Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Trim56Q80VI1 Mir1904-201ENSMUST00000122702 80 ntBASIC1.16□□□□□ -2.22
Trim56Q80VI1 Mir7091-201ENSMUST00000184075 79 ntBASIC1.16□□□□□ -2.22
Trim56Q80VI1 DQ267101-201ENSMUST00000082562 73 ntBASIC1.16□□□□□ -2.22
Trim56Q80VI1 Gm22469-201ENSMUST00000104118 133 ntBASIC1.15□□□□□ -2.23
Trim56Q80VI1 Gm27943-201ENSMUST00000184844 116 ntBASIC1.15□□□□□ -2.23
Trim56Q80VI1 Snord32a-201ENSMUST00000083285 83 ntBASIC1.15□□□□□ -2.23
Trim56Q80VI1 Gm22413-201ENSMUST00000175465 85 ntBASIC1.14□□□□□ -2.23
Trim56Q80VI1 Gm23376-201ENSMUST00000082938 160 ntBASIC1.14□□□□□ -2.23
Trim56Q80VI1 Gm23203-201ENSMUST00000104374 107 ntBASIC1.13□□□□□ -2.23
Trim56Q80VI1 Mir1197-201ENSMUST00000117037 120 ntBASIC1.13□□□□□ -2.23
Trim56Q80VI1 Gm22067-201ENSMUST00000122790 107 ntBASIC1.13□□□□□ -2.23
Trim56Q80VI1 Gm27974-201ENSMUST00000183415 105 ntBASIC1.13□□□□□ -2.23
Trim56Q80VI1 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.13□□□□□ -2.23
Trim56Q80VI1 Snord95-201ENSMUST00000082846 68 ntBASIC1.13□□□□□ -2.23
Trim56Q80VI1 Gm24134-201ENSMUST00000083361 71 ntBASIC1.12□□□□□ -2.23
Trim56Q80VI1 Gm24580-201ENSMUST00000103965 131 ntBASIC1.11□□□□□ -2.23
Trim56Q80VI1 Gm24777-201ENSMUST00000157644 107 ntBASIC1.11□□□□□ -2.23
Trim56Q80VI1 Mir126a-201ENSMUST00000083606 73 ntBASIC1.11□□□□□ -2.23
Trim56Q80VI1 Gm25506-201ENSMUST00000104339 70 ntBASIC1.1□□□□□ -2.23
Trim56Q80VI1 Gm25656-201ENSMUST00000158466 66 ntBASIC1.1□□□□□ -2.23
Trim56Q80VI1 Gm24321-201ENSMUST00000175348 80 ntBASIC1.1□□□□□ -2.23
Trim56Q80VI1 Mir6380-201ENSMUST00000184334 81 ntBASIC1.1□□□□□ -2.23
Trim56Q80VI1 Mir10b-201ENSMUST00000083566 68 ntBASIC1.1□□□□□ -2.23
Trim56Q80VI1 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.09□□□□□ -2.23
Trim56Q80VI1 Snord35a-201ENSMUST00000083884 90 ntBASIC1.09□□□□□ -2.23
Trim56Q80VI1 Gm25756-201ENSMUST00000103990 136 ntBASIC1.08□□□□□ -2.24
Trim56Q80VI1 Gm24678-201ENSMUST00000158756 104 ntBASIC1.08□□□□□ -2.24
Trim56Q80VI1 Gm25328-201ENSMUST00000175013 107 ntBASIC1.08□□□□□ -2.24
Trim56Q80VI1 Gm42677-201ENSMUST00000196363 127 ntBASIC1.08□□□□□ -2.24
Trim56Q80VI1 Mir27b-201ENSMUST00000083541 73 ntBASIC1.08□□□□□ -2.24
Trim56Q80VI1 Mir669h-201ENSMUST00000116944 125 ntBASIC1.07□□□□□ -2.24
Trim56Q80VI1 Gm23306-201ENSMUST00000179058 105 ntBASIC1.07□□□□□ -2.24
Trim56Q80VI1 Gm27980-201ENSMUST00000184094 169 ntBASIC1.07□□□□□ -2.24
Trim56Q80VI1 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.07□□□□□ -2.24
Trim56Q80VI1 Mir200a-201ENSMUST00000083466 90 ntBASIC1.07□□□□□ -2.24
Trim56Q80VI1 Gm24288-201ENSMUST00000157630 144 ntBASIC1.06□□□□□ -2.24
Trim56Q80VI1 Gm22095-201ENSMUST00000158984 150 ntBASIC1.06□□□□□ -2.24
Trim56Q80VI1 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.06□□□□□ -2.24
Trim56Q80VI1 Gm27587-201ENSMUST00000185116 163 ntBASIC1.06□□□□□ -2.24
Trim56Q80VI1 Gm29432-201ENSMUST00000185397 139 ntBASIC1.06□□□□□ -2.24
Trim56Q80VI1 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Trim56Q80VI1 Gm23237-201ENSMUST00000104639 92 ntBASIC1.05□□□□□ -2.24
Trim56Q80VI1 Gm25787-201ENSMUST00000104709 92 ntBASIC1.05□□□□□ -2.24
Trim56Q80VI1 Gm23761-201ENSMUST00000158347 104 ntBASIC1.05□□□□□ -2.24
Trim56Q80VI1 Mir3473d-201ENSMUST00000175346 81 ntBASIC1.05□□□□□ -2.24
Trim56Q80VI1 Gm26438-201ENSMUST00000082593 107 ntBASIC1.05□□□□□ -2.24
Trim56Q80VI1 Mir695-201ENSMUST00000102261 109 ntBASIC1.04□□□□□ -2.24
Trim56Q80VI1 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Trim56Q80VI1 Mir3108-201ENSMUST00000175500 79 ntBASIC1.04□□□□□ -2.24
Trim56Q80VI1 Gm20305-201ENSMUST00000193226 177 ntBASIC1.04□□□□□ -2.24
Trim56Q80VI1 Gm45655-201ENSMUST00000211625 160 ntBASIC1.04□□□□□ -2.24
Trim56Q80VI1 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.04□□□□□ -2.24
Trim56Q80VI1 Gm25894-201ENSMUST00000083458 75 ntBASIC1.04□□□□□ -2.24
Trim56Q80VI1 Mir741-201ENSMUST00000103931 71 ntBASIC1.03□□□□□ -2.24
Trim56Q80VI1 Gm23893-201ENSMUST00000158106 134 ntBASIC1.03□□□□□ -2.24
Trim56Q80VI1 Gm24020-201ENSMUST00000180156 108 ntBASIC1.03□□□□□ -2.24
Trim56Q80VI1 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trim56Q80VI1 Gm24431-201ENSMUST00000104073 66 ntBASIC1.02□□□□□ -2.25
Trim56Q80VI1 Gm27549-201ENSMUST00000183508 62 ntBASIC1.02□□□□□ -2.25
Trim56Q80VI1 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.02□□□□□ -2.25
Trim56Q80VI1 Gm25683-201ENSMUST00000083940 131 ntBASIC1.02□□□□□ -2.25
Trim56Q80VI1 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.01□□□□□ -2.25
Trim56Q80VI1 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Trim56Q80VI1 Gm14533-201ENSMUST00000117088 93 ntBASIC1□□□□□ -2.25
Trim56Q80VI1 Gm23477-201ENSMUST00000158882 128 ntBASIC1□□□□□ -2.25
Trim56Q80VI1 Mirlet7g-201ENSMUST00000083506 88 ntBASIC1□□□□□ -2.25
Trim56Q80VI1 Mir876-201ENSMUST00000104659 81 ntBASIC0.99□□□□□ -2.25
Trim56Q80VI1 Gm25161-201ENSMUST00000158913 132 ntBASIC0.99□□□□□ -2.25
Trim56Q80VI1 Gm23726-201ENSMUST00000178937 67 ntBASIC0.99□□□□□ -2.25
Trim56Q80VI1 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Trim56Q80VI1 Gm25055-201ENSMUST00000157369 76 ntBASIC0.98□□□□□ -2.25
Trim56Q80VI1 Mir6364-201ENSMUST00000183396 86 ntBASIC0.98□□□□□ -2.25
Trim56Q80VI1 Gm38274-201ENSMUST00000195689 148 ntBASIC0.98□□□□□ -2.25
Trim56Q80VI1 Gm24918-201ENSMUST00000083022 130 ntBASIC0.98□□□□□ -2.25
Trim56Q80VI1 Mir362-201ENSMUST00000093592 65 ntBASIC0.98□□□□□ -2.25
Trim56Q80VI1 Gm25378-201ENSMUST00000104333 129 ntBASIC0.97□□□□□ -2.25
Trim56Q80VI1 Gm44327-201ENSMUST00000200068 117 ntBASIC0.97□□□□□ -2.25
Trim56Q80VI1 Gm22303-201ENSMUST00000082686 122 ntBASIC0.97□□□□□ -2.25
Trim56Q80VI1 Gm26338-201ENSMUST00000102372 110 ntBASIC0.96□□□□□ -2.26
Trim56Q80VI1 Gm24579-201ENSMUST00000103964 144 ntBASIC0.96□□□□□ -2.26
Trim56Q80VI1 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Trim56Q80VI1 Gm24378-201ENSMUST00000122699 106 ntBASIC0.96□□□□□ -2.26
Trim56Q80VI1 Gm23783-201ENSMUST00000157941 102 ntBASIC0.96□□□□□ -2.26
Trim56Q80VI1 Gm26485-201ENSMUST00000158019 64 ntBASIC0.96□□□□□ -2.26
Trim56Q80VI1 Mir3064-201ENSMUST00000175532 67 ntBASIC0.96□□□□□ -2.26
Trim56Q80VI1 Mir7079-201ENSMUST00000184697 69 ntBASIC0.96□□□□□ -2.26
Trim56Q80VI1 Gm44455-201ENSMUST00000200061 82 ntBASIC0.95□□□□□ -2.26
Trim56Q80VI1 Gm23008-201ENSMUST00000158946 80 ntBASIC0.94□□□□□ -2.26
Trim56Q80VI1 Gm24278-201ENSMUST00000104239 127 ntBASIC0.93□□□□□ -2.26
Trim56Q80VI1 Gm23826-201ENSMUST00000157394 119 ntBASIC0.93□□□□□ -2.26
Trim56Q80VI1 Gm27554-201ENSMUST00000185074 98 ntBASIC0.93□□□□□ -2.26
Trim56Q80VI1 Gm25847-201ENSMUST00000116793 96 ntBASIC0.92□□□□□ -2.26
Trim56Q80VI1 Gm25307-201ENSMUST00000158885 106 ntBASIC0.92□□□□□ -2.26
Trim56Q80VI1 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Trim56Q80VI1 Gm27937-201ENSMUST00000183605 88 ntBASIC0.92□□□□□ -2.26
Trim56Q80VI1 Gm44301-201ENSMUST00000200362 143 ntBASIC0.92□□□□□ -2.26
Trim56Q80VI1 Snord33-201ENSMUST00000083694 84 ntBASIC0.92□□□□□ -2.26
Trim56Q80VI1 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Trim56Q80VI1 Gm11966-201ENSMUST00000119907 87 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 243 ms