Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm22340-201ENSMUST00000157717 114 ntBASIC0.78□□□□□ -2.28
Ddx55Q6ZPL9 Gm20386-201ENSMUST00000174010 132 ntBASIC0.78□□□□□ -2.28
Ddx55Q6ZPL9 Gm24801-201ENSMUST00000178503 105 ntBASIC0.78□□□□□ -2.28
Ddx55Q6ZPL9 Mir200a-201ENSMUST00000083466 90 ntBASIC0.78□□□□□ -2.28
Ddx55Q6ZPL9 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0.78□□□□□ -2.28
Ddx55Q6ZPL9 Mir29a-201ENSMUST00000083676 88 ntBASIC0.78□□□□□ -2.28
Ddx55Q6ZPL9 Gm24233-201ENSMUST00000104317 122 ntBASIC0.77□□□□□ -2.29
Ddx55Q6ZPL9 Gm27289-201ENSMUST00000183341 82 ntBASIC0.77□□□□□ -2.29
Ddx55Q6ZPL9 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.77□□□□□ -2.29
Ddx55Q6ZPL9 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.77□□□□□ -2.29
Ddx55Q6ZPL9 Gm23605-201ENSMUST00000157255 127 ntBASIC0.76□□□□□ -2.29
Ddx55Q6ZPL9 Gm22770-201ENSMUST00000158368 67 ntBASIC0.76□□□□□ -2.29
Ddx55Q6ZPL9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.76□□□□□ -2.29
Ddx55Q6ZPL9 Gm25633-201ENSMUST00000178565 107 ntBASIC0.76□□□□□ -2.29
Ddx55Q6ZPL9 Gm38113-201ENSMUST00000193704 201 ntBASIC0.76□□□□□ -2.29
Ddx55Q6ZPL9 Gm43907-201ENSMUST00000203128 117 ntBASIC0.76□□□□□ -2.29
Ddx55Q6ZPL9 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.76□□□□□ -2.29
Ddx55Q6ZPL9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.76□□□□□ -2.29
Ddx55Q6ZPL9 Gm22672-201ENSMUST00000104414 134 ntBASIC0.75□□□□□ -2.29
Ddx55Q6ZPL9 Gm26478-201ENSMUST00000122611 133 ntBASIC0.75□□□□□ -2.29
Ddx55Q6ZPL9 Gm24321-201ENSMUST00000175348 80 ntBASIC0.75□□□□□ -2.29
Ddx55Q6ZPL9 Mir3083-201ENSMUST00000175377 64 ntBASIC0.75□□□□□ -2.29
Ddx55Q6ZPL9 Gm25247-201ENSMUST00000175475 90 ntBASIC0.75□□□□□ -2.29
Ddx55Q6ZPL9 Gm26712-201ENSMUST00000180813 217 ntBASIC0.75□□□□□ -2.29
Ddx55Q6ZPL9 Gm27943-201ENSMUST00000184844 116 ntBASIC0.75□□□□□ -2.29
Ddx55Q6ZPL9 Gm25894-201ENSMUST00000083458 75 ntBASIC0.75□□□□□ -2.29
Ddx55Q6ZPL9 Gm23708-201ENSMUST00000104367 123 ntBASIC0.74□□□□□ -2.29
Ddx55Q6ZPL9 Gm24555-201ENSMUST00000104548 124 ntBASIC0.74□□□□□ -2.29
Ddx55Q6ZPL9 Gm23291-201ENSMUST00000175611 78 ntBASIC0.73□□□□□ -2.29
Ddx55Q6ZPL9 Gm44455-201ENSMUST00000200061 82 ntBASIC0.73□□□□□ -2.29
Ddx55Q6ZPL9 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.73□□□□□ -2.29
Ddx55Q6ZPL9 Mir450b-201ENSMUST00000102095 82 ntBASIC0.72□□□□□ -2.29
Ddx55Q6ZPL9 Gm23261-201ENSMUST00000158316 136 ntBASIC0.72□□□□□ -2.29
Ddx55Q6ZPL9 Mir5619-201ENSMUST00000176065 61 ntBASIC0.72□□□□□ -2.29
Ddx55Q6ZPL9 Mir509-201ENSMUST00000196089 75 ntBASIC0.72□□□□□ -2.29
Ddx55Q6ZPL9 AC157602.1-201ENSMUST00000197446 105 ntBASIC0.71□□□□□ -2.3
Ddx55Q6ZPL9 Gm25289-201ENSMUST00000122799 119 ntBASIC0.7□□□□□ -2.3
Ddx55Q6ZPL9 Gm24650-201ENSMUST00000157105 103 ntBASIC0.7□□□□□ -2.3
Ddx55Q6ZPL9 Gm22845-201ENSMUST00000157712 104 ntBASIC0.7□□□□□ -2.3
Ddx55Q6ZPL9 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.7□□□□□ -2.3
Ddx55Q6ZPL9 Gm22140-201ENSMUST00000158745 120 ntBASIC0.69□□□□□ -2.3
Ddx55Q6ZPL9 Gm25449-201ENSMUST00000179389 79 ntBASIC0.69□□□□□ -2.3
Ddx55Q6ZPL9 Gm26466-201ENSMUST00000179615 79 ntBASIC0.69□□□□□ -2.3
Ddx55Q6ZPL9 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.69□□□□□ -2.3
Ddx55Q6ZPL9 Gm22100-201ENSMUST00000157926 63 ntBASIC0.68□□□□□ -2.3
Ddx55Q6ZPL9 Gm25366-201ENSMUST00000158845 124 ntBASIC0.68□□□□□ -2.3
Ddx55Q6ZPL9 Gm26236-201ENSMUST00000175536 137 ntBASIC0.68□□□□□ -2.3
Ddx55Q6ZPL9 Gm23790-201ENSMUST00000083013 107 ntBASIC0.68□□□□□ -2.3
Ddx55Q6ZPL9 Snord2-201ENSMUST00000157899 69 ntBASIC0.67□□□□□ -2.3
Ddx55Q6ZPL9 Gm27686-201ENSMUST00000185123 91 ntBASIC0.67□□□□□ -2.3
Ddx55Q6ZPL9 Mir7229-201ENSMUST00000197062 53 ntBASIC0.67□□□□□ -2.3
Ddx55Q6ZPL9 Gm3702-201ENSMUST00000211754 346 ntBASIC0.67□□□□□ -2.3
Ddx55Q6ZPL9 Gm24697-201ENSMUST00000083881 107 ntBASIC0.67□□□□□ -2.3
Ddx55Q6ZPL9 Gm24772-201ENSMUST00000158507 110 ntBASIC0.66□□□□□ -2.3
Ddx55Q6ZPL9 Mir6389-201ENSMUST00000183661 102 ntBASIC0.66□□□□□ -2.3
Ddx55Q6ZPL9 Gm24202-201ENSMUST00000082948 103 ntBASIC0.66□□□□□ -2.3
Ddx55Q6ZPL9 Gm26484-201ENSMUST00000158018 106 ntBASIC0.64□□□□□ -2.31
Ddx55Q6ZPL9 Gm22522-201ENSMUST00000158271 151 ntBASIC0.64□□□□□ -2.31
Ddx55Q6ZPL9 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.63□□□□□ -2.31
Ddx55Q6ZPL9 Mir1197-201ENSMUST00000117037 120 ntBASIC0.63□□□□□ -2.31
Ddx55Q6ZPL9 Gm20108-201ENSMUST00000219977 153 ntBASIC0.63□□□□□ -2.31
Ddx55Q6ZPL9 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Ddx55Q6ZPL9 Gm24278-201ENSMUST00000104239 127 ntBASIC0.62□□□□□ -2.31
Ddx55Q6ZPL9 Gm25375-201ENSMUST00000158157 135 ntBASIC0.62□□□□□ -2.31
Ddx55Q6ZPL9 Gm23349-201ENSMUST00000158432 98 ntBASIC0.62□□□□□ -2.31
Ddx55Q6ZPL9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.62□□□□□ -2.31
Ddx55Q6ZPL9 Gm23012-201ENSMUST00000104149 83 ntBASIC0.61□□□□□ -2.31
Ddx55Q6ZPL9 Gm24384-201ENSMUST00000122693 75 ntBASIC0.61□□□□□ -2.31
Ddx55Q6ZPL9 Gm44457-201ENSMUST00000198109 76 ntBASIC0.61□□□□□ -2.31
Ddx55Q6ZPL9 Gm22303-201ENSMUST00000082686 122 ntBASIC0.61□□□□□ -2.31
Ddx55Q6ZPL9 Gm23672-201ENSMUST00000157471 107 ntBASIC0.6□□□□□ -2.31
Ddx55Q6ZPL9 Mir3105-201ENSMUST00000175480 85 ntBASIC0.6□□□□□ -2.31
Ddx55Q6ZPL9 Gm29047-201ENSMUST00000189816 108 ntBASIC0.59□□□□□ -2.31
Ddx55Q6ZPL9 Gm44327-201ENSMUST00000200068 117 ntBASIC0.59□□□□□ -2.31
Ddx55Q6ZPL9 Gm24983-201ENSMUST00000104457 69 ntBASIC0.57□□□□□ -2.32
Ddx55Q6ZPL9 Gm26425-201ENSMUST00000122529 82 ntBASIC0.57□□□□□ -2.32
Ddx55Q6ZPL9 Gm24963-201ENSMUST00000157916 144 ntBASIC0.57□□□□□ -2.32
Ddx55Q6ZPL9 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.57□□□□□ -2.32
Ddx55Q6ZPL9 Gm22406-201ENSMUST00000174923 93 ntBASIC0.56□□□□□ -2.32
Ddx55Q6ZPL9 Gm23369-201ENSMUST00000175406 105 ntBASIC0.56□□□□□ -2.32
Ddx55Q6ZPL9 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.56□□□□□ -2.32
Ddx55Q6ZPL9 Gm45541-201ENSMUST00000210443 54 ntBASIC0.56□□□□□ -2.32
Ddx55Q6ZPL9 AC122327.1-201ENSMUST00000220778 108 ntBASIC0.56□□□□□ -2.32
Ddx55Q6ZPL9 Gm25229-201ENSMUST00000178587 79 ntBASIC0.55□□□□□ -2.32
Ddx55Q6ZPL9 Gm27639-201ENSMUST00000184937 85 ntBASIC0.55□□□□□ -2.32
Ddx55Q6ZPL9 Gm44828-201ENSMUST00000203745 106 ntBASIC0.55□□□□□ -2.32
Ddx55Q6ZPL9 Gm22429-201ENSMUST00000158553 130 ntBASIC0.54□□□□□ -2.32
Ddx55Q6ZPL9 Gm27607-201ENSMUST00000185162 122 ntBASIC0.54□□□□□ -2.32
Ddx55Q6ZPL9 Snord95-201ENSMUST00000082846 68 ntBASIC0.54□□□□□ -2.32
Ddx55Q6ZPL9 Mir5117-201ENSMUST00000083226 84 ntBASIC0.54□□□□□ -2.32
Ddx55Q6ZPL9 Gm22732-201ENSMUST00000158093 121 ntBASIC0.53□□□□□ -2.32
Ddx55Q6ZPL9 Gm22239-201ENSMUST00000175220 103 ntBASIC0.53□□□□□ -2.32
Ddx55Q6ZPL9 Gm22302-201ENSMUST00000082657 106 ntBASIC0.53□□□□□ -2.32
Ddx55Q6ZPL9 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
Ddx55Q6ZPL9 Gm25622-201ENSMUST00000157217 104 ntBASIC0.52□□□□□ -2.33
Ddx55Q6ZPL9 Gm22088-201ENSMUST00000158341 117 ntBASIC0.52□□□□□ -2.33
Ddx55Q6ZPL9 Gm22203-201ENSMUST00000158605 58 ntBASIC0.52□□□□□ -2.33
Ddx55Q6ZPL9 Gm23180-201ENSMUST00000158686 125 ntBASIC0.52□□□□□ -2.33
Ddx55Q6ZPL9 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Ddx55Q6ZPL9 Mir669f-201ENSMUST00000103850 121 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 163.1 ms