Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm11857-201ENSMUST00000119817 324 ntBASIC1.38□□□□□ -2.19
Trim56Q80VI1 Gm25622-201ENSMUST00000157217 104 ntBASIC1.38□□□□□ -2.19
Trim56Q80VI1 Gm24868-201ENSMUST00000157265 136 ntBASIC1.38□□□□□ -2.19
Trim56Q80VI1 Gm23715-201ENSMUST00000157354 106 ntBASIC1.38□□□□□ -2.19
Trim56Q80VI1 Gm24077-201ENSMUST00000158183 136 ntBASIC1.38□□□□□ -2.19
Trim56Q80VI1 Gm23853-201ENSMUST00000158375 104 ntBASIC1.38□□□□□ -2.19
Trim56Q80VI1 Gm25166-201ENSMUST00000158909 111 ntBASIC1.38□□□□□ -2.19
Trim56Q80VI1 Gm23636-201ENSMUST00000175070 95 ntBASIC1.38□□□□□ -2.19
Trim56Q80VI1 Mir34c-201ENSMUST00000083653 77 ntBASIC1.38□□□□□ -2.19
Trim56Q80VI1 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.38□□□□□ -2.19
Trim56Q80VI1 Gm23329-201ENSMUST00000157415 108 ntBASIC1.37□□□□□ -2.19
Trim56Q80VI1 Mir200b-201ENSMUST00000083615 70 ntBASIC1.37□□□□□ -2.19
Trim56Q80VI1 Gm27415-201ENSMUST00000183720 95 ntBASIC1.36□□□□□ -2.19
Trim56Q80VI1 Mir6394-201ENSMUST00000184738 99 ntBASIC1.36□□□□□ -2.19
Trim56Q80VI1 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.36□□□□□ -2.19
Trim56Q80VI1 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Trim56Q80VI1 Gm24252-201ENSMUST00000083700 132 ntBASIC1.36□□□□□ -2.19
Trim56Q80VI1 Gm22786-201ENSMUST00000104086 122 ntBASIC1.35□□□□□ -2.19
Trim56Q80VI1 Gm23989-201ENSMUST00000117030 66 ntBASIC1.35□□□□□ -2.19
Trim56Q80VI1 Gm6985-201ENSMUST00000121255 271 ntBASIC1.35□□□□□ -2.19
Trim56Q80VI1 Gm22522-201ENSMUST00000158271 151 ntBASIC1.35□□□□□ -2.19
Trim56Q80VI1 Gm24221-201ENSMUST00000158833 313 ntBASIC1.35□□□□□ -2.19
Trim56Q80VI1 Gm27656-201ENSMUST00000185055 80 ntBASIC1.35□□□□□ -2.19
Trim56Q80VI1 Gm24342-201ENSMUST00000103907 104 ntBASIC1.34□□□□□ -2.19
Trim56Q80VI1 Mir1949-202ENSMUST00000199259 70 ntBASIC1.34□□□□□ -2.19
Trim56Q80VI1 Gm22980-201ENSMUST00000082608 70 ntBASIC1.34□□□□□ -2.19
Trim56Q80VI1 Gm22652-201ENSMUST00000083207 131 ntBASIC1.34□□□□□ -2.19
Trim56Q80VI1 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.34□□□□□ -2.19
Trim56Q80VI1 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
Trim56Q80VI1 Gm25417-201ENSMUST00000104212 131 ntBASIC1.33□□□□□ -2.2
Trim56Q80VI1 Snord71-201ENSMUST00000104361 85 ntBASIC1.33□□□□□ -2.2
Trim56Q80VI1 Gm13065-201ENSMUST00000119178 141 ntBASIC1.33□□□□□ -2.2
Trim56Q80VI1 Gm23328-201ENSMUST00000157418 132 ntBASIC1.33□□□□□ -2.2
Trim56Q80VI1 Gm27717-201ENSMUST00000183933 151 ntBASIC1.33□□□□□ -2.2
Trim56Q80VI1 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.33□□□□□ -2.2
Trim56Q80VI1 Gm23347-201ENSMUST00000083823 82 ntBASIC1.33□□□□□ -2.2
Trim56Q80VI1 Gm22663-201ENSMUST00000158721 102 ntBASIC1.32□□□□□ -2.2
Trim56Q80VI1 Mir6342-201ENSMUST00000183870 125 ntBASIC1.32□□□□□ -2.2
Trim56Q80VI1 Mir6985-201ENSMUST00000184641 61 ntBASIC1.32□□□□□ -2.2
Trim56Q80VI1 Gm23245-201ENSMUST00000083370 135 ntBASIC1.32□□□□□ -2.2
Trim56Q80VI1 Gm24983-201ENSMUST00000104457 69 ntBASIC1.31□□□□□ -2.2
Trim56Q80VI1 Gm23500-201ENSMUST00000157735 98 ntBASIC1.31□□□□□ -2.2
Trim56Q80VI1 Gm23340-201ENSMUST00000158955 123 ntBASIC1.31□□□□□ -2.2
Trim56Q80VI1 Mir6381-201ENSMUST00000183426 87 ntBASIC1.31□□□□□ -2.2
Trim56Q80VI1 Gm42506-201ENSMUST00000202009 150 ntBASIC1.31□□□□□ -2.2
Trim56Q80VI1 Gm24064-201ENSMUST00000157486 106 ntBASIC1.3□□□□□ -2.2
Trim56Q80VI1 Gm24073-201ENSMUST00000158177 106 ntBASIC1.3□□□□□ -2.2
Trim56Q80VI1 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.3□□□□□ -2.2
Trim56Q80VI1 Gm23056-201ENSMUST00000082803 111 ntBASIC1.3□□□□□ -2.2
Trim56Q80VI1 Mir101a-201ENSMUST00000083517 83 ntBASIC1.3□□□□□ -2.2
Trim56Q80VI1 Gm25991-201ENSMUST00000102439 99 ntBASIC1.29□□□□□ -2.2
Trim56Q80VI1 Gm25609-201ENSMUST00000104019 104 ntBASIC1.29□□□□□ -2.2
Trim56Q80VI1 Gm24988-201ENSMUST00000104460 121 ntBASIC1.29□□□□□ -2.2
Trim56Q80VI1 Snord2-201ENSMUST00000157899 69 ntBASIC1.29□□□□□ -2.2
Trim56Q80VI1 Mir15a-201ENSMUST00000175266 84 ntBASIC1.29□□□□□ -2.2
Trim56Q80VI1 Mir344-201ENSMUST00000083634 95 ntBASIC1.29□□□□□ -2.2
Trim56Q80VI1 Gm23708-201ENSMUST00000104367 123 ntBASIC1.28□□□□□ -2.2
Trim56Q80VI1 Gm22540-201ENSMUST00000158168 117 ntBASIC1.28□□□□□ -2.2
Trim56Q80VI1 Gm22406-201ENSMUST00000174923 93 ntBASIC1.28□□□□□ -2.2
Trim56Q80VI1 Mir1954-201ENSMUST00000175595 86 ntBASIC1.28□□□□□ -2.2
Trim56Q80VI1 Mir22-201ENSMUST00000083595 95 ntBASIC1.28□□□□□ -2.2
Trim56Q80VI1 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.27□□□□□ -2.21
Trim56Q80VI1 Gm23416-201ENSMUST00000175520 95 ntBASIC1.27□□□□□ -2.21
Trim56Q80VI1 Mir7010-201ENSMUST00000183464 63 ntBASIC1.27□□□□□ -2.21
Trim56Q80VI1 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.26□□□□□ -2.21
Trim56Q80VI1 Gm24500-201ENSMUST00000158447 124 ntBASIC1.26□□□□□ -2.21
Trim56Q80VI1 Gm26363-201ENSMUST00000158866 83 ntBASIC1.26□□□□□ -2.21
Trim56Q80VI1 Gm24495-201ENSMUST00000178575 79 ntBASIC1.26□□□□□ -2.21
Trim56Q80VI1 Gm22253-201ENSMUST00000179870 79 ntBASIC1.26□□□□□ -2.21
Trim56Q80VI1 Gm44458-201ENSMUST00000196594 143 ntBASIC1.26□□□□□ -2.21
Trim56Q80VI1 Gm44211-201ENSMUST00000204867 145 ntBASIC1.26□□□□□ -2.21
Trim56Q80VI1 Mir33-201ENSMUST00000083531 69 ntBASIC1.26□□□□□ -2.21
Trim56Q80VI1 Gm24233-201ENSMUST00000104317 122 ntBASIC1.25□□□□□ -2.21
Trim56Q80VI1 Gm24942-201ENSMUST00000158328 114 ntBASIC1.25□□□□□ -2.21
Trim56Q80VI1 Gm25768-201ENSMUST00000158570 98 ntBASIC1.25□□□□□ -2.21
Trim56Q80VI1 Gm26499-201ENSMUST00000178544 79 ntBASIC1.25□□□□□ -2.21
Trim56Q80VI1 Gm26096-201ENSMUST00000179084 79 ntBASIC1.25□□□□□ -2.21
Trim56Q80VI1 Mir196b-201ENSMUST00000083509 85 ntBASIC1.25□□□□□ -2.21
Trim56Q80VI1 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Trim56Q80VI1 Gm22565-201ENSMUST00000175540 69 ntBASIC1.24□□□□□ -2.21
Trim56Q80VI1 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Trim56Q80VI1 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.23□□□□□ -2.21
Trim56Q80VI1 Gm22520-201ENSMUST00000158269 129 ntBASIC1.23□□□□□ -2.21
Trim56Q80VI1 Gm22074-201ENSMUST00000158595 113 ntBASIC1.23□□□□□ -2.21
Trim56Q80VI1 Gm25160-201ENSMUST00000158914 102 ntBASIC1.23□□□□□ -2.21
Trim56Q80VI1 Gm6293-201ENSMUST00000050339 195 ntBASIC1.23□□□□□ -2.21
Trim56Q80VI1 Gm23293-201ENSMUST00000082552 104 ntBASIC1.23□□□□□ -2.21
Trim56Q80VI1 Gm25138-201ENSMUST00000083248 136 ntBASIC1.23□□□□□ -2.21
Trim56Q80VI1 Gm25619-201ENSMUST00000122621 104 ntBASIC1.22□□□□□ -2.21
Trim56Q80VI1 Gm23570-201ENSMUST00000083029 104 ntBASIC1.22□□□□□ -2.21
Trim56Q80VI1 Gm25715-201ENSMUST00000158627 125 ntBASIC1.21□□□□□ -2.22
Trim56Q80VI1 Gm26359-201ENSMUST00000158873 101 ntBASIC1.21□□□□□ -2.22
Trim56Q80VI1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trim56Q80VI1 Mir7663-201ENSMUST00000183950 61 ntBASIC1.2□□□□□ -2.22
Trim56Q80VI1 Gm25300-201ENSMUST00000175284 84 ntBASIC1.19□□□□□ -2.22
Trim56Q80VI1 Gm23012-201ENSMUST00000104149 83 ntBASIC1.18□□□□□ -2.22
Trim56Q80VI1 Gm22203-201ENSMUST00000158605 58 ntBASIC1.18□□□□□ -2.22
Trim56Q80VI1 Gm11333-201ENSMUST00000119479 148 ntBASIC1.17□□□□□ -2.22
Trim56Q80VI1 Gm25964-201ENSMUST00000157171 97 ntBASIC1.17□□□□□ -2.22
Trim56Q80VI1 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 169.9 ms