Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Mir7015-201ENSMUST00000199525 64 ntBASIC-1.59□□□□□ -2.66
Sdc1P18828 Gm25425-201ENSMUST00000157611 96 ntBASIC-1.6□□□□□ -2.67
Sdc1P18828 Gm26092-201ENSMUST00000179798 97 ntBASIC-1.6□□□□□ -2.67
Sdc1P18828 Mir669a-1-201ENSMUST00000180238 97 ntBASIC-1.6□□□□□ -2.67
Sdc1P18828 Gm24459-201ENSMUST00000082730 86 ntBASIC-1.6□□□□□ -2.67
Sdc1P18828 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-1.61□□□□□ -2.67
Sdc1P18828 Mir741-201ENSMUST00000103931 71 ntBASIC-1.61□□□□□ -2.67
Sdc1P18828 Gm24051-201ENSMUST00000158622 75 ntBASIC-1.61□□□□□ -2.67
Sdc1P18828 AC140930.2-201ENSMUST00000221803 109 ntBASIC-1.61□□□□□ -2.67
Sdc1P18828 Gm23909-201ENSMUST00000104598 131 ntBASIC-1.62□□□□□ -2.67
Sdc1P18828 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.62□□□□□ -2.67
Sdc1P18828 Mir466m-201ENSMUST00000175052 84 ntBASIC-1.62□□□□□ -2.67
Sdc1P18828 Gm22621-201ENSMUST00000179678 74 ntBASIC-1.62□□□□□ -2.67
Sdc1P18828 AC165138.1-201ENSMUST00000226984 270 ntBASIC-1.62□□□□□ -2.67
Sdc1P18828 Gm26109-201ENSMUST00000083970 70 ntBASIC-1.62□□□□□ -2.67
Sdc1P18828 Mir1948-201ENSMUST00000157325 85 ntBASIC-1.63□□□□□ -2.67
Sdc1P18828 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.63□□□□□ -2.67
Sdc1P18828 AC122335.1-201ENSMUST00000217587 175 ntBASIC-1.63□□□□□ -2.67
Sdc1P18828 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.63□□□□□ -2.67
Sdc1P18828 Snord57-201ENSMUST00000083338 72 ntBASIC-1.63□□□□□ -2.67
Sdc1P18828 Gm25684-201ENSMUST00000083941 107 ntBASIC-1.63□□□□□ -2.67
Sdc1P18828 Gm25653-201ENSMUST00000158473 138 ntBASIC-1.64□□□□□ -2.67
Sdc1P18828 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC-1.64□□□□□ -2.67
Sdc1P18828 Gm24047-201ENSMUST00000102405 104 ntBASIC-1.65□□□□□ -2.67
Sdc1P18828 Gm24183-201ENSMUST00000122572 93 ntBASIC-1.65□□□□□ -2.67
Sdc1P18828 Gm25619-201ENSMUST00000122621 104 ntBASIC-1.65□□□□□ -2.67
Sdc1P18828 Gm38298-201ENSMUST00000193578 118 ntBASIC-1.65□□□□□ -2.67
Sdc1P18828 Gm26225-201ENSMUST00000082508 135 ntBASIC-1.65□□□□□ -2.67
Sdc1P18828 Gm24203-201ENSMUST00000082949 114 ntBASIC-1.65□□□□□ -2.67
Sdc1P18828 Mir7-1-201ENSMUST00000083500 108 ntBASIC-1.66□□□□□ -2.68
Sdc1P18828 Gm25601-201ENSMUST00000158356 105 ntBASIC-1.67□□□□□ -2.68
Sdc1P18828 Mir5619-201ENSMUST00000176065 61 ntBASIC-1.67□□□□□ -2.68
Sdc1P18828 Gm25229-201ENSMUST00000178587 79 ntBASIC-1.67□□□□□ -2.68
Sdc1P18828 Gm20108-201ENSMUST00000219977 153 ntBASIC-1.67□□□□□ -2.68
Sdc1P18828 Gm43038-201ENSMUST00000202359 88 ntBASIC-1.68□□□□□ -2.68
Sdc1P18828 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.68□□□□□ -2.68
Sdc1P18828 AC161426.1-201ENSMUST00000214137 286 ntBASIC-1.68□□□□□ -2.68
Sdc1P18828 mt-Tt-201ENSMUST00000082422 67 ntBASIC-1.68□□□□□ -2.68
Sdc1P18828 Gm22672-201ENSMUST00000104414 134 ntBASIC-1.69□□□□□ -2.68
Sdc1P18828 Mir7086-201ENSMUST00000183683 65 ntBASIC-1.69□□□□□ -2.68
Sdc1P18828 Gm27686-201ENSMUST00000185123 91 ntBASIC-1.69□□□□□ -2.68
Sdc1P18828 Mir5117-201ENSMUST00000083226 84 ntBASIC-1.69□□□□□ -2.68
Sdc1P18828 Mir1898-201ENSMUST00000122643 83 ntBASIC-1.7□□□□□ -2.68
Sdc1P18828 Gm25429-201ENSMUST00000157607 132 ntBASIC-1.7□□□□□ -2.68
Sdc1P18828 Gm44470-201ENSMUST00000203913 142 ntBASIC-1.7□□□□□ -2.68
Sdc1P18828 AC132833.2-201ENSMUST00000228699 157 ntBASIC-1.7□□□□□ -2.68
Sdc1P18828 Gm22454-201ENSMUST00000082583 107 ntBASIC-1.7□□□□□ -2.68
Sdc1P18828 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.71□□□□□ -2.68
Sdc1P18828 Gm24801-201ENSMUST00000178503 105 ntBASIC-1.71□□□□□ -2.68
Sdc1P18828 mt-Td-201ENSMUST00000082404 70 ntBASIC-1.71□□□□□ -2.68
Sdc1P18828 Gm22429-201ENSMUST00000158553 130 ntBASIC-1.72□□□□□ -2.68
Sdc1P18828 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.72□□□□□ -2.68
Sdc1P18828 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.72□□□□□ -2.68
Sdc1P18828 Gm22430-201ENSMUST00000158546 107 ntBASIC-1.73□□□□□ -2.69
Sdc1P18828 Gm24612-201ENSMUST00000083267 107 ntBASIC-1.73□□□□□ -2.69
Sdc1P18828 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.73□□□□□ -2.69
Sdc1P18828 Gm23316-201ENSMUST00000157997 114 ntBASIC-1.74□□□□□ -2.69
Sdc1P18828 Gm25641-201ENSMUST00000175135 108 ntBASIC-1.74□□□□□ -2.69
Sdc1P18828 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-1.74□□□□□ -2.69
Sdc1P18828 AC166341.8-201ENSMUST00000221267 108 ntBASIC-1.74□□□□□ -2.69
Sdc1P18828 Gm25964-201ENSMUST00000157171 97 ntBASIC-1.75□□□□□ -2.69
Sdc1P18828 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.75□□□□□ -2.69
Sdc1P18828 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.75□□□□□ -2.69
Sdc1P18828 Gm23651-201ENSMUST00000116755 120 ntBASIC-1.76□□□□□ -2.69
Sdc1P18828 Gm26104-201ENSMUST00000157250 108 ntBASIC-1.76□□□□□ -2.69
Sdc1P18828 Gm26337-201ENSMUST00000178000 79 ntBASIC-1.76□□□□□ -2.69
Sdc1P18828 Gm25417-201ENSMUST00000104212 131 ntBASIC-1.78□□□□□ -2.69
Sdc1P18828 Gm27928-201ENSMUST00000183747 256 ntBASIC-1.78□□□□□ -2.69
Sdc1P18828 Gm27935-201ENSMUST00000183894 79 ntBASIC-1.78□□□□□ -2.69
Sdc1P18828 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-1.79□□□□□ -2.7
Sdc1P18828 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.79□□□□□ -2.7
Sdc1P18828 Gm25316-201ENSMUST00000116826 118 ntBASIC-1.8□□□□□ -2.7
Sdc1P18828 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.8□□□□□ -2.7
Sdc1P18828 Gm22205-201ENSMUST00000122655 71 ntBASIC-1.81□□□□□ -2.7
Sdc1P18828 Gm27554-201ENSMUST00000185074 98 ntBASIC-1.81□□□□□ -2.7
Sdc1P18828 Gm10351-201ENSMUST00000087694 125 ntBASIC-1.81□□□□□ -2.7
Sdc1P18828 Mir494-201ENSMUST00000093632 85 ntBASIC-1.81□□□□□ -2.7
Sdc1P18828 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.82□□□□□ -2.7
Sdc1P18828 Gm25315-201ENSMUST00000116823 121 ntBASIC-1.82□□□□□ -2.7
Sdc1P18828 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.82□□□□□ -2.7
Sdc1P18828 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.82□□□□□ -2.7
Sdc1P18828 Gm22413-201ENSMUST00000175465 85 ntBASIC-1.82□□□□□ -2.7
Sdc1P18828 Gm23922-201ENSMUST00000178792 79 ntBASIC-1.82□□□□□ -2.7
Sdc1P18828 Gm24657-201ENSMUST00000180085 79 ntBASIC-1.82□□□□□ -2.7
Sdc1P18828 Gm22996-201ENSMUST00000180236 79 ntBASIC-1.82□□□□□ -2.7
Sdc1P18828 Gm42844-201ENSMUST00000200355 112 ntBASIC-1.82□□□□□ -2.7
Sdc1P18828 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-1.82□□□□□ -2.7
Sdc1P18828 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.83□□□□□ -2.7
Sdc1P18828 Gm25696-201ENSMUST00000082900 105 ntBASIC-1.83□□□□□ -2.7
Sdc1P18828 Gm24725-201ENSMUST00000158229 125 ntBASIC-1.85□□□□□ -2.71
Sdc1P18828 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC-1.87□□□□□ -2.71
Sdc1P18828 Gm23852-201ENSMUST00000158376 77 ntBASIC-1.87□□□□□ -2.71
Sdc1P18828 Gm25609-201ENSMUST00000104019 104 ntBASIC-1.88□□□□□ -2.71
Sdc1P18828 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.88□□□□□ -2.71
Sdc1P18828 Gm22770-201ENSMUST00000158368 67 ntBASIC-1.89□□□□□ -2.71
Sdc1P18828 Gm26468-201ENSMUST00000158644 106 ntBASIC-1.89□□□□□ -2.71
Sdc1P18828 Mir451b-201ENSMUST00000196157 72 ntBASIC-1.89□□□□□ -2.71
Sdc1P18828 Gm25322-201ENSMUST00000122556 104 ntBASIC-1.9□□□□□ -2.71
Sdc1P18828 Gm23434-201ENSMUST00000157179 100 ntBASIC-1.9□□□□□ -2.71
Sdc1P18828 Gm22446-201ENSMUST00000180108 104 ntBASIC-1.9□□□□□ -2.71
Retrieved 100 of 76,532 protein–RNA pairs in 150.8 ms