Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.29□□□□□ -2.2
Hoxd3P09027 Gm25832-201ENSMUST00000104140 130 ntBASIC1.28□□□□□ -2.2
Hoxd3P09027 Gm25309-201ENSMUST00000116728 126 ntBASIC1.28□□□□□ -2.2
Hoxd3P09027 Gm26338-201ENSMUST00000102372 110 ntBASIC1.27□□□□□ -2.21
Hoxd3P09027 Gm25715-201ENSMUST00000158627 125 ntBASIC1.27□□□□□ -2.21
Hoxd3P09027 Gm25138-201ENSMUST00000083248 136 ntBASIC1.27□□□□□ -2.21
Hoxd3P09027 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
Hoxd3P09027 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.26□□□□□ -2.21
Hoxd3P09027 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1.26□□□□□ -2.21
Hoxd3P09027 Gm22603-201ENSMUST00000157603 96 ntBASIC1.26□□□□□ -2.21
Hoxd3P09027 Gm22165-201ENSMUST00000158414 103 ntBASIC1.26□□□□□ -2.21
Hoxd3P09027 Gm22474-201ENSMUST00000179407 107 ntBASIC1.26□□□□□ -2.21
Hoxd3P09027 Gm25087-201ENSMUST00000101992 78 ntBASIC1.25□□□□□ -2.21
Hoxd3P09027 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Hoxd3P09027 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.25□□□□□ -2.21
Hoxd3P09027 Gm24996-201ENSMUST00000158390 99 ntBASIC1.25□□□□□ -2.21
Hoxd3P09027 Gm26467-201ENSMUST00000097257 78 ntBASIC1.25□□□□□ -2.21
Hoxd3P09027 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
Hoxd3P09027 Gm23590-201ENSMUST00000157661 104 ntBASIC1.24□□□□□ -2.21
Hoxd3P09027 Gm26181-201ENSMUST00000157687 106 ntBASIC1.24□□□□□ -2.21
Hoxd3P09027 Gm22386-201ENSMUST00000158192 129 ntBASIC1.24□□□□□ -2.21
Hoxd3P09027 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.24□□□□□ -2.21
Hoxd3P09027 Gm27980-201ENSMUST00000184094 169 ntBASIC1.24□□□□□ -2.21
Hoxd3P09027 Gm38274-201ENSMUST00000195689 148 ntBASIC1.24□□□□□ -2.21
Hoxd3P09027 Gm25894-201ENSMUST00000083458 75 ntBASIC1.24□□□□□ -2.21
Hoxd3P09027 Gm26491-201ENSMUST00000179268 121 ntBASIC1.23□□□□□ -2.21
Hoxd3P09027 Gm25820-201ENSMUST00000198589 127 ntBASIC1.23□□□□□ -2.21
Hoxd3P09027 Gm45125-201ENSMUST00000206908 151 ntBASIC1.23□□□□□ -2.21
Hoxd3P09027 Gm24723-201ENSMUST00000158233 132 ntBASIC1.22□□□□□ -2.21
Hoxd3P09027 Gm24321-201ENSMUST00000175348 80 ntBASIC1.22□□□□□ -2.21
Hoxd3P09027 Gm25993-201ENSMUST00000175391 80 ntBASIC1.22□□□□□ -2.21
Hoxd3P09027 Gm24797-201ENSMUST00000178103 107 ntBASIC1.22□□□□□ -2.21
Hoxd3P09027 Mir7010-201ENSMUST00000183464 63 ntBASIC1.22□□□□□ -2.21
Hoxd3P09027 Gm24259-201ENSMUST00000083740 107 ntBASIC1.22□□□□□ -2.21
Hoxd3P09027 Gm22965-201ENSMUST00000157958 101 ntBASIC1.21□□□□□ -2.22
Hoxd3P09027 Gm42533-201ENSMUST00000196247 157 ntBASIC1.21□□□□□ -2.22
Hoxd3P09027 AC129019.2-201ENSMUST00000222063 202 ntBASIC1.21□□□□□ -2.22
Hoxd3P09027 Mir320-201ENSMUST00000083594 82 ntBASIC1.21□□□□□ -2.22
Hoxd3P09027 Mir717-201ENSMUST00000102259 109 ntBASIC1.2□□□□□ -2.22
Hoxd3P09027 Gm23036-201ENSMUST00000157885 99 ntBASIC1.2□□□□□ -2.22
Hoxd3P09027 Gm24942-201ENSMUST00000158328 114 ntBASIC1.2□□□□□ -2.22
Hoxd3P09027 Gm25831-201ENSMUST00000158924 163 ntBASIC1.2□□□□□ -2.22
Hoxd3P09027 Gm27974-201ENSMUST00000183415 105 ntBASIC1.2□□□□□ -2.22
Hoxd3P09027 Mir6905-201ENSMUST00000184228 70 ntBASIC1.2□□□□□ -2.22
Hoxd3P09027 Gm28794-201ENSMUST00000185276 136 ntBASIC1.2□□□□□ -2.22
Hoxd3P09027 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Hoxd3P09027 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.19□□□□□ -2.22
Hoxd3P09027 Gm24902-201ENSMUST00000158126 123 ntBASIC1.19□□□□□ -2.22
Hoxd3P09027 Gm25307-201ENSMUST00000158885 106 ntBASIC1.19□□□□□ -2.22
Hoxd3P09027 Mir6351-201ENSMUST00000183826 99 ntBASIC1.19□□□□□ -2.22
Hoxd3P09027 Mir15a-201ENSMUST00000175266 84 ntBASIC1.18□□□□□ -2.22
Hoxd3P09027 Gm25802-201ENSMUST00000082639 77 ntBASIC1.18□□□□□ -2.22
Hoxd3P09027 Gm15115-201ENSMUST00000121145 264 ntBASIC1.17□□□□□ -2.22
Hoxd3P09027 Gm23558-201ENSMUST00000157823 80 ntBASIC1.17□□□□□ -2.22
Hoxd3P09027 Gm23267-201ENSMUST00000178490 132 ntBASIC1.17□□□□□ -2.22
Hoxd3P09027 Gm27248-201ENSMUST00000184004 166 ntBASIC1.17□□□□□ -2.22
Hoxd3P09027 Gm25296-201ENSMUST00000082566 67 ntBASIC1.17□□□□□ -2.22
Hoxd3P09027 Gm22298-201ENSMUST00000082662 133 ntBASIC1.17□□□□□ -2.22
Hoxd3P09027 Gm22016-201ENSMUST00000158793 114 ntBASIC1.16□□□□□ -2.22
Hoxd3P09027 Gm26007-201ENSMUST00000158798 120 ntBASIC1.16□□□□□ -2.22
Hoxd3P09027 Gm44327-201ENSMUST00000200068 117 ntBASIC1.16□□□□□ -2.22
Hoxd3P09027 Gm25495-201ENSMUST00000104431 131 ntBASIC1.15□□□□□ -2.23
Hoxd3P09027 Gm24174-201ENSMUST00000158933 111 ntBASIC1.15□□□□□ -2.23
Hoxd3P09027 Gm25128-201ENSMUST00000083339 76 ntBASIC1.15□□□□□ -2.23
Hoxd3P09027 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Hoxd3P09027 Snord13-201ENSMUST00000157627 104 ntBASIC1.13□□□□□ -2.23
Hoxd3P09027 Gm23122-201ENSMUST00000157645 103 ntBASIC1.13□□□□□ -2.23
Hoxd3P09027 Gm22542-201ENSMUST00000158166 95 ntBASIC1.13□□□□□ -2.23
Hoxd3P09027 Gm23714-201ENSMUST00000179259 105 ntBASIC1.13□□□□□ -2.23
Hoxd3P09027 Gm27263-201ENSMUST00000184760 76 ntBASIC1.13□□□□□ -2.23
Hoxd3P09027 Gm27587-201ENSMUST00000185116 163 ntBASIC1.13□□□□□ -2.23
Hoxd3P09027 Gm23961-201ENSMUST00000104685 97 ntBASIC1.12□□□□□ -2.23
Hoxd3P09027 Gm24895-201ENSMUST00000122742 74 ntBASIC1.12□□□□□ -2.23
Hoxd3P09027 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.12□□□□□ -2.23
Hoxd3P09027 Gm23967-201ENSMUST00000175062 78 ntBASIC1.12□□□□□ -2.23
Hoxd3P09027 Gm42845-201ENSMUST00000197766 105 ntBASIC1.12□□□□□ -2.23
Hoxd3P09027 Gm44455-201ENSMUST00000200061 82 ntBASIC1.12□□□□□ -2.23
Hoxd3P09027 AC125190.3-201ENSMUST00000223224 121 ntBASIC1.12□□□□□ -2.23
Hoxd3P09027 Gm24796-201ENSMUST00000104007 107 ntBASIC1.11□□□□□ -2.23
Hoxd3P09027 Gm22559-201ENSMUST00000157329 134 ntBASIC1.11□□□□□ -2.23
Hoxd3P09027 Gm22074-201ENSMUST00000158595 113 ntBASIC1.11□□□□□ -2.23
Hoxd3P09027 Gm24920-201ENSMUST00000083018 85 ntBASIC1.11□□□□□ -2.23
Hoxd3P09027 Gm23180-201ENSMUST00000158686 125 ntBASIC1.1□□□□□ -2.23
Hoxd3P09027 Gm24508-201ENSMUST00000180104 107 ntBASIC1.1□□□□□ -2.23
Hoxd3P09027 Gm27711-201ENSMUST00000183802 118 ntBASIC1.1□□□□□ -2.23
Hoxd3P09027 Gm27493-201ENSMUST00000184128 78 ntBASIC1.1□□□□□ -2.23
Hoxd3P09027 Gm44962-201ENSMUST00000206460 279 ntBASIC1.1□□□□□ -2.23
Hoxd3P09027 Gm23245-201ENSMUST00000083370 135 ntBASIC1.1□□□□□ -2.23
Hoxd3P09027 Gm25326-201ENSMUST00000101903 107 ntBASIC1.09□□□□□ -2.23
Hoxd3P09027 Gm27326-201ENSMUST00000183504 95 ntBASIC1.09□□□□□ -2.23
Hoxd3P09027 Gm26052-201ENSMUST00000104646 84 ntBASIC1.08□□□□□ -2.24
Hoxd3P09027 Gm27943-201ENSMUST00000184844 116 ntBASIC1.08□□□□□ -2.24
Hoxd3P09027 Gm44483-201ENSMUST00000197203 97 ntBASIC1.08□□□□□ -2.24
Hoxd3P09027 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
Hoxd3P09027 Gm22746-201ENSMUST00000082494 107 ntBASIC1.08□□□□□ -2.24
Hoxd3P09027 Mir23a-201ENSMUST00000083677 75 ntBASIC1.08□□□□□ -2.24
Hoxd3P09027 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
Hoxd3P09027 Gm24377-201ENSMUST00000104398 131 ntBASIC1.07□□□□□ -2.24
Hoxd3P09027 Gm23955-201ENSMUST00000157214 100 ntBASIC1.07□□□□□ -2.24
Hoxd3P09027 Gm23020-201ENSMUST00000158766 253 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 212.3 ms