Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm23261-201ENSMUST00000158316 136 ntBASIC-1.32□□□□□ -2.62
Lrif1Q8CDD9 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.33□□□□□ -2.62
Lrif1Q8CDD9 Gm42773-201ENSMUST00000196962 148 ntBASIC-1.33□□□□□ -2.62
Lrif1Q8CDD9 Gm22335-201ENSMUST00000157724 99 ntBASIC-1.34□□□□□ -2.62
Lrif1Q8CDD9 Gm25449-201ENSMUST00000179389 79 ntBASIC-1.34□□□□□ -2.62
Lrif1Q8CDD9 Gm43943-201ENSMUST00000204201 113 ntBASIC-1.34□□□□□ -2.62
Lrif1Q8CDD9 Mir466-201ENSMUST00000093591 73 ntBASIC-1.34□□□□□ -2.62
Lrif1Q8CDD9 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.35□□□□□ -2.63
Lrif1Q8CDD9 Gm22490-201ENSMUST00000157188 119 ntBASIC-1.35□□□□□ -2.63
Lrif1Q8CDD9 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
Lrif1Q8CDD9 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.35□□□□□ -2.63
Lrif1Q8CDD9 Gm37832-201ENSMUST00000118935 189 ntBASIC-1.36□□□□□ -2.63
Lrif1Q8CDD9 Gm24183-201ENSMUST00000122572 93 ntBASIC-1.36□□□□□ -2.63
Lrif1Q8CDD9 Mir136-201ENSMUST00000199494 62 ntBASIC-1.36□□□□□ -2.63
Lrif1Q8CDD9 Gm25684-201ENSMUST00000083941 107 ntBASIC-1.36□□□□□ -2.63
Lrif1Q8CDD9 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC-1.36□□□□□ -2.63
Lrif1Q8CDD9 Mir741-201ENSMUST00000103931 71 ntBASIC-1.37□□□□□ -2.63
Lrif1Q8CDD9 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.37□□□□□ -2.63
Lrif1Q8CDD9 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-1.37□□□□□ -2.63
Lrif1Q8CDD9 Gm25229-201ENSMUST00000178587 79 ntBASIC-1.37□□□□□ -2.63
Lrif1Q8CDD9 Gm22677-201ENSMUST00000116977 108 ntBASIC-1.38□□□□□ -2.63
Lrif1Q8CDD9 Gm22286-201ENSMUST00000179708 107 ntBASIC-1.38□□□□□ -2.63
Lrif1Q8CDD9 Gm27784-201ENSMUST00000184926 113 ntBASIC-1.38□□□□□ -2.63
Lrif1Q8CDD9 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.39□□□□□ -2.63
Lrif1Q8CDD9 Gm22770-201ENSMUST00000158368 67 ntBASIC-1.4□□□□□ -2.63
Lrif1Q8CDD9 Gm25641-201ENSMUST00000175135 108 ntBASIC-1.4□□□□□ -2.63
Lrif1Q8CDD9 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.4□□□□□ -2.63
Lrif1Q8CDD9 Gm22539-201ENSMUST00000158167 117 ntBASIC-1.41□□□□□ -2.64
Lrif1Q8CDD9 Gm22070-201ENSMUST00000178475 107 ntBASIC-1.41□□□□□ -2.64
Lrif1Q8CDD9 Gm25915-201ENSMUST00000104265 126 ntBASIC-1.42□□□□□ -2.64
Lrif1Q8CDD9 Gm25920-201ENSMUST00000158307 99 ntBASIC-1.42□□□□□ -2.64
Lrif1Q8CDD9 Gm23138-201ENSMUST00000083365 103 ntBASIC-1.42□□□□□ -2.64
Lrif1Q8CDD9 Gm24099-201ENSMUST00000083384 107 ntBASIC-1.42□□□□□ -2.64
Lrif1Q8CDD9 Gm25609-201ENSMUST00000104019 104 ntBASIC-1.43□□□□□ -2.64
Lrif1Q8CDD9 Gm25440-201ENSMUST00000158279 154 ntBASIC-1.43□□□□□ -2.64
Lrif1Q8CDD9 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.43□□□□□ -2.64
Lrif1Q8CDD9 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.44□□□□□ -2.64
Lrif1Q8CDD9 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.44□□□□□ -2.64
Lrif1Q8CDD9 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.44□□□□□ -2.64
Lrif1Q8CDD9 Mir543-201ENSMUST00000102286 76 ntBASIC-1.45□□□□□ -2.64
Lrif1Q8CDD9 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.45□□□□□ -2.64
Lrif1Q8CDD9 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.46□□□□□ -2.64
Lrif1Q8CDD9 Gm23578-201ENSMUST00000103943 104 ntBASIC-1.47□□□□□ -2.64
Lrif1Q8CDD9 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.47□□□□□ -2.64
Lrif1Q8CDD9 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.47□□□□□ -2.64
Lrif1Q8CDD9 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.47□□□□□ -2.64
Lrif1Q8CDD9 mt-Tf-201ENSMUST00000082387 68 ntBASIC-1.47□□□□□ -2.64
Lrif1Q8CDD9 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.47□□□□□ -2.64
Lrif1Q8CDD9 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.48□□□□□ -2.65
Lrif1Q8CDD9 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.48□□□□□ -2.65
Lrif1Q8CDD9 Gm44589-201ENSMUST00000207025 115 ntBASIC-1.48□□□□□ -2.65
Lrif1Q8CDD9 Gm26425-201ENSMUST00000122529 82 ntBASIC-1.49□□□□□ -2.65
Lrif1Q8CDD9 Gm22605-201ENSMUST00000158289 108 ntBASIC-1.49□□□□□ -2.65
Lrif1Q8CDD9 Gm23630-201ENSMUST00000175292 104 ntBASIC-1.49□□□□□ -2.65
Lrif1Q8CDD9 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.49□□□□□ -2.65
Lrif1Q8CDD9 Gm25322-201ENSMUST00000122556 104 ntBASIC-1.5□□□□□ -2.65
Lrif1Q8CDD9 Gm23955-201ENSMUST00000157214 100 ntBASIC-1.5□□□□□ -2.65
Lrif1Q8CDD9 Gm23350-201ENSMUST00000158429 103 ntBASIC-1.5□□□□□ -2.65
Lrif1Q8CDD9 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.5□□□□□ -2.65
Lrif1Q8CDD9 Gm27554-201ENSMUST00000185074 98 ntBASIC-1.5□□□□□ -2.65
Lrif1Q8CDD9 Gm25089-201ENSMUST00000102015 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm25840-201ENSMUST00000177821 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm24952-201ENSMUST00000177909 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm23682-201ENSMUST00000178146 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm24652-201ENSMUST00000178223 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm22629-201ENSMUST00000178272 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm24021-201ENSMUST00000178435 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm22274-201ENSMUST00000178441 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm22050-201ENSMUST00000178442 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm23688-201ENSMUST00000178502 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm23944-201ENSMUST00000178607 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm26283-201ENSMUST00000178625 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm25452-201ENSMUST00000178776 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm23286-201ENSMUST00000178963 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm22640-201ENSMUST00000179035 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm25984-201ENSMUST00000179129 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm25585-201ENSMUST00000179469 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm26374-201ENSMUST00000179737 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm24040-201ENSMUST00000179786 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm25017-201ENSMUST00000179805 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm23618-201ENSMUST00000179912 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm26284-201ENSMUST00000180107 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm24570-201ENSMUST00000180314 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Gm24654-201ENSMUST00000180315 79 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 mt-Ts1-201ENSMUST00000082403 69 ntBASIC-1.51□□□□□ -2.65
Lrif1Q8CDD9 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-1.52□□□□□ -2.65
Lrif1Q8CDD9 Gm24637-201ENSMUST00000158674 85 ntBASIC-1.52□□□□□ -2.65
Lrif1Q8CDD9 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC-1.52□□□□□ -2.65
Lrif1Q8CDD9 Gm22413-201ENSMUST00000175465 85 ntBASIC-1.52□□□□□ -2.65
Lrif1Q8CDD9 Gm27975-201ENSMUST00000184400 101 ntBASIC-1.52□□□□□ -2.65
Lrif1Q8CDD9 Snord16a-201ENSMUST00000083895 99 ntBASIC-1.52□□□□□ -2.65
Lrif1Q8CDD9 Gm24701-201ENSMUST00000101946 105 ntBASIC-1.53□□□□□ -2.65
Lrif1Q8CDD9 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
Lrif1Q8CDD9 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.53□□□□□ -2.65
Lrif1Q8CDD9 Gm24676-201ENSMUST00000158758 75 ntBASIC-1.53□□□□□ -2.65
Lrif1Q8CDD9 Gm23369-201ENSMUST00000175406 105 ntBASIC-1.53□□□□□ -2.65
Lrif1Q8CDD9 Gm24201-201ENSMUST00000082946 125 ntBASIC-1.53□□□□□ -2.65
Lrif1Q8CDD9 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
Lrif1Q8CDD9 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.54□□□□□ -2.66
Lrif1Q8CDD9 Gm25964-201ENSMUST00000157171 97 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 76,532 protein–RNA pairs in 162.5 ms