Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm23570-201ENSMUST00000083029 104 ntBASIC0.67□□□□□ -2.3
Ddb1Q3U1J4 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.67□□□□□ -2.3
Ddb1Q3U1J4 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Ddb1Q3U1J4 Gm23531-201ENSMUST00000104567 68 ntBASIC0.66□□□□□ -2.3
Ddb1Q3U1J4 Mir7077-201ENSMUST00000183991 57 ntBASIC0.66□□□□□ -2.3
Ddb1Q3U1J4 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.66□□□□□ -2.3
Ddb1Q3U1J4 Mir1187-201ENSMUST00000116936 122 ntBASIC0.65□□□□□ -2.31
Ddb1Q3U1J4 Gm26484-201ENSMUST00000158018 106 ntBASIC0.65□□□□□ -2.31
Ddb1Q3U1J4 Mir3105-201ENSMUST00000175480 85 ntBASIC0.65□□□□□ -2.31
Ddb1Q3U1J4 Mir6896-201ENSMUST00000198033 73 ntBASIC0.65□□□□□ -2.31
Ddb1Q3U1J4 Gm44457-201ENSMUST00000198109 76 ntBASIC0.65□□□□□ -2.31
Ddb1Q3U1J4 Gm23376-201ENSMUST00000082938 160 ntBASIC0.65□□□□□ -2.31
Ddb1Q3U1J4 Mir7673-201ENSMUST00000184567 64 ntBASIC0.64□□□□□ -2.31
Ddb1Q3U1J4 Gm23056-201ENSMUST00000082803 111 ntBASIC0.64□□□□□ -2.31
Ddb1Q3U1J4 Gm24278-201ENSMUST00000104239 127 ntBASIC0.63□□□□□ -2.31
Ddb1Q3U1J4 Gm23500-201ENSMUST00000157735 98 ntBASIC0.63□□□□□ -2.31
Ddb1Q3U1J4 Gm22539-201ENSMUST00000158167 117 ntBASIC0.63□□□□□ -2.31
Ddb1Q3U1J4 Gm44828-201ENSMUST00000203745 106 ntBASIC0.63□□□□□ -2.31
Ddb1Q3U1J4 Gm22303-201ENSMUST00000082686 122 ntBASIC0.63□□□□□ -2.31
Ddb1Q3U1J4 Mir224-201ENSMUST00000083608 82 ntBASIC0.63□□□□□ -2.31
Ddb1Q3U1J4 Gm26007-201ENSMUST00000158798 120 ntBASIC0.62□□□□□ -2.31
Ddb1Q3U1J4 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.62□□□□□ -2.31
Ddb1Q3U1J4 Gm22048-201ENSMUST00000104721 89 ntBASIC0.61□□□□□ -2.31
Ddb1Q3U1J4 Gm24963-201ENSMUST00000157916 144 ntBASIC0.61□□□□□ -2.31
Ddb1Q3U1J4 Gm25798-201ENSMUST00000082641 107 ntBASIC0.61□□□□□ -2.31
Ddb1Q3U1J4 Mir363-201ENSMUST00000093598 75 ntBASIC0.61□□□□□ -2.31
Ddb1Q3U1J4 Gm25993-201ENSMUST00000175391 80 ntBASIC0.6□□□□□ -2.31
Ddb1Q3U1J4 Gm25609-201ENSMUST00000104019 104 ntBASIC0.59□□□□□ -2.31
Ddb1Q3U1J4 Gm14533-201ENSMUST00000117088 93 ntBASIC0.59□□□□□ -2.31
Ddb1Q3U1J4 Gm22067-201ENSMUST00000122790 107 ntBASIC0.59□□□□□ -2.31
Ddb1Q3U1J4 Gm23020-201ENSMUST00000158766 253 ntBASIC0.59□□□□□ -2.31
Ddb1Q3U1J4 Gm24495-201ENSMUST00000178575 79 ntBASIC0.59□□□□□ -2.31
Ddb1Q3U1J4 Gm22253-201ENSMUST00000179870 79 ntBASIC0.59□□□□□ -2.31
Ddb1Q3U1J4 Gm45655-201ENSMUST00000211625 160 ntBASIC0.59□□□□□ -2.31
Ddb1Q3U1J4 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.58□□□□□ -2.32
Ddb1Q3U1J4 Gm25296-201ENSMUST00000082566 67 ntBASIC0.58□□□□□ -2.32
Ddb1Q3U1J4 Gm25885-201ENSMUST00000157779 109 ntBASIC0.57□□□□□ -2.32
Ddb1Q3U1J4 Gm6293-201ENSMUST00000050339 195 ntBASIC0.57□□□□□ -2.32
Ddb1Q3U1J4 Gm25656-201ENSMUST00000158466 66 ntBASIC0.56□□□□□ -2.32
Ddb1Q3U1J4 Gm45541-201ENSMUST00000210443 54 ntBASIC0.56□□□□□ -2.32
Ddb1Q3U1J4 Gm22302-201ENSMUST00000082657 106 ntBASIC0.56□□□□□ -2.32
Ddb1Q3U1J4 Mir670-201ENSMUST00000102380 100 ntBASIC0.55□□□□□ -2.32
Ddb1Q3U1J4 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Ddb1Q3U1J4 Mir3064-201ENSMUST00000175532 67 ntBASIC0.55□□□□□ -2.32
Ddb1Q3U1J4 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Ddb1Q3U1J4 Mir3071-201ENSMUST00000093621 80 ntBASIC0.55□□□□□ -2.32
Ddb1Q3U1J4 Gm22239-201ENSMUST00000175220 103 ntBASIC0.54□□□□□ -2.32
Ddb1Q3U1J4 Gm20305-201ENSMUST00000193226 177 ntBASIC0.54□□□□□ -2.32
Ddb1Q3U1J4 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Ddb1Q3U1J4 Gm25440-201ENSMUST00000158279 154 ntBASIC0.53□□□□□ -2.32
Ddb1Q3U1J4 Gm25307-201ENSMUST00000158885 106 ntBASIC0.53□□□□□ -2.32
Ddb1Q3U1J4 AC129019.2-201ENSMUST00000222063 202 ntBASIC0.53□□□□□ -2.32
Ddb1Q3U1J4 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.53□□□□□ -2.32
Ddb1Q3U1J4 Gm22459-201ENSMUST00000082577 108 ntBASIC0.53□□□□□ -2.32
Ddb1Q3U1J4 Mir34c-201ENSMUST00000083653 77 ntBASIC0.53□□□□□ -2.32
Ddb1Q3U1J4 Gm25408-201ENSMUST00000104104 133 ntBASIC0.52□□□□□ -2.33
Ddb1Q3U1J4 Gm24946-201ENSMUST00000158332 106 ntBASIC0.52□□□□□ -2.33
Ddb1Q3U1J4 Gm23726-201ENSMUST00000178937 67 ntBASIC0.52□□□□□ -2.33
Ddb1Q3U1J4 Gm43432-201ENSMUST00000196352 121 ntBASIC0.52□□□□□ -2.33
Ddb1Q3U1J4 Gm22981-201ENSMUST00000082611 75 ntBASIC0.52□□□□□ -2.33
Ddb1Q3U1J4 Gm22759-201ENSMUST00000102276 96 ntBASIC0.51□□□□□ -2.33
Ddb1Q3U1J4 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Ddb1Q3U1J4 Gm23785-201ENSMUST00000116741 96 ntBASIC0.51□□□□□ -2.33
Ddb1Q3U1J4 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Ddb1Q3U1J4 Gm23969-201ENSMUST00000083324 74 ntBASIC0.5□□□□□ -2.33
Ddb1Q3U1J4 Gm23856-201ENSMUST00000158380 99 ntBASIC0.49□□□□□ -2.33
Ddb1Q3U1J4 Mir141-201ENSMUST00000083540 72 ntBASIC0.49□□□□□ -2.33
Ddb1Q3U1J4 Gm22087-201ENSMUST00000158339 88 ntBASIC0.48□□□□□ -2.33
Ddb1Q3U1J4 Gm27937-201ENSMUST00000183605 88 ntBASIC0.48□□□□□ -2.33
Ddb1Q3U1J4 mt-Tl2-201ENSMUST00000082417 71 ntBASIC0.48□□□□□ -2.33
Ddb1Q3U1J4 Mir18-201ENSMUST00000083469 96 ntBASIC0.48□□□□□ -2.33
Ddb1Q3U1J4 Mir710-201ENSMUST00000102088 110 ntBASIC0.47□□□□□ -2.33
Ddb1Q3U1J4 Gm22542-201ENSMUST00000158166 95 ntBASIC0.47□□□□□ -2.33
Ddb1Q3U1J4 Gm23761-201ENSMUST00000158347 104 ntBASIC0.47□□□□□ -2.33
Ddb1Q3U1J4 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.47□□□□□ -2.33
Ddb1Q3U1J4 Gm22455-201ENSMUST00000082580 71 ntBASIC0.47□□□□□ -2.33
Ddb1Q3U1J4 Gm26303-201ENSMUST00000116845 119 ntBASIC0.46□□□□□ -2.34
Ddb1Q3U1J4 Gm26116-201ENSMUST00000175600 77 ntBASIC0.46□□□□□ -2.34
Ddb1Q3U1J4 Gm42677-201ENSMUST00000196363 127 ntBASIC0.46□□□□□ -2.34
Ddb1Q3U1J4 Gm44345-201ENSMUST00000199560 135 ntBASIC0.46□□□□□ -2.34
Ddb1Q3U1J4 Mir494-201ENSMUST00000093632 85 ntBASIC0.46□□□□□ -2.34
Ddb1Q3U1J4 Gm22165-201ENSMUST00000158414 103 ntBASIC0.45□□□□□ -2.34
Ddb1Q3U1J4 Gm22095-201ENSMUST00000158984 150 ntBASIC0.45□□□□□ -2.34
Ddb1Q3U1J4 Gm44803-201ENSMUST00000204384 156 ntBASIC0.45□□□□□ -2.34
Ddb1Q3U1J4 Gm24378-201ENSMUST00000122699 106 ntBASIC0.44□□□□□ -2.34
Ddb1Q3U1J4 Gm26485-201ENSMUST00000158019 64 ntBASIC0.44□□□□□ -2.34
Ddb1Q3U1J4 Gm24331-201ENSMUST00000175099 67 ntBASIC0.44□□□□□ -2.34
Ddb1Q3U1J4 Gm23801-201ENSMUST00000175561 67 ntBASIC0.44□□□□□ -2.34
Ddb1Q3U1J4 Gm24485-201ENSMUST00000178283 67 ntBASIC0.44□□□□□ -2.34
Ddb1Q3U1J4 Gm27977-201ENSMUST00000185159 111 ntBASIC0.44□□□□□ -2.34
Ddb1Q3U1J4 Gm27554-201ENSMUST00000185074 98 ntBASIC0.43□□□□□ -2.34
Ddb1Q3U1J4 Gm24201-201ENSMUST00000082946 125 ntBASIC0.43□□□□□ -2.34
Ddb1Q3U1J4 Gm24793-201ENSMUST00000104289 132 ntBASIC0.42□□□□□ -2.34
Ddb1Q3U1J4 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.42□□□□□ -2.34
Ddb1Q3U1J4 Mir7065-201ENSMUST00000185110 61 ntBASIC0.42□□□□□ -2.34
Ddb1Q3U1J4 Gm24918-201ENSMUST00000083022 130 ntBASIC0.42□□□□□ -2.34
Ddb1Q3U1J4 Gm23237-201ENSMUST00000104639 92 ntBASIC0.41□□□□□ -2.34
Ddb1Q3U1J4 Gm25847-201ENSMUST00000116793 96 ntBASIC0.41□□□□□ -2.34
Ddb1Q3U1J4 Gm27475-201ENSMUST00000183420 61 ntBASIC0.41□□□□□ -2.34
Ddb1Q3U1J4 Gm25309-201ENSMUST00000116728 126 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 159 ms