Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm24717-201ENSMUST00000157522 124 ntBASIC-1.6□□□□□ -2.67
Cdx2P43241 Mir6237-201ENSMUST00000183808 91 ntBASIC-1.6□□□□□ -2.67
Cdx2P43241 Gm26124-201ENSMUST00000083359 108 ntBASIC-1.6□□□□□ -2.67
Cdx2P43241 Gm21940-201ENSMUST00000204940 2278 ntBASIC-1.61□□□□□ -2.67
Cdx2P43241 Gm24070-201ENSMUST00000104519 130 ntBASIC-1.61□□□□□ -2.67
Cdx2P43241 Gm25493-201ENSMUST00000157375 103 ntBASIC-1.61□□□□□ -2.67
Cdx2P43241 Gm24054-201ENSMUST00000158619 105 ntBASIC-1.61□□□□□ -2.67
Cdx2P43241 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC-1.61□□□□□ -2.67
Cdx2P43241 Mir669j-201ENSMUST00000179023 121 ntBASIC-1.61□□□□□ -2.67
Cdx2P43241 Gm37545-201ENSMUST00000186512 148 ntBASIC-1.61□□□□□ -2.67
Cdx2P43241 Gm26454-201ENSMUST00000082682 107 ntBASIC-1.61□□□□□ -2.67
Cdx2P43241 Gm27798-201ENSMUST00000184989 71 ntBASIC-1.62□□□□□ -2.67
Cdx2P43241 Gm22139-201ENSMUST00000158747 105 ntBASIC-1.63□□□□□ -2.67
Cdx2P43241 Gm27851-201ENSMUST00000183529 63 ntBASIC-1.63□□□□□ -2.67
Cdx2P43241 Gm27937-201ENSMUST00000183605 88 ntBASIC-1.63□□□□□ -2.67
Cdx2P43241 Gm14838-201ENSMUST00000118913 248 ntBASIC-1.64□□□□□ -2.67
Cdx2P43241 Gm25889-201ENSMUST00000157775 107 ntBASIC-1.64□□□□□ -2.67
Cdx2P43241 Snord90-201ENSMUST00000104568 111 ntBASIC-1.65□□□□□ -2.67
Cdx2P43241 Gm22373-201ENSMUST00000104584 89 ntBASIC-1.65□□□□□ -2.67
Cdx2P43241 Gm43324-201ENSMUST00000197482 289 ntBASIC-1.65□□□□□ -2.67
Cdx2P43241 Gm22805-201ENSMUST00000082739 107 ntBASIC-1.66□□□□□ -2.68
Cdx2P43241 Gm23173-201ENSMUST00000157161 160 ntBASIC-1.67□□□□□ -2.68
Cdx2P43241 Gm27415-201ENSMUST00000183720 95 ntBASIC-1.67□□□□□ -2.68
Cdx2P43241 Gm23240-201ENSMUST00000083009 121 ntBASIC-1.67□□□□□ -2.68
Cdx2P43241 Mir494-201ENSMUST00000093632 85 ntBASIC-1.67□□□□□ -2.68
Cdx2P43241 Snord78-201ENSMUST00000104032 66 ntBASIC-1.68□□□□□ -2.68
Cdx2P43241 Gm23335-201ENSMUST00000117021 90 ntBASIC-1.68□□□□□ -2.68
Cdx2P43241 Gm22606-201ENSMUST00000158290 103 ntBASIC-1.68□□□□□ -2.68
Cdx2P43241 Gm23337-201ENSMUST00000158959 118 ntBASIC-1.68□□□□□ -2.68
Cdx2P43241 Gm26097-201ENSMUST00000179642 93 ntBASIC-1.68□□□□□ -2.68
Cdx2P43241 Gm23003-201ENSMUST00000179948 107 ntBASIC-1.68□□□□□ -2.68
Cdx2P43241 mt-Tr-201ENSMUST00000082412 68 ntBASIC-1.68□□□□□ -2.68
Cdx2P43241 Gm23507-201ENSMUST00000083078 107 ntBASIC-1.68□□□□□ -2.68
Cdx2P43241 Gm26125-201ENSMUST00000083357 107 ntBASIC-1.68□□□□□ -2.68
Cdx2P43241 Gm22196-201ENSMUST00000116865 109 ntBASIC-1.69□□□□□ -2.68
Cdx2P43241 Gm24775-201ENSMUST00000157377 99 ntBASIC-1.69□□□□□ -2.68
Cdx2P43241 Gm25887-201ENSMUST00000157777 84 ntBASIC-1.69□□□□□ -2.68
Cdx2P43241 Gm26498-201ENSMUST00000177799 79 ntBASIC-1.69□□□□□ -2.68
Cdx2P43241 Gm26230-201ENSMUST00000180141 79 ntBASIC-1.69□□□□□ -2.68
Cdx2P43241 Gm43977-201ENSMUST00000203970 189 ntBASIC-1.69□□□□□ -2.68
Cdx2P43241 Gm45002-201ENSMUST00000208045 120 ntBASIC-1.69□□□□□ -2.68
Cdx2P43241 Mir1969-201ENSMUST00000157623 94 ntBASIC-1.7□□□□□ -2.68
Cdx2P43241 AC122327.1-201ENSMUST00000220778 108 ntBASIC-1.7□□□□□ -2.68
Cdx2P43241 Gm24201-201ENSMUST00000082946 125 ntBASIC-1.7□□□□□ -2.68
Cdx2P43241 Gm25440-201ENSMUST00000158279 154 ntBASIC-1.71□□□□□ -2.68
Cdx2P43241 Gm17522-202ENSMUST00000186631 174 ntTSL 1 (best) BASIC-1.71□□□□□ -2.68
Cdx2P43241 Gm17412-202ENSMUST00000189566 174 ntTSL 1 (best) BASIC-1.71□□□□□ -2.68
Cdx2P43241 Mir7218-201ENSMUST00000200050 59 ntBASIC-1.71□□□□□ -2.68
Cdx2P43241 Gm24225-201ENSMUST00000158825 98 ntBASIC-1.72□□□□□ -2.68
Cdx2P43241 Gm25229-201ENSMUST00000178587 79 ntBASIC-1.72□□□□□ -2.68
Cdx2P43241 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC-1.72□□□□□ -2.68
Cdx2P43241 Mir122-201ENSMUST00000083468 66 ntBASIC-1.72□□□□□ -2.68
Cdx2P43241 Gm25619-201ENSMUST00000122621 104 ntBASIC-1.73□□□□□ -2.69
Cdx2P43241 Gm26204-201ENSMUST00000082906 107 ntBASIC-1.73□□□□□ -2.69
Cdx2P43241 Gm24134-201ENSMUST00000083361 71 ntBASIC-1.73□□□□□ -2.69
Cdx2P43241 Traj33-201ENSMUST00000103708 57 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
Cdx2P43241 Gm22699-201ENSMUST00000175376 105 ntBASIC-1.74□□□□□ -2.69
Cdx2P43241 Gm25158-201ENSMUST00000177681 121 ntBASIC-1.74□□□□□ -2.69
Cdx2P43241 Gm26229-201ENSMUST00000179699 121 ntBASIC-1.74□□□□□ -2.69
Cdx2P43241 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC-1.74□□□□□ -2.69
Cdx2P43241 Gm22828-201ENSMUST00000083768 107 ntBASIC-1.74□□□□□ -2.69
Cdx2P43241 Gm24384-201ENSMUST00000122693 75 ntBASIC-1.75□□□□□ -2.69
Cdx2P43241 Gm24947-201ENSMUST00000158334 110 ntBASIC-1.75□□□□□ -2.69
Cdx2P43241 Gm23477-201ENSMUST00000158882 128 ntBASIC-1.75□□□□□ -2.69
Cdx2P43241 Gm23421-201ENSMUST00000158934 104 ntBASIC-1.75□□□□□ -2.69
Cdx2P43241 Gm27465-201ENSMUST00000184290 91 ntBASIC-1.76□□□□□ -2.69
Cdx2P43241 Gm22989-201ENSMUST00000158313 86 ntBASIC-1.77□□□□□ -2.69
Cdx2P43241 Gm22464-201ENSMUST00000175273 64 ntBASIC-1.77□□□□□ -2.69
Cdx2P43241 Mir5619-201ENSMUST00000176065 61 ntBASIC-1.77□□□□□ -2.69
Cdx2P43241 Gm37845-201ENSMUST00000194977 355 ntBASIC-1.77□□□□□ -2.69
Cdx2P43241 AC109214.2-201ENSMUST00000220089 358 ntBASIC-1.77□□□□□ -2.69
Cdx2P43241 Gm22385-201ENSMUST00000158189 101 ntBASIC-1.78□□□□□ -2.69
Cdx2P43241 Mir741-201ENSMUST00000103931 71 ntBASIC-1.79□□□□□ -2.7
Cdx2P43241 Gm22197-201ENSMUST00000116866 58 ntBASIC-1.79□□□□□ -2.7
Cdx2P43241 Gm25915-201ENSMUST00000104265 126 ntBASIC-1.8□□□□□ -2.7
Cdx2P43241 Gm24842-201ENSMUST00000158681 54 ntBASIC-1.8□□□□□ -2.7
Cdx2P43241 Gm22140-201ENSMUST00000158745 120 ntBASIC-1.8□□□□□ -2.7
Cdx2P43241 Gm26426-201ENSMUST00000177866 123 ntBASIC-1.8□□□□□ -2.7
Cdx2P43241 Gm26060-201ENSMUST00000180094 123 ntBASIC-1.8□□□□□ -2.7
Cdx2P43241 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
Cdx2P43241 Snord72-201ENSMUST00000104549 81 ntBASIC-1.83□□□□□ -2.7
Cdx2P43241 Gm13339-201ENSMUST00000120651 510 ntBASIC-1.83□□□□□ -2.7
Cdx2P43241 Gm25862-201ENSMUST00000158250 129 ntBASIC-1.83□□□□□ -2.7
Cdx2P43241 Gm24131-201ENSMUST00000158539 107 ntBASIC-1.83□□□□□ -2.7
Cdx2P43241 Gm22709-201ENSMUST00000116893 111 ntBASIC-1.84□□□□□ -2.7
Cdx2P43241 Gm25623-201ENSMUST00000157216 108 ntBASIC-1.84□□□□□ -2.7
Cdx2P43241 AC122210.2-201ENSMUST00000220216 115 ntBASIC-1.84□□□□□ -2.7
Cdx2P43241 Mir466b-1-201ENSMUST00000177988 82 ntBASIC-1.85□□□□□ -2.71
Cdx2P43241 Mir669b-201ENSMUST00000102172 97 ntBASIC-1.86□□□□□ -2.71
Cdx2P43241 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-1.87□□□□□ -2.71
Cdx2P43241 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-1.87□□□□□ -2.71
Cdx2P43241 Gm24988-201ENSMUST00000104460 121 ntBASIC-1.87□□□□□ -2.71
Cdx2P43241 Gm25716-201ENSMUST00000158628 104 ntBASIC-1.87□□□□□ -2.71
Cdx2P43241 Gm37889-201ENSMUST00000194174 251 ntBASIC-1.87□□□□□ -2.71
Cdx2P43241 AC165138.1-201ENSMUST00000226984 270 ntBASIC-1.87□□□□□ -2.71
Cdx2P43241 Gm21961-201ENSMUST00000110100 114 ntAPPRIS P1 TSL 5 BASIC-1.88□□□□□ -2.71
Cdx2P43241 Gm24801-201ENSMUST00000178503 105 ntBASIC-1.88□□□□□ -2.71
Cdx2P43241 AC140930.2-201ENSMUST00000221803 109 ntBASIC-1.88□□□□□ -2.71
Cdx2P43241 Gm26109-201ENSMUST00000083970 70 ntBASIC-1.88□□□□□ -2.71
Cdx2P43241 Gm24400-201ENSMUST00000157865 107 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms