Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43aQ3TL54 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43aQ3TL54 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43aQ3TL54 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43aQ3TL54 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43aQ3TL54 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim43aQ3TL54 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim43aQ3TL54 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trim43aQ3TL54 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim43aQ3TL54 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim43aQ3TL54 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.94■□□□□ 0.46
Trim43aQ3TL54 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trim43aQ3TL54 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.93■□□□□ 0.46
Trim43aQ3TL54 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Gm10653-202ENSMUST00000139570 835 ntBASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim43aQ3TL54 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trim43aQ3TL54 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms