Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn6Q03958 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Pfdn6Q03958 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Pfdn6Q03958 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pfdn6Q03958 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.97■□□□□ 0.31
Pfdn6Q03958 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.97■□□□□ 0.31
Pfdn6Q03958 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Pfdn6Q03958 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.96■□□□□ 0.31
Pfdn6Q03958 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Pfdn6Q03958 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pfdn6Q03958 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Pfdn6Q03958 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pfdn6Q03958 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Pfdn6Q03958 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.96■□□□□ 0.3
Pfdn6Q03958 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Pfdn6Q03958 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
Pfdn6Q03958 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.95■□□□□ 0.3
Pfdn6Q03958 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Gm12085-201ENSMUST00000119263 940 ntBASIC16.95■□□□□ 0.3
Pfdn6Q03958 Gm9731-201ENSMUST00000209480 747 ntBASIC16.95■□□□□ 0.3
Pfdn6Q03958 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn6Q03958 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.94■□□□□ 0.3
Pfdn6Q03958 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.94■□□□□ 0.3
Pfdn6Q03958 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Gm38027-201ENSMUST00000192315 235 ntBASIC16.94■□□□□ 0.3
Pfdn6Q03958 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.94■□□□□ 0.3
Pfdn6Q03958 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.94■□□□□ 0.3
Pfdn6Q03958 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Pfdn6Q03958 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.94■□□□□ 0.3
Pfdn6Q03958 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pfdn6Q03958 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn6Q03958 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms