Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mre11Q61216 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Mre11Q61216 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC20.32■□□□□ 0.84
Mre11Q61216 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mre11Q61216 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mre11Q61216 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mre11Q61216 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Mre11Q61216 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Mre11Q61216 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.31■□□□□ 0.84
Mre11Q61216 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Mre11Q61216 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Mre11Q61216 Reep4-203ENSMUST00000226563 1444 ntBASIC20.31■□□□□ 0.84
Mre11Q61216 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Gm43017-201ENSMUST00000198296 752 ntBASIC20.31■□□□□ 0.84
Mre11Q61216 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.31■□□□□ 0.84
Mre11Q61216 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Mre11Q61216 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Mre11Q61216 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.31■□□□□ 0.84
Mre11Q61216 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mre11Q61216 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC20.31■□□□□ 0.84
Mre11Q61216 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Mre11Q61216 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Mre11Q61216 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mre11Q61216 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Mre11Q61216 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Mre11Q61216 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.29■□□□□ 0.84
Mre11Q61216 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Mre11Q61216 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Mre11Q61216 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Mre11Q61216 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mre11Q61216 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Mre11Q61216 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Mre11Q61216 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Mre11Q61216 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Mre11Q61216 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mre11Q61216 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.27■□□□□ 0.84
Mre11Q61216 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mre11Q61216 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mre11Q61216 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mre11Q61216 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.27■□□□□ 0.84
Mre11Q61216 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mre11Q61216 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.27■□□□□ 0.84
Mre11Q61216 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mre11Q61216 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mre11Q61216 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mre11Q61216 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.27■□□□□ 0.84
Mre11Q61216 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mre11Q61216 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mre11Q61216 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms