Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC122327.1-201ENSMUST00000220778 108 ntBASIC-1.9□□□□□ -2.71
Sdc1P18828 AC158537.2-201ENSMUST00000223575 150 ntBASIC-1.9□□□□□ -2.71
Sdc1P18828 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.91□□□□□ -2.72
Sdc1P18828 Gm22605-201ENSMUST00000158289 108 ntBASIC-1.91□□□□□ -2.72
Sdc1P18828 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.91□□□□□ -2.72
Sdc1P18828 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.91□□□□□ -2.72
Sdc1P18828 Gm24162-201ENSMUST00000093665 102 ntBASIC-1.91□□□□□ -2.72
Sdc1P18828 Gm24637-201ENSMUST00000158674 85 ntBASIC-1.92□□□□□ -2.72
Sdc1P18828 Gm25678-201ENSMUST00000174984 73 ntBASIC-1.92□□□□□ -2.72
Sdc1P18828 Gm25449-201ENSMUST00000179389 79 ntBASIC-1.92□□□□□ -2.72
Sdc1P18828 Snord70-201ENSMUST00000104157 87 ntBASIC-1.93□□□□□ -2.72
Sdc1P18828 Gm23306-201ENSMUST00000179058 105 ntBASIC-1.93□□□□□ -2.72
Sdc1P18828 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.93□□□□□ -2.72
Sdc1P18828 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.93□□□□□ -2.72
Sdc1P18828 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC-1.93□□□□□ -2.72
Sdc1P18828 Gm44322-201ENSMUST00000196830 115 ntBASIC-1.94□□□□□ -2.72
Sdc1P18828 Gm22677-201ENSMUST00000116977 108 ntBASIC-1.95□□□□□ -2.72
Sdc1P18828 Mir7231-201ENSMUST00000196252 61 ntBASIC-1.95□□□□□ -2.72
Sdc1P18828 Gm27975-201ENSMUST00000184400 101 ntBASIC-1.96□□□□□ -2.72
Sdc1P18828 mt-Tv-201ENSMUST00000082389 69 ntBASIC-1.96□□□□□ -2.72
Sdc1P18828 Mir122-201ENSMUST00000083468 66 ntBASIC-1.96□□□□□ -2.72
Sdc1P18828 Gm23988-201ENSMUST00000117034 122 ntBASIC-1.98□□□□□ -2.73
Sdc1P18828 Gm24946-201ENSMUST00000158332 106 ntBASIC-1.98□□□□□ -2.73
Sdc1P18828 Gm25071-201ENSMUST00000175232 70 ntBASIC-1.98□□□□□ -2.73
Sdc1P18828 Gm44859-201ENSMUST00000207831 94 ntBASIC-1.98□□□□□ -2.73
Sdc1P18828 AC161271.1-201ENSMUST00000226914 150 ntBASIC-1.98□□□□□ -2.73
Sdc1P18828 Gm26425-201ENSMUST00000122529 82 ntBASIC-1.99□□□□□ -2.73
Sdc1P18828 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.99□□□□□ -2.73
Sdc1P18828 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.99□□□□□ -2.73
Sdc1P18828 Gm24916-201ENSMUST00000157287 79 ntBASIC-2□□□□□ -2.73
Sdc1P18828 Gm25646-201ENSMUST00000178527 79 ntBASIC-2□□□□□ -2.73
Sdc1P18828 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-2.01□□□□□ -2.73
Sdc1P18828 Gm25915-201ENSMUST00000104265 126 ntBASIC-2.01□□□□□ -2.73
Sdc1P18828 Gm24673-201ENSMUST00000116948 124 ntBASIC-2.01□□□□□ -2.73
Sdc1P18828 Gm23108-201ENSMUST00000178295 124 ntBASIC-2.01□□□□□ -2.73
Sdc1P18828 AC164561.1-201ENSMUST00000220414 115 ntBASIC-2.01□□□□□ -2.73
Sdc1P18828 Gm23590-201ENSMUST00000157661 104 ntBASIC-2.02□□□□□ -2.73
Sdc1P18828 Gm2077-201ENSMUST00000195017 319 ntBASIC-2.02□□□□□ -2.73
Sdc1P18828 Gm26499-201ENSMUST00000178544 79 ntBASIC-2.03□□□□□ -2.73
Sdc1P18828 Gm26096-201ENSMUST00000179084 79 ntBASIC-2.03□□□□□ -2.73
Sdc1P18828 Gm22385-201ENSMUST00000158189 101 ntBASIC-2.04□□□□□ -2.74
Sdc1P18828 Mir7218-201ENSMUST00000200050 59 ntBASIC-2.04□□□□□ -2.74
Sdc1P18828 Snora2b-201ENSMUST00000084005 137 ntBASIC-2.04□□□□□ -2.74
Sdc1P18828 Gm25753-201ENSMUST00000116792 121 ntBASIC-2.05□□□□□ -2.74
Sdc1P18828 Gm23477-201ENSMUST00000158882 128 ntBASIC-2.05□□□□□ -2.74
Sdc1P18828 Gm24650-201ENSMUST00000157105 103 ntBASIC-2.06□□□□□ -2.74
Sdc1P18828 CT030170.1-201ENSMUST00000222183 148 ntBASIC-2.07□□□□□ -2.74
Sdc1P18828 Mir181b-1-201ENSMUST00000083524 80 ntBASIC-2.07□□□□□ -2.74
Sdc1P18828 Gm26253-201ENSMUST00000122493 103 ntBASIC-2.08□□□□□ -2.74
Sdc1P18828 Gm22384-201ENSMUST00000158187 104 ntBASIC-2.08□□□□□ -2.74
Sdc1P18828 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC-2.09□□□□□ -2.74
Sdc1P18828 Gm22297-201ENSMUST00000083312 106 ntBASIC-2.09□□□□□ -2.74
Sdc1P18828 Gm22490-201ENSMUST00000157188 119 ntBASIC-2.1□□□□□ -2.75
Sdc1P18828 Gm26412-201ENSMUST00000157666 55 ntBASIC-2.1□□□□□ -2.75
Sdc1P18828 Gm25995-201ENSMUST00000175396 142 ntBASIC-2.1□□□□□ -2.75
Sdc1P18828 Gm26441-201ENSMUST00000082590 104 ntBASIC-2.1□□□□□ -2.75
Sdc1P18828 Gm25401-201ENSMUST00000082975 106 ntBASIC-2.1□□□□□ -2.75
Sdc1P18828 Gm23138-201ENSMUST00000083365 103 ntBASIC-2.1□□□□□ -2.75
Sdc1P18828 Gm24099-201ENSMUST00000083384 107 ntBASIC-2.1□□□□□ -2.75
Sdc1P18828 Gm22783-201ENSMUST00000104089 107 ntBASIC-2.11□□□□□ -2.75
Sdc1P18828 Mir367-201ENSMUST00000083479 75 ntBASIC-2.11□□□□□ -2.75
Sdc1P18828 Gm10813-201ENSMUST00000099936 90 ntBASIC-2.11□□□□□ -2.75
Sdc1P18828 Gm25943-201ENSMUST00000103791 90 ntBASIC-2.12□□□□□ -2.75
Sdc1P18828 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-2.12□□□□□ -2.75
Sdc1P18828 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-2.12□□□□□ -2.75
Sdc1P18828 Gm24926-201ENSMUST00000178053 79 ntBASIC-2.12□□□□□ -2.75
Sdc1P18828 Gm22632-201ENSMUST00000178266 79 ntBASIC-2.12□□□□□ -2.75
Sdc1P18828 Gm22070-201ENSMUST00000178475 107 ntBASIC-2.12□□□□□ -2.75
Sdc1P18828 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC-2.12□□□□□ -2.75
Sdc1P18828 Mir466b-4-201ENSMUST00000178801 90 ntBASIC-2.12□□□□□ -2.75
Sdc1P18828 Gm25285-201ENSMUST00000178951 90 ntBASIC-2.12□□□□□ -2.75
Sdc1P18828 Mir466b-6-201ENSMUST00000180061 90 ntBASIC-2.12□□□□□ -2.75
Sdc1P18828 Mir466c-2-201ENSMUST00000180211 90 ntBASIC-2.12□□□□□ -2.75
Sdc1P18828 Gm23468-201ENSMUST00000157125 108 ntBASIC-2.13□□□□□ -2.75
Sdc1P18828 Gm23751-201ENSMUST00000157583 136 ntBASIC-2.13□□□□□ -2.75
Sdc1P18828 Gm25798-201ENSMUST00000082641 107 ntBASIC-2.13□□□□□ -2.75
Sdc1P18828 Mir15b-201ENSMUST00000083646 64 ntBASIC-2.14□□□□□ -2.75
Sdc1P18828 Mir876-201ENSMUST00000104659 81 ntBASIC-2.15□□□□□ -2.75
Sdc1P18828 Gm23817-201ENSMUST00000158449 104 ntBASIC-2.15□□□□□ -2.75
Sdc1P18828 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-2.15□□□□□ -2.75
Sdc1P18828 Gm27366-201ENSMUST00000184967 108 ntBASIC-2.16□□□□□ -2.76
Sdc1P18828 Gm23790-201ENSMUST00000083013 107 ntBASIC-2.16□□□□□ -2.76
Sdc1P18828 Gm25087-201ENSMUST00000101992 78 ntBASIC-2.17□□□□□ -2.76
Sdc1P18828 Gm26466-201ENSMUST00000179615 79 ntBASIC-2.17□□□□□ -2.76
Sdc1P18828 Gm22458-201ENSMUST00000082576 107 ntBASIC-2.17□□□□□ -2.76
Sdc1P18828 Gm26467-201ENSMUST00000097257 78 ntBASIC-2.17□□□□□ -2.76
Sdc1P18828 Gm26491-201ENSMUST00000179268 121 ntBASIC-2.18□□□□□ -2.76
Sdc1P18828 Gm23421-201ENSMUST00000158934 104 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm25098-201ENSMUST00000177580 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm23356-201ENSMUST00000177610 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm24027-201ENSMUST00000177611 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm22511-201ENSMUST00000177628 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm22630-201ENSMUST00000177781 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm23560-201ENSMUST00000177782 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm25462-201ENSMUST00000177833 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm26059-201ENSMUST00000177865 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm22255-201ENSMUST00000177933 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm25146-201ENSMUST00000177976 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm25523-201ENSMUST00000178044 79 ntBASIC-2.19□□□□□ -2.76
Sdc1P18828 Gm24585-201ENSMUST00000178104 79 ntBASIC-2.19□□□□□ -2.76
Retrieved 100 of 76,532 protein–RNA pairs in 422.6 ms