Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm25423-201ENSMUST00000157609 107 ntBASIC1.66□□□□□ -2.14
Usp40Q8BWR4 Gm22406-201ENSMUST00000174923 93 ntBASIC1.66□□□□□ -2.14
Usp40Q8BWR4 Gm36956-201ENSMUST00000193830 214 ntBASIC1.66□□□□□ -2.14
Usp40Q8BWR4 Snord14a-201ENSMUST00000082807 87 ntBASIC1.66□□□□□ -2.14
Usp40Q8BWR4 Gm25328-201ENSMUST00000175013 107 ntBASIC1.65□□□□□ -2.15
Usp40Q8BWR4 Gm22801-201ENSMUST00000175624 84 ntBASIC1.65□□□□□ -2.15
Usp40Q8BWR4 Gm26139-201ENSMUST00000180098 107 ntBASIC1.65□□□□□ -2.15
Usp40Q8BWR4 Snora75-201ENSMUST00000082903 133 ntBASIC1.65□□□□□ -2.15
Usp40Q8BWR4 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.65□□□□□ -2.15
Usp40Q8BWR4 Gm22786-201ENSMUST00000104086 122 ntBASIC1.64□□□□□ -2.15
Usp40Q8BWR4 Gm26301-201ENSMUST00000104813 95 ntBASIC1.64□□□□□ -2.15
Usp40Q8BWR4 Gm22030-201ENSMUST00000116942 63 ntBASIC1.64□□□□□ -2.15
Usp40Q8BWR4 Gm23328-201ENSMUST00000157418 132 ntBASIC1.64□□□□□ -2.15
Usp40Q8BWR4 Gm22788-201ENSMUST00000157876 61 ntBASIC1.64□□□□□ -2.15
Usp40Q8BWR4 Gm25693-201ENSMUST00000175443 85 ntBASIC1.64□□□□□ -2.15
Usp40Q8BWR4 Mir15b-201ENSMUST00000083646 64 ntBASIC1.64□□□□□ -2.15
Usp40Q8BWR4 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Usp40Q8BWR4 Gm25759-201ENSMUST00000103988 129 ntBASIC1.63□□□□□ -2.15
Usp40Q8BWR4 Gm24290-201ENSMUST00000157634 96 ntBASIC1.63□□□□□ -2.15
Usp40Q8BWR4 Gm26089-201ENSMUST00000157898 107 ntBASIC1.63□□□□□ -2.15
Usp40Q8BWR4 Gm25936-201ENSMUST00000179952 114 ntBASIC1.63□□□□□ -2.15
Usp40Q8BWR4 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Usp40Q8BWR4 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.63□□□□□ -2.15
Usp40Q8BWR4 Mir487b-201ENSMUST00000102265 82 ntBASIC1.62□□□□□ -2.15
Usp40Q8BWR4 Gm24580-201ENSMUST00000103965 131 ntBASIC1.62□□□□□ -2.15
Usp40Q8BWR4 Gm24073-201ENSMUST00000158177 106 ntBASIC1.62□□□□□ -2.15
Usp40Q8BWR4 Gm24942-201ENSMUST00000158328 114 ntBASIC1.62□□□□□ -2.15
Usp40Q8BWR4 Gm24222-201ENSMUST00000158834 93 ntBASIC1.62□□□□□ -2.15
Usp40Q8BWR4 Mir3108-201ENSMUST00000175500 79 ntBASIC1.62□□□□□ -2.15
Usp40Q8BWR4 Gm27265-201ENSMUST00000183559 77 ntBASIC1.62□□□□□ -2.15
Usp40Q8BWR4 Mir7675-201ENSMUST00000184262 58 ntBASIC1.62□□□□□ -2.15
Usp40Q8BWR4 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Usp40Q8BWR4 Gm25768-201ENSMUST00000158570 98 ntBASIC1.61□□□□□ -2.15
Usp40Q8BWR4 Gm25715-201ENSMUST00000158627 125 ntBASIC1.61□□□□□ -2.15
Usp40Q8BWR4 Gm25274-201ENSMUST00000104296 135 ntBASIC1.6□□□□□ -2.15
Usp40Q8BWR4 Gm22673-201ENSMUST00000104415 131 ntBASIC1.6□□□□□ -2.15
Usp40Q8BWR4 Gm22087-201ENSMUST00000158339 88 ntBASIC1.6□□□□□ -2.15
Usp40Q8BWR4 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.6□□□□□ -2.15
Usp40Q8BWR4 Gm25186-201ENSMUST00000083909 108 ntBASIC1.6□□□□□ -2.15
Usp40Q8BWR4 Snord1a-201ENSMUST00000083160 74 ntBASIC1.59□□□□□ -2.15
Usp40Q8BWR4 Gm24865-201ENSMUST00000103246 96 ntBASIC1.58□□□□□ -2.16
Usp40Q8BWR4 Mir1961-201ENSMUST00000158643 112 ntBASIC1.58□□□□□ -2.16
Usp40Q8BWR4 Gm22929-201ENSMUST00000175517 107 ntBASIC1.58□□□□□ -2.16
Usp40Q8BWR4 Mir7663-201ENSMUST00000183950 61 ntBASIC1.58□□□□□ -2.16
Usp40Q8BWR4 Gm24262-201ENSMUST00000157431 144 ntBASIC1.57□□□□□ -2.16
Usp40Q8BWR4 Gm25663-201ENSMUST00000157698 135 ntBASIC1.57□□□□□ -2.16
Usp40Q8BWR4 Gm22485-201ENSMUST00000157990 109 ntBASIC1.57□□□□□ -2.16
Usp40Q8BWR4 Gm27993-201ENSMUST00000184362 85 ntBASIC1.57□□□□□ -2.16
Usp40Q8BWR4 Gm44396-201ENSMUST00000199843 114 ntBASIC1.57□□□□□ -2.16
Usp40Q8BWR4 Gm24612-201ENSMUST00000083267 107 ntBASIC1.57□□□□□ -2.16
Usp40Q8BWR4 Gm23419-201ENSMUST00000175523 84 ntBASIC1.56□□□□□ -2.16
Usp40Q8BWR4 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
Usp40Q8BWR4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Usp40Q8BWR4 Gm23991-201ENSMUST00000117033 93 ntBASIC1.55□□□□□ -2.16
Usp40Q8BWR4 Snord2-201ENSMUST00000157899 69 ntBASIC1.55□□□□□ -2.16
Usp40Q8BWR4 Mir1954-201ENSMUST00000175595 86 ntBASIC1.55□□□□□ -2.16
Usp40Q8BWR4 Gm27554-201ENSMUST00000185074 98 ntBASIC1.55□□□□□ -2.16
Usp40Q8BWR4 Gm45655-201ENSMUST00000211625 160 ntBASIC1.55□□□□□ -2.16
Usp40Q8BWR4 Gm25541-201ENSMUST00000116888 126 ntBASIC1.54□□□□□ -2.16
Usp40Q8BWR4 Gm23630-201ENSMUST00000175292 104 ntBASIC1.54□□□□□ -2.16
Usp40Q8BWR4 CT030170.1-201ENSMUST00000222183 148 ntBASIC1.54□□□□□ -2.16
Usp40Q8BWR4 Gm22980-201ENSMUST00000082608 70 ntBASIC1.54□□□□□ -2.16
Usp40Q8BWR4 Gm23500-201ENSMUST00000157735 98 ntBASIC1.53□□□□□ -2.16
Usp40Q8BWR4 Gm25648-201ENSMUST00000177844 79 ntBASIC1.53□□□□□ -2.16
Usp40Q8BWR4 Mir7673-201ENSMUST00000184567 64 ntBASIC1.53□□□□□ -2.16
Usp40Q8BWR4 Gm29432-201ENSMUST00000185397 139 ntBASIC1.53□□□□□ -2.16
Usp40Q8BWR4 Gm23730-201ENSMUST00000083236 107 ntBASIC1.53□□□□□ -2.16
Usp40Q8BWR4 Mir653-201ENSMUST00000102402 85 ntBASIC1.52□□□□□ -2.17
Usp40Q8BWR4 Gm22100-201ENSMUST00000157926 63 ntBASIC1.52□□□□□ -2.17
Usp40Q8BWR4 Gm26038-201ENSMUST00000158151 106 ntBASIC1.52□□□□□ -2.17
Usp40Q8BWR4 Gm23339-201ENSMUST00000158962 139 ntBASIC1.52□□□□□ -2.17
Usp40Q8BWR4 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Usp40Q8BWR4 Mir6381-201ENSMUST00000183426 87 ntBASIC1.52□□□□□ -2.17
Usp40Q8BWR4 Gm27977-201ENSMUST00000185159 111 ntBASIC1.52□□□□□ -2.17
Usp40Q8BWR4 Mir709-201ENSMUST00000102190 88 ntBASIC1.51□□□□□ -2.17
Usp40Q8BWR4 Gm22149-201ENSMUST00000104442 136 ntBASIC1.51□□□□□ -2.17
Usp40Q8BWR4 Mir876-201ENSMUST00000104659 81 ntBASIC1.51□□□□□ -2.17
Usp40Q8BWR4 Gm25440-201ENSMUST00000158279 154 ntBASIC1.51□□□□□ -2.17
Usp40Q8BWR4 Mir1933-201ENSMUST00000158930 88 ntBASIC1.51□□□□□ -2.17
Usp40Q8BWR4 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.51□□□□□ -2.17
Usp40Q8BWR4 Gm25465-201ENSMUST00000157716 105 ntBASIC1.5□□□□□ -2.17
Usp40Q8BWR4 Gm23114-201ENSMUST00000158478 117 ntBASIC1.5□□□□□ -2.17
Usp40Q8BWR4 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.5□□□□□ -2.17
Usp40Q8BWR4 Gm27656-201ENSMUST00000185055 80 ntBASIC1.5□□□□□ -2.17
Usp40Q8BWR4 Gm22459-201ENSMUST00000082577 108 ntBASIC1.5□□□□□ -2.17
Usp40Q8BWR4 Gm24494-201ENSMUST00000083804 81 ntBASIC1.5□□□□□ -2.17
Usp40Q8BWR4 Gm24500-201ENSMUST00000158447 124 ntBASIC1.49□□□□□ -2.17
Usp40Q8BWR4 Gm23340-201ENSMUST00000158955 123 ntBASIC1.49□□□□□ -2.17
Usp40Q8BWR4 Gm22401-201ENSMUST00000174927 117 ntBASIC1.49□□□□□ -2.17
Usp40Q8BWR4 Gm27937-201ENSMUST00000183605 88 ntBASIC1.49□□□□□ -2.17
Usp40Q8BWR4 Mir377-201ENSMUST00000083504 68 ntBASIC1.49□□□□□ -2.17
Usp40Q8BWR4 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Usp40Q8BWR4 Gm25170-201ENSMUST00000104191 129 ntBASIC1.48□□□□□ -2.17
Usp40Q8BWR4 Gm25506-201ENSMUST00000104339 70 ntBASIC1.48□□□□□ -2.17
Usp40Q8BWR4 Gm22541-201ENSMUST00000158165 127 ntBASIC1.48□□□□□ -2.17
Usp40Q8BWR4 Mir22-201ENSMUST00000083595 95 ntBASIC1.48□□□□□ -2.17
Usp40Q8BWR4 Gm26375-201ENSMUST00000101829 106 ntBASIC1.47□□□□□ -2.17
Usp40Q8BWR4 Gm25040-201ENSMUST00000103877 66 ntBASIC1.47□□□□□ -2.17
Usp40Q8BWR4 Snord69-201ENSMUST00000104024 80 ntBASIC1.47□□□□□ -2.17
Usp40Q8BWR4 Mir8119-201ENSMUST00000183371 129 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 297.7 ms