Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm27711-201ENSMUST00000183802 118 ntBASIC1.27□□□□□ -2.21
Usp40Q8BWR4 Mir6985-201ENSMUST00000184641 61 ntBASIC1.27□□□□□ -2.21
Usp40Q8BWR4 Gm42677-201ENSMUST00000196363 127 ntBASIC1.27□□□□□ -2.21
Usp40Q8BWR4 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Usp40Q8BWR4 Gm25656-201ENSMUST00000158466 66 ntBASIC1.26□□□□□ -2.21
Usp40Q8BWR4 Gm26007-201ENSMUST00000158798 120 ntBASIC1.26□□□□□ -2.21
Usp40Q8BWR4 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.26□□□□□ -2.21
Usp40Q8BWR4 Mir10b-201ENSMUST00000083566 68 ntBASIC1.26□□□□□ -2.21
Usp40Q8BWR4 Gm26259-201ENSMUST00000104778 97 ntBASIC1.25□□□□□ -2.21
Usp40Q8BWR4 Gm22233-201ENSMUST00000157464 114 ntBASIC1.25□□□□□ -2.21
Usp40Q8BWR4 Gm24808-201ENSMUST00000157993 118 ntBASIC1.25□□□□□ -2.21
Usp40Q8BWR4 Gm25868-201ENSMUST00000158253 114 ntBASIC1.25□□□□□ -2.21
Usp40Q8BWR4 Gm22074-201ENSMUST00000158595 113 ntBASIC1.25□□□□□ -2.21
Usp40Q8BWR4 Mir6380-201ENSMUST00000184334 81 ntBASIC1.25□□□□□ -2.21
Usp40Q8BWR4 Gm23245-201ENSMUST00000083370 135 ntBASIC1.25□□□□□ -2.21
Usp40Q8BWR4 Gm24259-201ENSMUST00000083740 107 ntBASIC1.25□□□□□ -2.21
Usp40Q8BWR4 Gm24531-201ENSMUST00000157945 100 ntBASIC1.24□□□□□ -2.21
Usp40Q8BWR4 Gm25222-201ENSMUST00000158199 126 ntBASIC1.24□□□□□ -2.21
Usp40Q8BWR4 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.24□□□□□ -2.21
Usp40Q8BWR4 Gm27587-201ENSMUST00000185116 163 ntBASIC1.24□□□□□ -2.21
Usp40Q8BWR4 Mir1904-201ENSMUST00000122702 80 ntBASIC1.23□□□□□ -2.21
Usp40Q8BWR4 Gm22016-201ENSMUST00000158793 114 ntBASIC1.23□□□□□ -2.21
Usp40Q8BWR4 Gm22298-201ENSMUST00000082662 133 ntBASIC1.23□□□□□ -2.21
Usp40Q8BWR4 Mir717-201ENSMUST00000102259 109 ntBASIC1.22□□□□□ -2.21
Usp40Q8BWR4 Gm24342-201ENSMUST00000103907 104 ntBASIC1.22□□□□□ -2.21
Usp40Q8BWR4 Gm23955-201ENSMUST00000157214 100 ntBASIC1.22□□□□□ -2.21
Usp40Q8BWR4 Gm23590-201ENSMUST00000157661 104 ntBASIC1.22□□□□□ -2.21
Usp40Q8BWR4 Mir3079-201ENSMUST00000175428 90 ntBASIC1.22□□□□□ -2.21
Usp40Q8BWR4 Gm44211-201ENSMUST00000204867 145 ntBASIC1.22□□□□□ -2.21
Usp40Q8BWR4 Gm45125-201ENSMUST00000206908 151 ntBASIC1.21□□□□□ -2.22
Usp40Q8BWR4 Gm24271-201ENSMUST00000102327 111 ntBASIC1.2□□□□□ -2.22
Usp40Q8BWR4 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.2□□□□□ -2.22
Usp40Q8BWR4 Gm23853-201ENSMUST00000158375 104 ntBASIC1.2□□□□□ -2.22
Usp40Q8BWR4 Gm23416-201ENSMUST00000175520 95 ntBASIC1.2□□□□□ -2.22
Usp40Q8BWR4 Gm25138-201ENSMUST00000083248 136 ntBASIC1.2□□□□□ -2.22
Usp40Q8BWR4 Gm25894-201ENSMUST00000083458 75 ntBASIC1.2□□□□□ -2.22
Usp40Q8BWR4 Gm26338-201ENSMUST00000102372 110 ntBASIC1.19□□□□□ -2.22
Usp40Q8BWR4 Gm22965-201ENSMUST00000157958 101 ntBASIC1.19□□□□□ -2.22
Usp40Q8BWR4 Gm25993-201ENSMUST00000175391 80 ntBASIC1.19□□□□□ -2.22
Usp40Q8BWR4 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.19□□□□□ -2.22
Usp40Q8BWR4 Gm27980-201ENSMUST00000184094 169 ntBASIC1.19□□□□□ -2.22
Usp40Q8BWR4 Gm25307-201ENSMUST00000158885 106 ntBASIC1.18□□□□□ -2.22
Usp40Q8BWR4 Gm25802-201ENSMUST00000082639 77 ntBASIC1.18□□□□□ -2.22
Usp40Q8BWR4 Mir344-201ENSMUST00000083634 95 ntBASIC1.18□□□□□ -2.22
Usp40Q8BWR4 Gm25326-201ENSMUST00000101903 107 ntBASIC1.17□□□□□ -2.22
Usp40Q8BWR4 Gm23573-201ENSMUST00000104408 107 ntBASIC1.17□□□□□ -2.22
Usp40Q8BWR4 Gm25886-201ENSMUST00000157780 114 ntBASIC1.17□□□□□ -2.22
Usp40Q8BWR4 Gm22746-201ENSMUST00000082494 107 ntBASIC1.17□□□□□ -2.22
Usp40Q8BWR4 Gm24321-201ENSMUST00000175348 80 ntBASIC1.16□□□□□ -2.22
Usp40Q8BWR4 Gm24218-201ENSMUST00000180163 105 ntBASIC1.16□□□□□ -2.22
Usp40Q8BWR4 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Usp40Q8BWR4 Gm23180-201ENSMUST00000158686 125 ntBASIC1.15□□□□□ -2.23
Usp40Q8BWR4 Gm23017-201ENSMUST00000177583 72 ntBASIC1.15□□□□□ -2.23
Usp40Q8BWR4 Gm27974-201ENSMUST00000183415 105 ntBASIC1.15□□□□□ -2.23
Usp40Q8BWR4 Gm27263-201ENSMUST00000184760 76 ntBASIC1.15□□□□□ -2.23
Usp40Q8BWR4 Gm44490-201ENSMUST00000198566 127 ntBASIC1.15□□□□□ -2.23
Usp40Q8BWR4 AC129019.2-201ENSMUST00000222063 202 ntBASIC1.15□□□□□ -2.23
Usp40Q8BWR4 Gm24796-201ENSMUST00000104007 107 ntBASIC1.14□□□□□ -2.23
Usp40Q8BWR4 Gm24508-201ENSMUST00000180104 107 ntBASIC1.14□□□□□ -2.23
Usp40Q8BWR4 Snord57-201ENSMUST00000083338 72 ntBASIC1.14□□□□□ -2.23
Usp40Q8BWR4 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Usp40Q8BWR4 Gm23036-201ENSMUST00000157885 99 ntBASIC1.13□□□□□ -2.23
Usp40Q8BWR4 Gm25166-201ENSMUST00000158909 111 ntBASIC1.13□□□□□ -2.23
Usp40Q8BWR4 Gm42533-201ENSMUST00000196247 157 ntBASIC1.13□□□□□ -2.23
Usp40Q8BWR4 Mir7010-201ENSMUST00000183464 63 ntBASIC1.12□□□□□ -2.23
Usp40Q8BWR4 Gm44327-201ENSMUST00000200068 117 ntBASIC1.12□□□□□ -2.23
Usp40Q8BWR4 Gm25296-201ENSMUST00000082566 67 ntBASIC1.12□□□□□ -2.23
Usp40Q8BWR4 Mir200b-201ENSMUST00000083615 70 ntBASIC1.12□□□□□ -2.23
Usp40Q8BWR4 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.11□□□□□ -2.23
Usp40Q8BWR4 Gm24579-201ENSMUST00000103964 144 ntBASIC1.11□□□□□ -2.23
Usp40Q8BWR4 Gm23008-201ENSMUST00000158946 80 ntBASIC1.11□□□□□ -2.23
Usp40Q8BWR4 Gm24920-201ENSMUST00000083018 85 ntBASIC1.11□□□□□ -2.23
Usp40Q8BWR4 Gm22357-201ENSMUST00000082882 83 ntBASIC1.1□□□□□ -2.23
Usp40Q8BWR4 Mir7091-201ENSMUST00000184075 79 ntBASIC1.09□□□□□ -2.23
Usp40Q8BWR4 Gm42845-201ENSMUST00000197766 105 ntBASIC1.09□□□□□ -2.23
Usp40Q8BWR4 Gm26306-201ENSMUST00000157773 119 ntBASIC1.08□□□□□ -2.24
Usp40Q8BWR4 Gm24710-201ENSMUST00000175235 101 ntBASIC1.08□□□□□ -2.24
Usp40Q8BWR4 Mir15a-201ENSMUST00000175266 84 ntBASIC1.08□□□□□ -2.24
Usp40Q8BWR4 Gm24135-201ENSMUST00000179085 101 ntBASIC1.08□□□□□ -2.24
Usp40Q8BWR4 Mir23a-201ENSMUST00000083677 75 ntBASIC1.08□□□□□ -2.24
Usp40Q8BWR4 Gm13577-201ENSMUST00000121365 205 ntBASIC1.07□□□□□ -2.24
Usp40Q8BWR4 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.07□□□□□ -2.24
Usp40Q8BWR4 Gm24777-201ENSMUST00000157644 107 ntBASIC1.07□□□□□ -2.24
Usp40Q8BWR4 Mir3109-201ENSMUST00000175301 88 ntBASIC1.07□□□□□ -2.24
Usp40Q8BWR4 AC125190.3-201ENSMUST00000223224 121 ntBASIC1.07□□□□□ -2.24
Usp40Q8BWR4 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.06□□□□□ -2.24
Usp40Q8BWR4 Gm24555-201ENSMUST00000104548 124 ntBASIC1.05□□□□□ -2.24
Usp40Q8BWR4 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Usp40Q8BWR4 Gm23494-201ENSMUST00000116830 126 ntBASIC1.05□□□□□ -2.24
Usp40Q8BWR4 Gm22542-201ENSMUST00000158166 95 ntBASIC1.05□□□□□ -2.24
Usp40Q8BWR4 Gm6607-201ENSMUST00000215035 328 ntBASIC1.05□□□□□ -2.24
Usp40Q8BWR4 Gm23787-201ENSMUST00000122538 73 ntBASIC1.04□□□□□ -2.24
Usp40Q8BWR4 Gm44455-201ENSMUST00000200061 82 ntBASIC1.04□□□□□ -2.24
Usp40Q8BWR4 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
Usp40Q8BWR4 Gm22455-201ENSMUST00000082580 71 ntBASIC1.03□□□□□ -2.24
Usp40Q8BWR4 Gm25275-201ENSMUST00000104297 129 ntBASIC1.02□□□□□ -2.25
Usp40Q8BWR4 Gm23735-201ENSMUST00000082551 134 ntBASIC1.02□□□□□ -2.25
Usp40Q8BWR4 mt-Tw-201ENSMUST00000082397 67 ntBASIC1□□□□□ -2.25
Usp40Q8BWR4 Gm24323-201ENSMUST00000175342 77 ntBASIC0.99□□□□□ -2.25
Usp40Q8BWR4 Gm22303-201ENSMUST00000082686 122 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 149.2 ms