Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 Gm25497-201ENSMUST00000104425 132 ntBASIC0.17□□□□□ -2.38
Nedd9O35177 Gm23494-201ENSMUST00000116830 126 ntBASIC0.17□□□□□ -2.38
Nedd9O35177 Gm25522-201ENSMUST00000158394 105 ntBASIC0.17□□□□□ -2.38
Nedd9O35177 Gm23477-201ENSMUST00000158882 128 ntBASIC0.17□□□□□ -2.38
Nedd9O35177 Gm25952-201ENSMUST00000175329 74 ntBASIC0.17□□□□□ -2.38
Nedd9O35177 Gm24201-201ENSMUST00000082946 125 ntBASIC0.17□□□□□ -2.38
Nedd9O35177 Snora62-201ENSMUST00000082991 149 ntBASIC0.17□□□□□ -2.38
Nedd9O35177 Gm24918-201ENSMUST00000083022 130 ntBASIC0.17□□□□□ -2.38
Nedd9O35177 Mir34c-201ENSMUST00000083653 77 ntBASIC0.17□□□□□ -2.38
Nedd9O35177 Mir717-201ENSMUST00000102259 109 ntBASIC0.16□□□□□ -2.38
Nedd9O35177 Mir876-201ENSMUST00000104659 81 ntBASIC0.16□□□□□ -2.38
Nedd9O35177 Gm23036-201ENSMUST00000157885 99 ntBASIC0.16□□□□□ -2.38
Nedd9O35177 Gm23159-201ENSMUST00000175088 77 ntBASIC0.16□□□□□ -2.38
Nedd9O35177 Gm22069-201ENSMUST00000179911 107 ntBASIC0.15□□□□□ -2.39
Nedd9O35177 Gm44328-201ENSMUST00000199331 75 ntBASIC0.15□□□□□ -2.39
Nedd9O35177 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Nedd9O35177 Gm23761-201ENSMUST00000158347 104 ntBASIC0.14□□□□□ -2.39
Nedd9O35177 Gm22095-201ENSMUST00000158984 150 ntBASIC0.14□□□□□ -2.39
Nedd9O35177 Gm24378-201ENSMUST00000122699 106 ntBASIC0.13□□□□□ -2.39
Nedd9O35177 Gm22943-201ENSMUST00000158564 76 ntBASIC0.13□□□□□ -2.39
Nedd9O35177 Gm27263-201ENSMUST00000184760 76 ntBASIC0.13□□□□□ -2.39
Nedd9O35177 Mir15b-201ENSMUST00000083646 64 ntBASIC0.13□□□□□ -2.39
Nedd9O35177 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.12□□□□□ -2.39
Nedd9O35177 Snord45b-201ENSMUST00000082797 71 ntBASIC0.12□□□□□ -2.39
Nedd9O35177 Mir297-1-201ENSMUST00000103800 76 ntBASIC0.11□□□□□ -2.39
Nedd9O35177 Gm23442-201ENSMUST00000082919 134 ntBASIC0.11□□□□□ -2.39
Nedd9O35177 Gm22048-201ENSMUST00000104721 89 ntBASIC0.1□□□□□ -2.39
Nedd9O35177 Snord85-201ENSMUST00000083262 73 ntBASIC0.1□□□□□ -2.39
Nedd9O35177 Gm26485-201ENSMUST00000158019 64 ntBASIC0.09□□□□□ -2.4
Nedd9O35177 Gm23017-201ENSMUST00000177583 72 ntBASIC0.09□□□□□ -2.4
Nedd9O35177 Mir494-201ENSMUST00000093632 85 ntBASIC0.09□□□□□ -2.4
Nedd9O35177 Gm22595-201ENSMUST00000104250 130 ntBASIC0.08□□□□□ -2.4
Nedd9O35177 Mir3089-201ENSMUST00000175350 84 ntBASIC0.08□□□□□ -2.4
Nedd9O35177 Mir344-2-201ENSMUST00000175446 80 ntBASIC0.08□□□□□ -2.4
Nedd9O35177 mt-Tl2-201ENSMUST00000082417 71 ntBASIC0.08□□□□□ -2.4
Nedd9O35177 Gm22368-201ENSMUST00000102416 109 ntBASIC0.07□□□□□ -2.4
Nedd9O35177 Gm23856-201ENSMUST00000158380 99 ntBASIC0.07□□□□□ -2.4
Nedd9O35177 Gm25885-201ENSMUST00000157779 109 ntBASIC0.06□□□□□ -2.4
Nedd9O35177 Gm24400-201ENSMUST00000157865 107 ntBASIC0.06□□□□□ -2.4
Nedd9O35177 Gm24843-201ENSMUST00000158682 76 ntBASIC0.06□□□□□ -2.4
Nedd9O35177 Gm11966-201ENSMUST00000119907 87 ntBASIC0.05□□□□□ -2.4
Nedd9O35177 Mir7651-201ENSMUST00000184154 64 ntBASIC0.05□□□□□ -2.4
Nedd9O35177 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
Nedd9O35177 Gm23785-201ENSMUST00000116741 96 ntBASIC0.04□□□□□ -2.4
Nedd9O35177 Gm24331-201ENSMUST00000175099 67 ntBASIC0.04□□□□□ -2.4
Nedd9O35177 Gm23801-201ENSMUST00000175561 67 ntBASIC0.04□□□□□ -2.4
Nedd9O35177 Gm24485-201ENSMUST00000178283 67 ntBASIC0.04□□□□□ -2.4
Nedd9O35177 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.04□□□□□ -2.4
Nedd9O35177 Gm22067-201ENSMUST00000122790 107 ntBASIC0.03□□□□□ -2.4
Nedd9O35177 Gm22327-201ENSMUST00000158899 108 ntBASIC0.03□□□□□ -2.4
Nedd9O35177 Gm22298-201ENSMUST00000082662 133 ntBASIC0.03□□□□□ -2.4
Nedd9O35177 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Nedd9O35177 Gm23749-201ENSMUST00000104223 131 ntBASIC0.01□□□□□ -2.41
Nedd9O35177 Gm24903-201ENSMUST00000158131 126 ntBASIC0.01□□□□□ -2.41
Nedd9O35177 Gm38208-201ENSMUST00000192476 114 ntBASIC0.01□□□□□ -2.41
Nedd9O35177 Mir327-201ENSMUST00000199328 69 ntBASIC0.01□□□□□ -2.41
Nedd9O35177 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.01□□□□□ -2.41
Nedd9O35177 Gm23590-201ENSMUST00000157661 104 ntBASIC-0.01□□□□□ -2.41
Nedd9O35177 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.01□□□□□ -2.41
Nedd9O35177 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC-0.02□□□□□ -2.41
Nedd9O35177 Gm25847-201ENSMUST00000116793 96 ntBASIC-0.04□□□□□ -2.42
Nedd9O35177 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.04□□□□□ -2.42
Nedd9O35177 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.05□□□□□ -2.42
Nedd9O35177 Mir382-201ENSMUST00000083494 76 ntBASIC-0.05□□□□□ -2.42
Nedd9O35177 Mir141-201ENSMUST00000083540 72 ntBASIC-0.05□□□□□ -2.42
Nedd9O35177 Gm26257-201ENSMUST00000122500 107 ntBASIC-0.07□□□□□ -2.42
Nedd9O35177 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.07□□□□□ -2.42
Nedd9O35177 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.08□□□□□ -2.42
Nedd9O35177 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.08□□□□□ -2.42
Nedd9O35177 Gm22540-201ENSMUST00000158168 117 ntBASIC-0.09□□□□□ -2.42
Nedd9O35177 Mir7231-201ENSMUST00000196252 61 ntBASIC-0.09□□□□□ -2.42
Nedd9O35177 Gm23237-201ENSMUST00000104639 92 ntBASIC-0.1□□□□□ -2.43
Nedd9O35177 Gm23072-201ENSMUST00000158243 123 ntBASIC-0.1□□□□□ -2.43
Nedd9O35177 Gm26491-201ENSMUST00000179268 121 ntBASIC-0.1□□□□□ -2.43
Nedd9O35177 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.1□□□□□ -2.43
Nedd9O35177 Gm22717-201ENSMUST00000122703 171 ntBASIC-0.11□□□□□ -2.43
Nedd9O35177 Gm23955-201ENSMUST00000157214 100 ntBASIC-0.12□□□□□ -2.43
Nedd9O35177 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.12□□□□□ -2.43
Nedd9O35177 Mir672-201ENSMUST00000102331 100 ntBASIC-0.14□□□□□ -2.43
Nedd9O35177 Gm25552-201ENSMUST00000158081 91 ntBASIC-0.14□□□□□ -2.43
Nedd9O35177 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.14□□□□□ -2.43
Nedd9O35177 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.15□□□□□ -2.43
Nedd9O35177 Gm23649-201ENSMUST00000179007 107 ntBASIC-0.15□□□□□ -2.43
Nedd9O35177 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.15□□□□□ -2.43
Nedd9O35177 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.15□□□□□ -2.43
Nedd9O35177 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.15□□□□□ -2.43
Nedd9O35177 Gm25648-201ENSMUST00000177844 79 ntBASIC-0.16□□□□□ -2.44
Nedd9O35177 Gm29344-201ENSMUST00000068143 210 ntBASIC-0.16□□□□□ -2.44
Nedd9O35177 Gm24612-201ENSMUST00000083267 107 ntBASIC-0.16□□□□□ -2.44
Nedd9O35177 Gm37832-201ENSMUST00000118935 189 ntBASIC-0.17□□□□□ -2.44
Nedd9O35177 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.17□□□□□ -2.44
Nedd9O35177 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.17□□□□□ -2.44
Nedd9O35177 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.18□□□□□ -2.44
Nedd9O35177 Gm23826-201ENSMUST00000157394 119 ntBASIC-0.18□□□□□ -2.44
Nedd9O35177 Gm25183-201ENSMUST00000157752 106 ntBASIC-0.18□□□□□ -2.44
Nedd9O35177 AC238676.2-201ENSMUST00000220910 94 ntBASIC-0.18□□□□□ -2.44
Nedd9O35177 Snord57-201ENSMUST00000083338 72 ntBASIC-0.18□□□□□ -2.44
Nedd9O35177 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
Nedd9O35177 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.19□□□□□ -2.44
Nedd9O35177 Gm24226-201ENSMUST00000158826 97 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 152.3 ms