2.31
Col18a1P39061 Gm25108-201ENSMUST00000122473 78 ntBASIC0.61□□□□□ -2.31
Col18a1P39061 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.61□□□□□ -2.31
Col18a1P39061 Gm24020-201ENSMUST00000180156 108 ntBASIC0.6□□□□□ -2.31
Col18a1P39061 Gm44347-201ENSMUST00000199602 108 ntBASIC0.6□□□□□ -2.31
Col18a1P39061 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Col18a1P39061 Mir362-201ENSMUST00000093592 65 ntBASIC0.59□□□□□ -2.32
Col18a1P39061 Gm24843-201ENSMUST00000158682 76 ntBASIC0.58□□□□□ -2.32
Col18a1P39061 Gm23442-201ENSMUST00000082919 134 ntBASIC0.58□□□□□ -2.32
Col18a1P39061 Mir7681-201ENSMUST00000184834 72 ntBASIC0.57□□□□□ -2.32
Col18a1P39061 Mir18b-201ENSMUST00000103923 83 ntBASIC0.57□□□□□ -2.32
Col18a1P39061 Mir7651-201ENSMUST00000184154 64 ntBASIC0.57□□□□□ -2.32
Col18a1P39061 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
Col18a1P39061 Mir466m-201ENSMUST00000175052 84 ntBASIC0.56□□□□□ -2.32
Col18a1P39061 Mir6915-201ENSMUST00000198839 69 ntBASIC0.55□□□□□ -2.32
Col18a1P39061 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.55□□□□□ -2.32
Col18a1P39061 Gm24646-201ENSMUST00000157109 99 ntBASIC0.53□□□□□ -2.32
Col18a1P39061 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.53□□□□□ -2.32
Col18a1P39061 Gm45541-201ENSMUST00000210443 54 ntBASIC0.53□□□□□ -2.32
Col18a1P39061 Gm26303-201ENSMUST00000116845 119 ntBASIC0.52□□□□□ -2.33
Col18a1P39061 Gm25510-201ENSMUST00000116986 123 ntBASIC0.52□□□□□ -2.33
Col18a1P39061 Mir3089-201ENSMUST00000175350 84 ntBASIC0.52□□□□□ -2.33
Col18a1P39061 Mir327-201ENSMUST00000199328 69 ntBASIC0.52□□□□□ -2.33
Col18a1P39061 Gm23159-201ENSMUST00000175088 77 ntBASIC0.51□□□□□ -2.33
Col18a1P39061 Gm24963-201ENSMUST00000157916 144 ntBASIC0.5□□□□□ -2.33
Col18a1P39061 Gm22305-201ENSMUST00000082690 108 ntBASIC0.5□□□□□ -2.33
Col18a1P39061 Gm22757-201ENSMUST00000102279 96 ntBASIC0.49□□□□□ -2.33
Col18a1P39061 Gm43432-201ENSMUST00000196352 121 ntBASIC0.49□□□□□ -2.33
Col18a1P39061 Mir710-201ENSMUST00000102088 110 ntBASIC0.48□□□□□ -2.33
Col18a1P39061 Gm26472-201ENSMUST00000116760 83 ntBASIC0.48□□□□□ -2.33
Col18a1P39061 Mir216a-201ENSMUST00000083605 72 ntBASIC0.48□□□□□ -2.33
Col18a1P39061 Gm22759-201ENSMUST00000102276 96 ntBASIC0.47□□□□□ -2.33
Col18a1P39061 Gm24903-201ENSMUST00000158131 126 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 1068.1 ms