Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm27450-201ENSMUST00000104632 90 ntBASIC0.77□□□□□ -2.29
Col3a1P08121 Gm26257-201ENSMUST00000122500 107 ntBASIC0.77□□□□□ -2.29
Col3a1P08121 Gm25183-201ENSMUST00000157752 106 ntBASIC0.77□□□□□ -2.29
Col3a1P08121 Gm38274-201ENSMUST00000195689 148 ntBASIC0.77□□□□□ -2.29
Col3a1P08121 Mir101a-201ENSMUST00000083517 83 ntBASIC0.77□□□□□ -2.29
Col3a1P08121 Gm23012-201ENSMUST00000104149 83 ntBASIC0.76□□□□□ -2.29
Col3a1P08121 Gm24233-201ENSMUST00000104317 122 ntBASIC0.76□□□□□ -2.29
Col3a1P08121 Mir3079-201ENSMUST00000175428 90 ntBASIC0.76□□□□□ -2.29
Col3a1P08121 Gm42677-201ENSMUST00000196363 127 ntBASIC0.76□□□□□ -2.29
Col3a1P08121 Gm23989-201ENSMUST00000117030 66 ntBASIC0.75□□□□□ -2.29
Col3a1P08121 Gm22078-201ENSMUST00000157593 103 ntBASIC0.75□□□□□ -2.29
Col3a1P08121 Gm23853-201ENSMUST00000158375 104 ntBASIC0.75□□□□□ -2.29
Col3a1P08121 Gm27937-201ENSMUST00000183605 88 ntBASIC0.75□□□□□ -2.29
Col3a1P08121 Snord95-201ENSMUST00000082846 68 ntBASIC0.75□□□□□ -2.29
Col3a1P08121 Gm24927-201ENSMUST00000083397 107 ntBASIC0.75□□□□□ -2.29
Col3a1P08121 Mir15b-201ENSMUST00000083646 64 ntBASIC0.75□□□□□ -2.29
Col3a1P08121 Gm22233-201ENSMUST00000157464 114 ntBASIC0.74□□□□□ -2.29
Col3a1P08121 Gm25868-201ENSMUST00000158253 114 ntBASIC0.74□□□□□ -2.29
Col3a1P08121 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.74□□□□□ -2.29
Col3a1P08121 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.74□□□□□ -2.29
Col3a1P08121 Mir7673-201ENSMUST00000184567 64 ntBASIC0.73□□□□□ -2.29
Col3a1P08121 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.73□□□□□ -2.29
Col3a1P08121 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Col3a1P08121 Gm25128-201ENSMUST00000083339 76 ntBASIC0.73□□□□□ -2.29
Col3a1P08121 Gm25378-201ENSMUST00000104333 129 ntBASIC0.72□□□□□ -2.29
Col3a1P08121 Gm23531-201ENSMUST00000104567 68 ntBASIC0.72□□□□□ -2.29
Col3a1P08121 Gm26236-201ENSMUST00000175536 137 ntBASIC0.72□□□□□ -2.29
Col3a1P08121 Gm25648-201ENSMUST00000177844 79 ntBASIC0.72□□□□□ -2.29
Col3a1P08121 Mir7010-201ENSMUST00000183464 63 ntBASIC0.72□□□□□ -2.29
Col3a1P08121 Gm26438-201ENSMUST00000082593 107 ntBASIC0.72□□□□□ -2.29
Col3a1P08121 Gm22088-201ENSMUST00000158341 117 ntBASIC0.71□□□□□ -2.3
Col3a1P08121 Gm25656-201ENSMUST00000158466 66 ntBASIC0.71□□□□□ -2.3
Col3a1P08121 Mir6389-201ENSMUST00000183661 102 ntBASIC0.71□□□□□ -2.3
Col3a1P08121 Gm44211-201ENSMUST00000204867 145 ntBASIC0.71□□□□□ -2.3
Col3a1P08121 Gm24701-201ENSMUST00000101946 105 ntBASIC0.7□□□□□ -2.3
Col3a1P08121 Gm14533-201ENSMUST00000117088 93 ntBASIC0.7□□□□□ -2.3
Col3a1P08121 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.7□□□□□ -2.3
Col3a1P08121 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.7□□□□□ -2.3
Col3a1P08121 Gm22039-201ENSMUST00000157278 132 ntBASIC0.7□□□□□ -2.3
Col3a1P08121 Gm23072-201ENSMUST00000158243 123 ntBASIC0.7□□□□□ -2.3
Col3a1P08121 Gm24500-201ENSMUST00000158447 124 ntBASIC0.7□□□□□ -2.3
Col3a1P08121 Gm23416-201ENSMUST00000175520 95 ntBASIC0.7□□□□□ -2.3
Col3a1P08121 Gm26139-201ENSMUST00000180098 107 ntBASIC0.7□□□□□ -2.3
Col3a1P08121 Gm24793-201ENSMUST00000104289 132 ntBASIC0.69□□□□□ -2.3
Col3a1P08121 Gm25108-201ENSMUST00000122473 78 ntBASIC0.69□□□□□ -2.3
Col3a1P08121 Gm23672-201ENSMUST00000157471 107 ntBASIC0.69□□□□□ -2.3
Col3a1P08121 Gm22520-201ENSMUST00000158269 129 ntBASIC0.69□□□□□ -2.3
Col3a1P08121 Gm25440-201ENSMUST00000158279 154 ntBASIC0.69□□□□□ -2.3
Col3a1P08121 Gm22087-201ENSMUST00000158339 88 ntBASIC0.69□□□□□ -2.3
Col3a1P08121 Gm22459-201ENSMUST00000082577 108 ntBASIC0.69□□□□□ -2.3
Col3a1P08121 Gm25055-201ENSMUST00000157369 76 ntBASIC0.68□□□□□ -2.3
Col3a1P08121 Gm25885-201ENSMUST00000157779 109 ntBASIC0.68□□□□□ -2.3
Col3a1P08121 Mir15a-201ENSMUST00000175266 84 ntBASIC0.68□□□□□ -2.3
Col3a1P08121 AC238676.2-201ENSMUST00000220910 94 ntBASIC0.68□□□□□ -2.3
Col3a1P08121 CT030170.1-201ENSMUST00000222183 148 ntBASIC0.68□□□□□ -2.3
Col3a1P08121 Gm24201-201ENSMUST00000082946 125 ntBASIC0.68□□□□□ -2.3
Col3a1P08121 Gm23730-201ENSMUST00000083236 107 ntBASIC0.68□□□□□ -2.3
Col3a1P08121 Mir3071-201ENSMUST00000093621 80 ntBASIC0.68□□□□□ -2.3
Col3a1P08121 Gm25465-201ENSMUST00000157716 105 ntBASIC0.67□□□□□ -2.3
Col3a1P08121 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.67□□□□□ -2.3
Col3a1P08121 Gm24020-201ENSMUST00000180156 108 ntBASIC0.67□□□□□ -2.3
Col3a1P08121 Gm25138-201ENSMUST00000083248 136 ntBASIC0.67□□□□□ -2.3
Col3a1P08121 Gm25652-201ENSMUST00000083780 103 ntBASIC0.67□□□□□ -2.3
Col3a1P08121 Gm25186-201ENSMUST00000083909 108 ntBASIC0.67□□□□□ -2.3
Col3a1P08121 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.67□□□□□ -2.3
Col3a1P08121 Mir487b-201ENSMUST00000102265 82 ntBASIC0.67□□□□□ -2.3
Col3a1P08121 Gm24431-201ENSMUST00000104073 66 ntBASIC0.67□□□□□ -2.3
Col3a1P08121 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Col3a1P08121 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Col3a1P08121 Gm38113-201ENSMUST00000193704 201 ntBASIC0.67□□□□□ -2.3
Col3a1P08121 Gm26338-201ENSMUST00000102372 110 ntBASIC0.66□□□□□ -2.3
Col3a1P08121 Gm27980-201ENSMUST00000184094 169 ntBASIC0.66□□□□□ -2.3
Col3a1P08121 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC0.66□□□□□ -2.3
Col3a1P08121 Gm22302-201ENSMUST00000082657 106 ntBASIC0.66□□□□□ -2.3
Col3a1P08121 Gm25894-201ENSMUST00000083458 75 ntBASIC0.66□□□□□ -2.3
Col3a1P08121 Gm24070-201ENSMUST00000104519 130 ntBASIC0.65□□□□□ -2.31
Col3a1P08121 Gm23036-201ENSMUST00000157885 99 ntBASIC0.65□□□□□ -2.31
Col3a1P08121 Gm24725-201ENSMUST00000158229 125 ntBASIC0.65□□□□□ -2.31
Col3a1P08121 Gm29344-201ENSMUST00000068143 210 ntBASIC0.65□□□□□ -2.31
Col3a1P08121 Gm22717-201ENSMUST00000122703 171 ntBASIC0.64□□□□□ -2.31
Col3a1P08121 Gm24321-201ENSMUST00000175348 80 ntBASIC0.64□□□□□ -2.31
Col3a1P08121 Gm25248-201ENSMUST00000175473 98 ntBASIC0.64□□□□□ -2.31
Col3a1P08121 Gm27974-201ENSMUST00000183415 105 ntBASIC0.64□□□□□ -2.31
Col3a1P08121 Gm24612-201ENSMUST00000083267 107 ntBASIC0.64□□□□□ -2.31
Col3a1P08121 Gm23590-201ENSMUST00000157661 104 ntBASIC0.63□□□□□ -2.31
Col3a1P08121 Gm25010-201ENSMUST00000158403 65 ntBASIC0.63□□□□□ -2.31
Col3a1P08121 Gm25307-201ENSMUST00000158885 106 ntBASIC0.63□□□□□ -2.31
Col3a1P08121 Mir7077-201ENSMUST00000183991 57 ntBASIC0.63□□□□□ -2.31
Col3a1P08121 Gm44301-201ENSMUST00000200362 143 ntBASIC0.63□□□□□ -2.31
Col3a1P08121 Snord32a-201ENSMUST00000083285 83 ntBASIC0.63□□□□□ -2.31
Col3a1P08121 Snord35a-201ENSMUST00000083884 90 ntBASIC0.63□□□□□ -2.31
Col3a1P08121 Gm25524-201ENSMUST00000101821 107 ntBASIC0.62□□□□□ -2.31
Col3a1P08121 Gm26491-201ENSMUST00000179268 121 ntBASIC0.62□□□□□ -2.31
Col3a1P08121 Gm27943-201ENSMUST00000184844 116 ntBASIC0.62□□□□□ -2.31
Col3a1P08121 Gm44327-201ENSMUST00000200068 117 ntBASIC0.62□□□□□ -2.31
Col3a1P08121 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.62□□□□□ -2.31
Col3a1P08121 Mir33-201ENSMUST00000083531 69 ntBASIC0.62□□□□□ -2.31
Col3a1P08121 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.62□□□□□ -2.31
Col3a1P08121 Gm22595-201ENSMUST00000104250 130 ntBASIC0.61□□□□□ -2.31
Col3a1P08121 Gm25309-201ENSMUST00000116728 126 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms