Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm24983-201ENSMUST00000104457 69 ntBASIC0.87□□□□□ -2.27
Ddb1Q3U1J4 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.87□□□□□ -2.27
Ddb1Q3U1J4 Gm38113-201ENSMUST00000193704 201 ntBASIC0.87□□□□□ -2.27
Ddb1Q3U1J4 Gm25894-201ENSMUST00000083458 75 ntBASIC0.87□□□□□ -2.27
Ddb1Q3U1J4 Snord33-201ENSMUST00000083694 84 ntBASIC0.87□□□□□ -2.27
Ddb1Q3U1J4 Gm22689-201ENSMUST00000102452 110 ntBASIC0.86□□□□□ -2.27
Ddb1Q3U1J4 Gm25542-201ENSMUST00000116889 94 ntBASIC0.86□□□□□ -2.27
Ddb1Q3U1J4 Gm25964-201ENSMUST00000157171 97 ntBASIC0.86□□□□□ -2.27
Ddb1Q3U1J4 Snord2-201ENSMUST00000157899 69 ntBASIC0.86□□□□□ -2.27
Ddb1Q3U1J4 Gm22406-201ENSMUST00000174923 93 ntBASIC0.86□□□□□ -2.27
Ddb1Q3U1J4 Gm25328-201ENSMUST00000175013 107 ntBASIC0.86□□□□□ -2.27
Ddb1Q3U1J4 Gm24202-201ENSMUST00000082948 103 ntBASIC0.86□□□□□ -2.27
Ddb1Q3U1J4 Gm25644-201ENSMUST00000083209 107 ntBASIC0.86□□□□□ -2.27
Ddb1Q3U1J4 Gm13065-201ENSMUST00000119178 141 ntBASIC0.85□□□□□ -2.27
Ddb1Q3U1J4 Gm25622-201ENSMUST00000157217 104 ntBASIC0.85□□□□□ -2.27
Ddb1Q3U1J4 Snora26-201ENSMUST00000175614 121 ntBASIC0.85□□□□□ -2.27
Ddb1Q3U1J4 Gm29047-201ENSMUST00000189816 108 ntBASIC0.85□□□□□ -2.27
Ddb1Q3U1J4 Gm26207-201ENSMUST00000082909 104 ntBASIC0.85□□□□□ -2.27
Ddb1Q3U1J4 Gm25756-201ENSMUST00000103990 136 ntBASIC0.84□□□□□ -2.27
Ddb1Q3U1J4 Gm25378-201ENSMUST00000104333 129 ntBASIC0.84□□□□□ -2.27
Ddb1Q3U1J4 Gm23203-201ENSMUST00000104374 107 ntBASIC0.84□□□□□ -2.27
Ddb1Q3U1J4 Gm25497-201ENSMUST00000104425 132 ntBASIC0.83□□□□□ -2.28
Ddb1Q3U1J4 Gm24064-201ENSMUST00000157486 106 ntBASIC0.83□□□□□ -2.28
Ddb1Q3U1J4 Gm25740-201ENSMUST00000180247 107 ntBASIC0.83□□□□□ -2.28
Ddb1Q3U1J4 Gm27289-201ENSMUST00000183341 82 ntBASIC0.83□□□□□ -2.28
Ddb1Q3U1J4 Gm23012-201ENSMUST00000104149 83 ntBASIC0.82□□□□□ -2.28
Ddb1Q3U1J4 Gm24321-201ENSMUST00000175348 80 ntBASIC0.82□□□□□ -2.28
Ddb1Q3U1J4 AC158537.2-201ENSMUST00000223575 150 ntBASIC0.82□□□□□ -2.28
Ddb1Q3U1J4 Gm25854-201ENSMUST00000082792 72 ntBASIC0.82□□□□□ -2.28
Ddb1Q3U1J4 Gm24203-201ENSMUST00000082949 114 ntBASIC0.82□□□□□ -2.28
Ddb1Q3U1J4 Gm24233-201ENSMUST00000104317 122 ntBASIC0.81□□□□□ -2.28
Ddb1Q3U1J4 Mir1197-201ENSMUST00000117037 120 ntBASIC0.81□□□□□ -2.28
Ddb1Q3U1J4 Gm25045-201ENSMUST00000122670 99 ntBASIC0.81□□□□□ -2.28
Ddb1Q3U1J4 Gm24868-201ENSMUST00000157265 136 ntBASIC0.81□□□□□ -2.28
Ddb1Q3U1J4 Gm24077-201ENSMUST00000158183 136 ntBASIC0.81□□□□□ -2.28
Ddb1Q3U1J4 Gm23180-201ENSMUST00000158686 125 ntBASIC0.81□□□□□ -2.28
Ddb1Q3U1J4 Gm44455-201ENSMUST00000200061 82 ntBASIC0.81□□□□□ -2.28
Ddb1Q3U1J4 Mir669f-201ENSMUST00000103850 121 ntBASIC0.8□□□□□ -2.28
Ddb1Q3U1J4 Gm27717-201ENSMUST00000183933 151 ntBASIC0.8□□□□□ -2.28
Ddb1Q3U1J4 Gm22652-201ENSMUST00000083207 131 ntBASIC0.8□□□□□ -2.28
Ddb1Q3U1J4 Gm24988-201ENSMUST00000104460 121 ntBASIC0.79□□□□□ -2.28
Ddb1Q3U1J4 Gm24199-201ENSMUST00000157808 136 ntBASIC0.78□□□□□ -2.28
Ddb1Q3U1J4 Gm24467-201ENSMUST00000157887 126 ntBASIC0.78□□□□□ -2.28
Ddb1Q3U1J4 AC122335.1-201ENSMUST00000217587 175 ntBASIC0.78□□□□□ -2.28
Ddb1Q3U1J4 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.78□□□□□ -2.28
Ddb1Q3U1J4 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.78□□□□□ -2.28
Ddb1Q3U1J4 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.78□□□□□ -2.28
Ddb1Q3U1J4 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Ddb1Q3U1J4 Gm25417-201ENSMUST00000104212 131 ntBASIC0.77□□□□□ -2.29
Ddb1Q3U1J4 Gm24593-201ENSMUST00000122507 106 ntBASIC0.77□□□□□ -2.29
Ddb1Q3U1J4 Gm26359-201ENSMUST00000158873 101 ntBASIC0.77□□□□□ -2.29
Ddb1Q3U1J4 Gm26236-201ENSMUST00000175536 137 ntBASIC0.77□□□□□ -2.29
Ddb1Q3U1J4 Gm23306-201ENSMUST00000179058 105 ntBASIC0.77□□□□□ -2.29
Ddb1Q3U1J4 Mir6389-201ENSMUST00000183661 102 ntBASIC0.77□□□□□ -2.29
Ddb1Q3U1J4 Gm42845-201ENSMUST00000197766 105 ntBASIC0.77□□□□□ -2.29
Ddb1Q3U1J4 Gm26438-201ENSMUST00000082593 107 ntBASIC0.77□□□□□ -2.29
Ddb1Q3U1J4 Gm22522-201ENSMUST00000158271 151 ntBASIC0.76□□□□□ -2.29
Ddb1Q3U1J4 Mir3108-201ENSMUST00000175500 79 ntBASIC0.76□□□□□ -2.29
Ddb1Q3U1J4 Gm27549-201ENSMUST00000183508 62 ntBASIC0.76□□□□□ -2.29
Ddb1Q3U1J4 Gm27943-201ENSMUST00000184844 116 ntBASIC0.76□□□□□ -2.29
Ddb1Q3U1J4 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Ddb1Q3U1J4 Gm25619-201ENSMUST00000122621 104 ntBASIC0.75□□□□□ -2.29
Ddb1Q3U1J4 Gm22943-201ENSMUST00000158564 76 ntBASIC0.75□□□□□ -2.29
Ddb1Q3U1J4 Gm27980-201ENSMUST00000184094 169 ntBASIC0.75□□□□□ -2.29
Ddb1Q3U1J4 Snord95-201ENSMUST00000082846 68 ntBASIC0.75□□□□□ -2.29
Ddb1Q3U1J4 Mir200a-201ENSMUST00000083466 90 ntBASIC0.75□□□□□ -2.29
Ddb1Q3U1J4 Mir216a-201ENSMUST00000083605 72 ntBASIC0.75□□□□□ -2.29
Ddb1Q3U1J4 Gm22983-201ENSMUST00000158308 104 ntBASIC0.74□□□□□ -2.29
Ddb1Q3U1J4 Gm25991-201ENSMUST00000102439 99 ntBASIC0.73□□□□□ -2.29
Ddb1Q3U1J4 Gm22100-201ENSMUST00000157926 63 ntBASIC0.73□□□□□ -2.29
Ddb1Q3U1J4 Gm23994-201ENSMUST00000158059 88 ntBASIC0.73□□□□□ -2.29
Ddb1Q3U1J4 Gm25160-201ENSMUST00000158914 102 ntBASIC0.73□□□□□ -2.29
Ddb1Q3U1J4 Gm22069-201ENSMUST00000179911 107 ntBASIC0.73□□□□□ -2.29
Ddb1Q3U1J4 Mir126a-201ENSMUST00000083606 73 ntBASIC0.73□□□□□ -2.29
Ddb1Q3U1J4 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Ddb1Q3U1J4 Gm24580-201ENSMUST00000103965 131 ntBASIC0.72□□□□□ -2.29
Ddb1Q3U1J4 Gm22088-201ENSMUST00000158341 117 ntBASIC0.72□□□□□ -2.29
Ddb1Q3U1J4 Gm27987-201ENSMUST00000184023 93 ntBASIC0.72□□□□□ -2.29
Ddb1Q3U1J4 Gm43038-201ENSMUST00000202359 88 ntBASIC0.72□□□□□ -2.29
Ddb1Q3U1J4 Mir741-201ENSMUST00000103931 71 ntBASIC0.71□□□□□ -2.3
Ddb1Q3U1J4 Gm22720-201ENSMUST00000122710 87 ntBASIC0.71□□□□□ -2.3
Ddb1Q3U1J4 Mir1950-201ENSMUST00000158526 74 ntBASIC0.71□□□□□ -2.3
Ddb1Q3U1J4 Gm26499-201ENSMUST00000178544 79 ntBASIC0.71□□□□□ -2.3
Ddb1Q3U1J4 Gm26096-201ENSMUST00000179084 79 ntBASIC0.71□□□□□ -2.3
Ddb1Q3U1J4 Gm29432-201ENSMUST00000185397 139 ntBASIC0.71□□□□□ -2.3
Ddb1Q3U1J4 Mir7229-201ENSMUST00000197062 53 ntBASIC0.71□□□□□ -2.3
Ddb1Q3U1J4 Gm23293-201ENSMUST00000082552 104 ntBASIC0.71□□□□□ -2.3
Ddb1Q3U1J4 Gm25055-201ENSMUST00000157369 76 ntBASIC0.7□□□□□ -2.3
Ddb1Q3U1J4 Gm25870-201ENSMUST00000179845 79 ntBASIC0.7□□□□□ -2.3
Ddb1Q3U1J4 Gm44327-201ENSMUST00000200068 117 ntBASIC0.7□□□□□ -2.3
Ddb1Q3U1J4 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.7□□□□□ -2.3
Ddb1Q3U1J4 Gm22071-201ENSMUST00000116857 83 ntBASIC0.69□□□□□ -2.3
Ddb1Q3U1J4 Gm23278-201ENSMUST00000157911 143 ntBASIC0.69□□□□□ -2.3
Ddb1Q3U1J4 Gm22413-201ENSMUST00000175465 85 ntBASIC0.69□□□□□ -2.3
Ddb1Q3U1J4 Gm24134-201ENSMUST00000083361 71 ntBASIC0.69□□□□□ -2.3
Ddb1Q3U1J4 Gm11333-201ENSMUST00000119479 148 ntBASIC0.68□□□□□ -2.3
Ddb1Q3U1J4 Mir669h-201ENSMUST00000116944 125 ntBASIC0.67□□□□□ -2.3
Ddb1Q3U1J4 Gm23672-201ENSMUST00000157471 107 ntBASIC0.67□□□□□ -2.3
Ddb1Q3U1J4 Gm27415-201ENSMUST00000183720 95 ntBASIC0.67□□□□□ -2.3
Ddb1Q3U1J4 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 168.4 ms