Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm27722-201ENSMUST00000183908 76 ntBASIC1.39□□□□□ -2.19
Col18a1P39061 Gm27607-201ENSMUST00000185162 122 ntBASIC1.39□□□□□ -2.19
Col18a1P39061 Gm25040-201ENSMUST00000103877 66 ntBASIC1.38□□□□□ -2.19
Col18a1P39061 Mir1933-201ENSMUST00000158930 88 ntBASIC1.38□□□□□ -2.19
Col18a1P39061 Gm22260-201ENSMUST00000178643 107 ntBASIC1.38□□□□□ -2.19
Col18a1P39061 Gm45754-201ENSMUST00000212380 279 ntBASIC1.38□□□□□ -2.19
Col18a1P39061 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.38□□□□□ -2.19
Col18a1P39061 Mir107-201ENSMUST00000083660 87 ntBASIC1.38□□□□□ -2.19
Col18a1P39061 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Col18a1P39061 Snord69-201ENSMUST00000104024 80 ntBASIC1.37□□□□□ -2.19
Col18a1P39061 Gm25055-201ENSMUST00000157369 76 ntBASIC1.37□□□□□ -2.19
Col18a1P39061 Gm24467-201ENSMUST00000157887 126 ntBASIC1.37□□□□□ -2.19
Col18a1P39061 Gm22466-201ENSMUST00000175278 69 ntBASIC1.37□□□□□ -2.19
Col18a1P39061 Gm24555-201ENSMUST00000104548 124 ntBASIC1.36□□□□□ -2.19
Col18a1P39061 Gm23172-201ENSMUST00000157160 124 ntBASIC1.36□□□□□ -2.19
Col18a1P39061 U6.1-201ENSMUST00000157443 101 ntBASIC1.36□□□□□ -2.19
Col18a1P39061 Mir1955-201ENSMUST00000158014 98 ntBASIC1.36□□□□□ -2.19
Col18a1P39061 Gm22165-201ENSMUST00000158414 103 ntBASIC1.36□□□□□ -2.19
Col18a1P39061 Gm24165-201ENSMUST00000082718 128 ntBASIC1.36□□□□□ -2.19
Col18a1P39061 Mir709-201ENSMUST00000102190 88 ntBASIC1.36□□□□□ -2.19
Col18a1P39061 Gm25779-201ENSMUST00000116710 95 ntBASIC1.36□□□□□ -2.19
Col18a1P39061 Mir1961-201ENSMUST00000158643 112 ntBASIC1.36□□□□□ -2.19
Col18a1P39061 Gm24323-201ENSMUST00000175342 77 ntBASIC1.36□□□□□ -2.19
Col18a1P39061 Mir873a-201ENSMUST00000104863 77 ntBASIC1.35□□□□□ -2.19
Col18a1P39061 Gm22298-201ENSMUST00000082662 133 ntBASIC1.35□□□□□ -2.19
Col18a1P39061 Gm24459-201ENSMUST00000082730 86 ntBASIC1.35□□□□□ -2.19
Col18a1P39061 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Col18a1P39061 Mir125b-1-201ENSMUST00000175613 77 ntBASIC1.34□□□□□ -2.19
Col18a1P39061 Gm27717-201ENSMUST00000183933 151 ntBASIC1.34□□□□□ -2.19
Col18a1P39061 Mir1949-202ENSMUST00000199259 70 ntBASIC1.34□□□□□ -2.19
Col18a1P39061 Gm44962-201ENSMUST00000206460 279 ntBASIC1.34□□□□□ -2.2
Col18a1P39061 AC129019.2-201ENSMUST00000222063 202 ntBASIC1.34□□□□□ -2.2
Col18a1P39061 Gm26227-201ENSMUST00000082510 101 ntBASIC1.34□□□□□ -2.2
Col18a1P39061 Mir324-201ENSMUST00000083600 89 ntBASIC1.34□□□□□ -2.2
Col18a1P39061 Gm24233-201ENSMUST00000104317 122 ntBASIC1.33□□□□□ -2.2
Col18a1P39061 Gm25663-201ENSMUST00000157698 135 ntBASIC1.33□□□□□ -2.2
Col18a1P39061 Gm25656-201ENSMUST00000158466 66 ntBASIC1.33□□□□□ -2.2
Col18a1P39061 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.33□□□□□ -2.2
Col18a1P39061 Gm24579-201ENSMUST00000103964 144 ntBASIC1.32□□□□□ -2.2
Col18a1P39061 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Col18a1P39061 Gm27511-201ENSMUST00000183502 127 ntBASIC1.32□□□□□ -2.2
Col18a1P39061 Gm42533-201ENSMUST00000196247 157 ntBASIC1.32□□□□□ -2.2
Col18a1P39061 Mir181b-1-201ENSMUST00000083524 80 ntBASIC1.32□□□□□ -2.2
Col18a1P39061 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
Col18a1P39061 Gm23130-201ENSMUST00000104252 74 ntBASIC1.31□□□□□ -2.2
Col18a1P39061 Gm26038-201ENSMUST00000158151 106 ntBASIC1.31□□□□□ -2.2
Col18a1P39061 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
Col18a1P39061 Gm23321-201ENSMUST00000104465 126 ntBASIC1.3□□□□□ -2.2
Col18a1P39061 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.3□□□□□ -2.2
Col18a1P39061 Snora62-201ENSMUST00000082991 149 ntBASIC1.3□□□□□ -2.2
Col18a1P39061 Gm16399-201ENSMUST00000181423 219 ntBASIC1.29□□□□□ -2.2
Col18a1P39061 Mir7675-201ENSMUST00000184262 58 ntBASIC1.29□□□□□ -2.2
Col18a1P39061 Gm24222-201ENSMUST00000158834 93 ntBASIC1.29□□□□□ -2.2
Col18a1P39061 Gm27980-201ENSMUST00000184094 169 ntBASIC1.29□□□□□ -2.2
Col18a1P39061 Gm44396-201ENSMUST00000199843 114 ntBASIC1.29□□□□□ -2.2
Col18a1P39061 Gm24865-201ENSMUST00000103246 96 ntBASIC1.28□□□□□ -2.2
Col18a1P39061 Gm26274-201ENSMUST00000157103 321 ntBASIC1.28□□□□□ -2.2
Col18a1P39061 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.28□□□□□ -2.2
Col18a1P39061 Gm6272-201ENSMUST00000121256 171 ntBASIC1.27□□□□□ -2.21
Col18a1P39061 Snord13-201ENSMUST00000157627 104 ntBASIC1.27□□□□□ -2.21
Col18a1P39061 Gm25375-201ENSMUST00000158157 135 ntBASIC1.27□□□□□ -2.21
Col18a1P39061 Gm13065-201ENSMUST00000119178 141 ntBASIC1.26□□□□□ -2.21
Col18a1P39061 Mir6380-201ENSMUST00000184334 81 ntBASIC1.26□□□□□ -2.21
Col18a1P39061 Gm27263-201ENSMUST00000184760 76 ntBASIC1.26□□□□□ -2.21
Col18a1P39061 Gm44483-201ENSMUST00000197203 97 ntBASIC1.26□□□□□ -2.21
Col18a1P39061 Gm24920-201ENSMUST00000083018 85 ntBASIC1.26□□□□□ -2.21
Col18a1P39061 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
Col18a1P39061 Gm25307-201ENSMUST00000158885 106 ntBASIC1.26□□□□□ -2.21
Col18a1P39061 Gm23017-201ENSMUST00000177583 72 ntBASIC1.26□□□□□ -2.21
Col18a1P39061 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC1.26□□□□□ -2.21
Col18a1P39061 Gm25968-201ENSMUST00000157167 100 ntBASIC1.25□□□□□ -2.21
Col18a1P39061 Gm24262-201ENSMUST00000157431 144 ntBASIC1.25□□□□□ -2.21
Col18a1P39061 Gm25035-201ENSMUST00000175414 77 ntBASIC1.25□□□□□ -2.21
Col18a1P39061 Gm27587-201ENSMUST00000185116 163 ntBASIC1.25□□□□□ -2.21
Col18a1P39061 Mir23a-201ENSMUST00000083677 75 ntBASIC1.25□□□□□ -2.21
Col18a1P39061 Mir223-201ENSMUST00000102112 110 ntBASIC1.24□□□□□ -2.21
Col18a1P39061 Gm22879-201ENSMUST00000082895 74 ntBASIC1.24□□□□□ -2.21
Col18a1P39061 Mir669f-201ENSMUST00000103850 121 ntBASIC1.24□□□□□ -2.21
Col18a1P39061 Gm22785-201ENSMUST00000104087 132 ntBASIC1.24□□□□□ -2.21
Col18a1P39061 Gm20473-201ENSMUST00000173064 112 ntBASIC1.24□□□□□ -2.21
Col18a1P39061 CT030166.3-201ENSMUST00000223203 193 ntBASIC1.24□□□□□ -2.21
Col18a1P39061 Mir500-201ENSMUST00000093600 92 ntBASIC1.24□□□□□ -2.21
Col18a1P39061 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Col18a1P39061 Gm22232-201ENSMUST00000104654 94 ntBASIC1.23□□□□□ -2.21
Col18a1P39061 Gm24381-201ENSMUST00000122697 104 ntBASIC1.23□□□□□ -2.21
Col18a1P39061 Gm22720-201ENSMUST00000122710 87 ntBASIC1.23□□□□□ -2.21
Col18a1P39061 Gm24651-201ENSMUST00000157107 107 ntBASIC1.23□□□□□ -2.21
Col18a1P39061 Gm22485-201ENSMUST00000157990 109 ntBASIC1.23□□□□□ -2.21
Col18a1P39061 Gm25993-201ENSMUST00000175391 80 ntBASIC1.23□□□□□ -2.21
Col18a1P39061 AC125190.3-201ENSMUST00000223224 121 ntBASIC1.23□□□□□ -2.21
Col18a1P39061 Gm26224-201ENSMUST00000082506 80 ntBASIC1.23□□□□□ -2.21
Col18a1P39061 Gm23494-201ENSMUST00000116830 126 ntBASIC1.21□□□□□ -2.22
Col18a1P39061 Gm24372-201ENSMUST00000104400 110 ntBASIC1.2□□□□□ -2.22
Col18a1P39061 Gm24194-201ENSMUST00000116805 90 ntBASIC1.2□□□□□ -2.22
Col18a1P39061 Gm22542-201ENSMUST00000158166 95 ntBASIC1.2□□□□□ -2.22
Col18a1P39061 Gm25296-201ENSMUST00000082566 67 ntBASIC1.2□□□□□ -2.22
Col18a1P39061 Gm23020-201ENSMUST00000158766 253 ntBASIC1.19□□□□□ -2.22
Col18a1P39061 Mir3109-201ENSMUST00000175301 88 ntBASIC1.19□□□□□ -2.22
Col18a1P39061 Mir3079-201ENSMUST00000175428 90 ntBASIC1.19□□□□□ -2.22
Col18a1P39061 Gm23989-201ENSMUST00000117030 66 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 321.9 ms