Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm22459-201ENSMUST00000082577 108 ntBASIC-0.37□□□□□ -2.47
Trim54Q9ERP3 Gm22165-201ENSMUST00000158414 103 ntBASIC-0.38□□□□□ -2.47
Trim54Q9ERP3 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.38□□□□□ -2.47
Trim54Q9ERP3 Gm24091-201ENSMUST00000082550 83 ntBASIC-0.38□□□□□ -2.47
Trim54Q9ERP3 Gm23711-201ENSMUST00000083856 83 ntBASIC-0.38□□□□□ -2.47
Trim54Q9ERP3 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.39□□□□□ -2.47
Trim54Q9ERP3 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.4□□□□□ -2.47
Trim54Q9ERP3 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.4□□□□□ -2.47
Trim54Q9ERP3 Gm27937-201ENSMUST00000183605 88 ntBASIC-0.4□□□□□ -2.47
Trim54Q9ERP3 AC158537.2-201ENSMUST00000223575 150 ntBASIC-0.4□□□□□ -2.47
Trim54Q9ERP3 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.41□□□□□ -2.48
Trim54Q9ERP3 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.41□□□□□ -2.48
Trim54Q9ERP3 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.41□□□□□ -2.48
Trim54Q9ERP3 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.41□□□□□ -2.48
Trim54Q9ERP3 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.42□□□□□ -2.48
Trim54Q9ERP3 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Gm44481-201ENSMUST00000197288 84 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Gm44339-201ENSMUST00000200598 84 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.43□□□□□ -2.48
Trim54Q9ERP3 Mir717-201ENSMUST00000102259 109 ntBASIC-0.44□□□□□ -2.48
Trim54Q9ERP3 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.44□□□□□ -2.48
Trim54Q9ERP3 Gm23726-201ENSMUST00000178937 67 ntBASIC-0.44□□□□□ -2.48
Trim54Q9ERP3 Gm25609-201ENSMUST00000104019 104 ntBASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm22413-201ENSMUST00000175465 85 ntBASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm27263-201ENSMUST00000184760 76 ntBASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.45□□□□□ -2.48
Trim54Q9ERP3 Gm24070-201ENSMUST00000104519 130 ntBASIC-0.46□□□□□ -2.48
Trim54Q9ERP3 Gm25644-201ENSMUST00000083209 107 ntBASIC-0.46□□□□□ -2.48
Trim54Q9ERP3 Gm25542-201ENSMUST00000116889 94 ntBASIC-0.47□□□□□ -2.48
Trim54Q9ERP3 Gm25112-201ENSMUST00000122680 104 ntBASIC-0.47□□□□□ -2.48
Trim54Q9ERP3 Gm25061-201ENSMUST00000104665 107 ntBASIC-0.48□□□□□ -2.49
Trim54Q9ERP3 Gm23306-201ENSMUST00000179058 105 ntBASIC-0.48□□□□□ -2.49
Trim54Q9ERP3 Mir7043-201ENSMUST00000184219 70 ntBASIC-0.48□□□□□ -2.49
Trim54Q9ERP3 Gm24377-201ENSMUST00000104398 131 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Gm26499-201ENSMUST00000178544 79 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Gm26096-201ENSMUST00000179084 79 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Gm22298-201ENSMUST00000082662 133 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Gm25854-201ENSMUST00000082792 72 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Mir96-201ENSMUST00000083652 106 ntBASIC-0.49□□□□□ -2.49
Trim54Q9ERP3 Gm25641-201ENSMUST00000175135 108 ntBASIC-0.51□□□□□ -2.49
Trim54Q9ERP3 Gm27554-201ENSMUST00000185074 98 ntBASIC-0.51□□□□□ -2.49
Trim54Q9ERP3 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.51□□□□□ -2.49
Trim54Q9ERP3 Gm22805-201ENSMUST00000082739 107 ntBASIC-0.51□□□□□ -2.49
Trim54Q9ERP3 Gm24988-201ENSMUST00000104460 121 ntBASIC-0.52□□□□□ -2.49
Trim54Q9ERP3 Gm24199-201ENSMUST00000157808 136 ntBASIC-0.52□□□□□ -2.49
Trim54Q9ERP3 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.52□□□□□ -2.49
Trim54Q9ERP3 Gm25440-201ENSMUST00000158279 154 ntBASIC-0.53□□□□□ -2.49
Trim54Q9ERP3 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.53□□□□□ -2.49
Trim54Q9ERP3 Gm22595-201ENSMUST00000104250 130 ntBASIC-0.54□□□□□ -2.5
Trim54Q9ERP3 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.54□□□□□ -2.5
Trim54Q9ERP3 Gm25798-201ENSMUST00000082641 107 ntBASIC-0.54□□□□□ -2.5
Trim54Q9ERP3 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.54□□□□□ -2.5
Trim54Q9ERP3 Gm23812-201ENSMUST00000175156 84 ntBASIC-0.55□□□□□ -2.5
Trim54Q9ERP3 Gm23374-201ENSMUST00000175408 84 ntBASIC-0.55□□□□□ -2.5
Trim54Q9ERP3 Gm22335-201ENSMUST00000157724 99 ntBASIC-0.56□□□□□ -2.5
Trim54Q9ERP3 Gm22429-201ENSMUST00000158553 130 ntBASIC-0.56□□□□□ -2.5
Trim54Q9ERP3 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.57□□□□□ -2.5
Trim54Q9ERP3 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.57□□□□□ -2.5
Trim54Q9ERP3 Gm25417-201ENSMUST00000104212 131 ntBASIC-0.58□□□□□ -2.5
Trim54Q9ERP3 Gm24197-201ENSMUST00000175085 109 ntBASIC-0.58□□□□□ -2.5
Trim54Q9ERP3 Gm23017-201ENSMUST00000177583 72 ntBASIC-0.58□□□□□ -2.5
Trim54Q9ERP3 Gm25879-201ENSMUST00000104330 107 ntBASIC-0.59□□□□□ -2.5
Trim54Q9ERP3 Gm23652-201ENSMUST00000116752 107 ntBASIC-0.59□□□□□ -2.5
Trim54Q9ERP3 Gm24674-201ENSMUST00000179194 104 ntBASIC-0.59□□□□□ -2.5
Trim54Q9ERP3 Gm25740-201ENSMUST00000180247 107 ntBASIC-0.59□□□□□ -2.5
Trim54Q9ERP3 Gm24201-201ENSMUST00000082946 125 ntBASIC-0.59□□□□□ -2.5
Trim54Q9ERP3 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.6□□□□□ -2.51
Trim54Q9ERP3 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.61□□□□□ -2.51
Trim54Q9ERP3 Gm24971-201ENSMUST00000175581 110 ntBASIC-0.61□□□□□ -2.51
Trim54Q9ERP3 Mir183-201ENSMUST00000083685 70 ntBASIC-0.61□□□□□ -2.51
Trim54Q9ERP3 Gm24336-201ENSMUST00000104203 146 ntBASIC-0.62□□□□□ -2.51
Trim54Q9ERP3 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.62□□□□□ -2.51
Trim54Q9ERP3 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.62□□□□□ -2.51
Trim54Q9ERP3 Gm22251-201ENSMUST00000083216 107 ntBASIC-0.62□□□□□ -2.51
Trim54Q9ERP3 Gm23038-201ENSMUST00000083873 104 ntBASIC-0.62□□□□□ -2.51
Trim54Q9ERP3 Gm24400-201ENSMUST00000157865 107 ntBASIC-0.63□□□□□ -2.51
Trim54Q9ERP3 Gm22013-201ENSMUST00000158788 103 ntBASIC-0.64□□□□□ -2.51
Trim54Q9ERP3 Gm27784-201ENSMUST00000184926 113 ntBASIC-0.64□□□□□ -2.51
Trim54Q9ERP3 CT571266.1-201ENSMUST00000222859 153 ntBASIC-0.64□□□□□ -2.51
Trim54Q9ERP3 Gm25652-201ENSMUST00000083780 103 ntBASIC-0.64□□□□□ -2.51
Trim54Q9ERP3 Gm11333-201ENSMUST00000119479 148 ntBASIC-0.65□□□□□ -2.51
Trim54Q9ERP3 Mir6964-201ENSMUST00000200252 59 ntBASIC-0.65□□□□□ -2.51
Trim54Q9ERP3 Gm26104-201ENSMUST00000157250 108 ntBASIC-0.66□□□□□ -2.52
Trim54Q9ERP3 Gm22539-201ENSMUST00000158167 117 ntBASIC-0.66□□□□□ -2.52
Trim54Q9ERP3 Gm24946-201ENSMUST00000158332 106 ntBASIC-0.66□□□□□ -2.52
Trim54Q9ERP3 Mir876-201ENSMUST00000104659 81 ntBASIC-0.67□□□□□ -2.52
Trim54Q9ERP3 AC122335.1-201ENSMUST00000217587 175 ntBASIC-0.67□□□□□ -2.52
Trim54Q9ERP3 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.68□□□□□ -2.52
Trim54Q9ERP3 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.68□□□□□ -2.52
Trim54Q9ERP3 Snord50a-201ENSMUST00000178154 72 ntBASIC-0.68□□□□□ -2.52
Trim54Q9ERP3 Gm24463-201ENSMUST00000178417 72 ntBASIC-0.68□□□□□ -2.52
Trim54Q9ERP3 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-0.69□□□□□ -2.52
Trim54Q9ERP3 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-0.69□□□□□ -2.52
Trim54Q9ERP3 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
Retrieved 100 of 76,532 protein–RNA pairs in 202.3 ms