Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Znf235Q61116 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.68■□□□□ 0.42
Znf235Q61116 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Znf235Q61116 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.68■□□□□ 0.42
Znf235Q61116 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf235Q61116 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Znf235Q61116 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Znf235Q61116 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf235Q61116 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf235Q61116 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Znf235Q61116 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf235Q61116 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Znf235Q61116 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf235Q61116 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Znf235Q61116 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf235Q61116 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Znf235Q61116 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf235Q61116 Gm27741-201ENSMUST00000185060 237 ntBASIC17.67■□□□□ 0.42
Znf235Q61116 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.67■□□□□ 0.42
Znf235Q61116 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.67■□□□□ 0.42
Znf235Q61116 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Znf235Q61116 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf235Q61116 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf235Q61116 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Znf235Q61116 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.66■□□□□ 0.42
Znf235Q61116 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Znf235Q61116 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Znf235Q61116 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.66■□□□□ 0.42
Znf235Q61116 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.66■□□□□ 0.42
Znf235Q61116 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.66■□□□□ 0.42
Znf235Q61116 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Znf235Q61116 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.66■□□□□ 0.42
Znf235Q61116 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Znf235Q61116 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.65■□□□□ 0.42
Znf235Q61116 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.65■□□□□ 0.42
Znf235Q61116 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf235Q61116 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf235Q61116 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Znf235Q61116 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf235Q61116 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Znf235Q61116 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf235Q61116 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf235Q61116 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf235Q61116 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Znf235Q61116 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Znf235Q61116 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Znf235Q61116 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Znf235Q61116 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf235Q61116 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Znf235Q61116 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Znf235Q61116 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Znf235Q61116 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.64■□□□□ 0.41
Znf235Q61116 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf235Q61116 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf235Q61116 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Znf235Q61116 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf235Q61116 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf235Q61116 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Znf235Q61116 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Znf235Q61116 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Znf235Q61116 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.63■□□□□ 0.41
Znf235Q61116 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.63■□□□□ 0.41
Znf235Q61116 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Znf235Q61116 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Znf235Q61116 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Znf235Q61116 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Znf235Q61116 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.62■□□□□ 0.41
Znf235Q61116 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.62■□□□□ 0.41
Znf235Q61116 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Znf235Q61116 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.62■□□□□ 0.41
Znf235Q61116 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Znf235Q61116 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Znf235Q61116 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms