Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm23114-201ENSMUST00000158478 117 ntBASIC1.58□□□□□ -2.16
Rnf43Q5NCP0 Gm27248-201ENSMUST00000184004 166 ntBASIC1.58□□□□□ -2.16
Rnf43Q5NCP0 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.58□□□□□ -2.16
Rnf43Q5NCP0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
Rnf43Q5NCP0 Gm26257-201ENSMUST00000122500 107 ntBASIC1.57□□□□□ -2.16
Rnf43Q5NCP0 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.57□□□□□ -2.16
Rnf43Q5NCP0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.56□□□□□ -2.16
Rnf43Q5NCP0 Gm22786-201ENSMUST00000104086 122 ntBASIC1.56□□□□□ -2.16
Rnf43Q5NCP0 Gm27450-201ENSMUST00000104632 90 ntBASIC1.56□□□□□ -2.16
Rnf43Q5NCP0 Gm25328-201ENSMUST00000175013 107 ntBASIC1.56□□□□□ -2.16
Rnf43Q5NCP0 Mir3968-201ENSMUST00000175355 100 ntBASIC1.56□□□□□ -2.16
Rnf43Q5NCP0 Gm44396-201ENSMUST00000199843 114 ntBASIC1.56□□□□□ -2.16
Rnf43Q5NCP0 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.56□□□□□ -2.16
Rnf43Q5NCP0 Gm25183-201ENSMUST00000157752 106 ntBASIC1.55□□□□□ -2.16
Rnf43Q5NCP0 Gm22100-201ENSMUST00000157926 63 ntBASIC1.55□□□□□ -2.16
Rnf43Q5NCP0 Mir6240-201ENSMUST00000184281 117 ntBASIC1.55□□□□□ -2.16
Rnf43Q5NCP0 Gm43944-201ENSMUST00000205220 120 ntBASIC1.55□□□□□ -2.16
Rnf43Q5NCP0 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Rnf43Q5NCP0 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Rnf43Q5NCP0 Gm25274-201ENSMUST00000104296 135 ntBASIC1.54□□□□□ -2.16
Rnf43Q5NCP0 Gm22673-201ENSMUST00000104415 131 ntBASIC1.54□□□□□ -2.16
Rnf43Q5NCP0 Mir6962-201ENSMUST00000199512 63 ntBASIC1.54□□□□□ -2.16
Rnf43Q5NCP0 Gm26224-201ENSMUST00000082506 80 ntBASIC1.54□□□□□ -2.16
Rnf43Q5NCP0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Rnf43Q5NCP0 Gm23991-201ENSMUST00000117033 93 ntBASIC1.53□□□□□ -2.16
Rnf43Q5NCP0 Gm24808-201ENSMUST00000157993 118 ntBASIC1.53□□□□□ -2.16
Rnf43Q5NCP0 Gm24222-201ENSMUST00000158834 93 ntBASIC1.53□□□□□ -2.16
Rnf43Q5NCP0 Gm23339-201ENSMUST00000158962 139 ntBASIC1.53□□□□□ -2.16
Rnf43Q5NCP0 Mir3098-201ENSMUST00000175416 87 ntBASIC1.53□□□□□ -2.16
Rnf43Q5NCP0 Gm23649-201ENSMUST00000179007 107 ntBASIC1.53□□□□□ -2.16
Rnf43Q5NCP0 Gm27265-201ENSMUST00000183559 77 ntBASIC1.53□□□□□ -2.16
Rnf43Q5NCP0 Gm25652-201ENSMUST00000083780 103 ntBASIC1.53□□□□□ -2.16
Rnf43Q5NCP0 Snord2-201ENSMUST00000157899 69 ntBASIC1.52□□□□□ -2.17
Rnf43Q5NCP0 Gm24174-201ENSMUST00000158933 111 ntBASIC1.52□□□□□ -2.17
Rnf43Q5NCP0 Mir8119-201ENSMUST00000183371 129 ntBASIC1.52□□□□□ -2.17
Rnf43Q5NCP0 Gm23336-201ENSMUST00000117023 123 ntBASIC1.51□□□□□ -2.17
Rnf43Q5NCP0 Gm22039-201ENSMUST00000157278 132 ntBASIC1.51□□□□□ -2.17
Rnf43Q5NCP0 Gm23500-201ENSMUST00000157735 98 ntBASIC1.51□□□□□ -2.17
Rnf43Q5NCP0 Mir1933-201ENSMUST00000158930 88 ntBASIC1.51□□□□□ -2.17
Rnf43Q5NCP0 Mir3108-201ENSMUST00000175500 79 ntBASIC1.51□□□□□ -2.17
Rnf43Q5NCP0 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.51□□□□□ -2.17
Rnf43Q5NCP0 Gm23301-201ENSMUST00000082713 65 ntBASIC1.51□□□□□ -2.17
Rnf43Q5NCP0 Gm25128-201ENSMUST00000083339 76 ntBASIC1.51□□□□□ -2.17
Rnf43Q5NCP0 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
Rnf43Q5NCP0 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.51□□□□□ -2.17
Rnf43Q5NCP0 Mir343-201ENSMUST00000102360 75 ntBASIC1.5□□□□□ -2.17
Rnf43Q5NCP0 Gm24580-201ENSMUST00000103965 131 ntBASIC1.5□□□□□ -2.17
Rnf43Q5NCP0 Gm16399-201ENSMUST00000181423 219 ntBASIC1.5□□□□□ -2.17
Rnf43Q5NCP0 Gm45655-201ENSMUST00000211625 160 ntBASIC1.5□□□□□ -2.17
Rnf43Q5NCP0 Gm24201-201ENSMUST00000082946 125 ntBASIC1.5□□□□□ -2.17
Rnf43Q5NCP0 Gm24927-201ENSMUST00000083397 107 ntBASIC1.5□□□□□ -2.17
Rnf43Q5NCP0 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Gm25416-201ENSMUST00000104221 107 ntBASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Gm23130-201ENSMUST00000104252 74 ntBASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Mir876-201ENSMUST00000104659 81 ntBASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Gm23122-201ENSMUST00000157645 103 ntBASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Gm23558-201ENSMUST00000157823 80 ntBASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Gm22541-201ENSMUST00000158165 127 ntBASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Traj60-201ENSMUST00000167781 54 ntBASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Gm29432-201ENSMUST00000185397 139 ntBASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Gm44962-201ENSMUST00000206460 279 ntBASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Mir15b-201ENSMUST00000083646 64 ntBASIC1.49□□□□□ -2.17
Rnf43Q5NCP0 Gm23072-201ENSMUST00000158243 123 ntBASIC1.48□□□□□ -2.17
Rnf43Q5NCP0 Gm26139-201ENSMUST00000180098 107 ntBASIC1.48□□□□□ -2.17
Rnf43Q5NCP0 Gm27554-201ENSMUST00000185074 98 ntBASIC1.48□□□□□ -2.17
Rnf43Q5NCP0 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.48□□□□□ -2.17
Rnf43Q5NCP0 Gm23672-201ENSMUST00000157471 107 ntBASIC1.47□□□□□ -2.17
Rnf43Q5NCP0 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Rnf43Q5NCP0 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Rnf43Q5NCP0 Mir30a-201ENSMUST00000083471 71 ntBASIC1.47□□□□□ -2.17
Rnf43Q5NCP0 Gm12432-201ENSMUST00000119540 186 ntBASIC1.46□□□□□ -2.18
Rnf43Q5NCP0 Gm23329-201ENSMUST00000157415 108 ntBASIC1.46□□□□□ -2.18
Rnf43Q5NCP0 Gm24725-201ENSMUST00000158229 125 ntBASIC1.46□□□□□ -2.18
Rnf43Q5NCP0 Gm22466-201ENSMUST00000175278 69 ntBASIC1.46□□□□□ -2.18
Rnf43Q5NCP0 Mir6342-201ENSMUST00000183870 125 ntBASIC1.46□□□□□ -2.18
Rnf43Q5NCP0 Mir7059-201ENSMUST00000184825 59 ntBASIC1.46□□□□□ -2.18
Rnf43Q5NCP0 Gm26301-201ENSMUST00000104813 95 ntBASIC1.45□□□□□ -2.18
Rnf43Q5NCP0 Gm27493-201ENSMUST00000184128 78 ntBASIC1.45□□□□□ -2.18
Rnf43Q5NCP0 Mir376b-201ENSMUST00000195930 82 ntBASIC1.45□□□□□ -2.18
Rnf43Q5NCP0 Gm25170-201ENSMUST00000104191 129 ntBASIC1.44□□□□□ -2.18
Rnf43Q5NCP0 Gm24549-201ENSMUST00000158647 139 ntBASIC1.44□□□□□ -2.18
Rnf43Q5NCP0 Gm38323-201ENSMUST00000192450 210 ntBASIC1.44□□□□□ -2.18
Rnf43Q5NCP0 Mir377-201ENSMUST00000083504 68 ntBASIC1.44□□□□□ -2.18
Rnf43Q5NCP0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Rnf43Q5NCP0 Mir487b-201ENSMUST00000102265 82 ntBASIC1.43□□□□□ -2.18
Rnf43Q5NCP0 Snord69-201ENSMUST00000104024 80 ntBASIC1.43□□□□□ -2.18
Rnf43Q5NCP0 Gm24895-201ENSMUST00000122742 74 ntBASIC1.43□□□□□ -2.18
Rnf43Q5NCP0 Mir100-201ENSMUST00000175270 80 ntBASIC1.43□□□□□ -2.18
Rnf43Q5NCP0 Mir1954-201ENSMUST00000175595 86 ntBASIC1.43□□□□□ -2.18
Rnf43Q5NCP0 Gm27977-201ENSMUST00000185159 111 ntBASIC1.43□□□□□ -2.18
Rnf43Q5NCP0 Gm24624-201ENSMUST00000082617 164 ntBASIC1.43□□□□□ -2.18
Rnf43Q5NCP0 Gm24252-201ENSMUST00000083700 132 ntBASIC1.43□□□□□ -2.18
Rnf43Q5NCP0 Gm25040-201ENSMUST00000103877 66 ntBASIC1.42□□□□□ -2.18
Rnf43Q5NCP0 Gm22233-201ENSMUST00000157464 114 ntBASIC1.42□□□□□ -2.18
Rnf43Q5NCP0 Gm25868-201ENSMUST00000158253 114 ntBASIC1.42□□□□□ -2.18
Rnf43Q5NCP0 Gm22087-201ENSMUST00000158339 88 ntBASIC1.42□□□□□ -2.18
Rnf43Q5NCP0 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.42□□□□□ -2.18
Rnf43Q5NCP0 Mir7673-201ENSMUST00000184567 64 ntBASIC1.42□□□□□ -2.18
Rnf43Q5NCP0 CT030170.1-201ENSMUST00000222183 148 ntBASIC1.42□□□□□ -2.18
Rnf43Q5NCP0 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 192.1 ms