Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Mir376b-201ENSMUST00000195930 82 ntBASIC1.49□□□□□ -2.17
Limch1Q3UH68 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Limch1Q3UH68 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Limch1Q3UH68 Gm25609-201ENSMUST00000104019 104 ntBASIC1.48□□□□□ -2.17
Limch1Q3UH68 Gm11333-201ENSMUST00000119479 148 ntBASIC1.48□□□□□ -2.17
Limch1Q3UH68 Gm23328-201ENSMUST00000157418 132 ntBASIC1.48□□□□□ -2.17
Limch1Q3UH68 Gm24624-201ENSMUST00000082617 164 ntBASIC1.48□□□□□ -2.17
Limch1Q3UH68 Gm24252-201ENSMUST00000083700 132 ntBASIC1.48□□□□□ -2.17
Limch1Q3UH68 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
Limch1Q3UH68 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
Limch1Q3UH68 Gm25991-201ENSMUST00000102439 99 ntBASIC1.47□□□□□ -2.17
Limch1Q3UH68 Gm24865-201ENSMUST00000103246 96 ntBASIC1.47□□□□□ -2.17
Limch1Q3UH68 Gm25170-201ENSMUST00000104191 129 ntBASIC1.47□□□□□ -2.17
Limch1Q3UH68 Gm24983-201ENSMUST00000104457 69 ntBASIC1.47□□□□□ -2.17
Limch1Q3UH68 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Limch1Q3UH68 Gm26029-201ENSMUST00000158659 132 ntBASIC1.47□□□□□ -2.17
Limch1Q3UH68 Gm25160-201ENSMUST00000158914 102 ntBASIC1.47□□□□□ -2.17
Limch1Q3UH68 Gm26499-201ENSMUST00000178544 79 ntBASIC1.47□□□□□ -2.17
Limch1Q3UH68 Gm26096-201ENSMUST00000179084 79 ntBASIC1.47□□□□□ -2.17
Limch1Q3UH68 Mir7063-201ENSMUST00000184158 91 ntBASIC1.47□□□□□ -2.17
Limch1Q3UH68 Mir211-201ENSMUST00000083651 106 ntBASIC1.47□□□□□ -2.17
Limch1Q3UH68 Mir3079-201ENSMUST00000175428 90 ntBASIC1.46□□□□□ -2.18
Limch1Q3UH68 Mir1954-201ENSMUST00000175595 86 ntBASIC1.46□□□□□ -2.18
Limch1Q3UH68 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Limch1Q3UH68 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.45□□□□□ -2.18
Limch1Q3UH68 Gm23853-201ENSMUST00000158375 104 ntBASIC1.45□□□□□ -2.18
Limch1Q3UH68 Gm44483-201ENSMUST00000197203 97 ntBASIC1.45□□□□□ -2.18
Limch1Q3UH68 Gm11857-201ENSMUST00000119817 324 ntBASIC1.44□□□□□ -2.18
Limch1Q3UH68 Gm25619-201ENSMUST00000122621 104 ntBASIC1.44□□□□□ -2.18
Limch1Q3UH68 Gm27711-201ENSMUST00000183802 118 ntBASIC1.44□□□□□ -2.18
Limch1Q3UH68 Gm42533-201ENSMUST00000196247 157 ntBASIC1.44□□□□□ -2.18
Limch1Q3UH68 Mir1949-202ENSMUST00000199259 70 ntBASIC1.44□□□□□ -2.18
Limch1Q3UH68 Gm6293-201ENSMUST00000050339 195 ntBASIC1.44□□□□□ -2.18
Limch1Q3UH68 Gm23203-201ENSMUST00000104374 107 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm23237-201ENSMUST00000104639 92 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm23500-201ENSMUST00000157735 98 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Snord2-201ENSMUST00000157899 69 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm24073-201ENSMUST00000158177 106 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm22406-201ENSMUST00000174923 93 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm23410-201ENSMUST00000179967 107 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Mir6342-201ENSMUST00000183870 125 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm23376-201ENSMUST00000082938 160 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm22505-201ENSMUST00000082956 108 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm22363-201ENSMUST00000083100 108 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm22652-201ENSMUST00000083207 131 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm23814-201ENSMUST00000083230 102 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Mir196b-201ENSMUST00000083509 85 ntBASIC1.43□□□□□ -2.18
Limch1Q3UH68 Gm25495-201ENSMUST00000104431 131 ntBASIC1.42□□□□□ -2.18
Limch1Q3UH68 Gm23989-201ENSMUST00000117030 66 ntBASIC1.42□□□□□ -2.18
Limch1Q3UH68 Mir1197-201ENSMUST00000117037 120 ntBASIC1.42□□□□□ -2.18
Limch1Q3UH68 Gm13065-201ENSMUST00000119178 141 ntBASIC1.42□□□□□ -2.18
Limch1Q3UH68 Gm22485-201ENSMUST00000157990 109 ntBASIC1.42□□□□□ -2.18
Limch1Q3UH68 Gm27656-201ENSMUST00000185055 80 ntBASIC1.42□□□□□ -2.18
Limch1Q3UH68 Gm25964-201ENSMUST00000157171 97 ntBASIC1.41□□□□□ -2.18
Limch1Q3UH68 Gm26359-201ENSMUST00000158873 101 ntBASIC1.41□□□□□ -2.18
Limch1Q3UH68 Gm27717-201ENSMUST00000183933 151 ntBASIC1.41□□□□□ -2.18
Limch1Q3UH68 Gm24221-201ENSMUST00000158833 313 ntBASIC1.4□□□□□ -2.19
Limch1Q3UH68 Gm23761-201ENSMUST00000158347 104 ntBASIC1.39□□□□□ -2.19
Limch1Q3UH68 Mir448-201ENSMUST00000083516 112 ntBASIC1.39□□□□□ -2.19
Limch1Q3UH68 Gm25768-201ENSMUST00000158570 98 ntBASIC1.38□□□□□ -2.19
Limch1Q3UH68 Gm23340-201ENSMUST00000158955 123 ntBASIC1.38□□□□□ -2.19
Limch1Q3UH68 Gm22980-201ENSMUST00000082608 70 ntBASIC1.38□□□□□ -2.19
Limch1Q3UH68 Gm23708-201ENSMUST00000104367 123 ntBASIC1.37□□□□□ -2.19
Limch1Q3UH68 Gm25166-201ENSMUST00000158909 111 ntBASIC1.37□□□□□ -2.19
Limch1Q3UH68 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.37□□□□□ -2.19
Limch1Q3UH68 Gm22095-201ENSMUST00000158984 150 ntBASIC1.37□□□□□ -2.19
Limch1Q3UH68 Gm22413-201ENSMUST00000175465 85 ntBASIC1.37□□□□□ -2.19
Limch1Q3UH68 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.37□□□□□ -2.19
Limch1Q3UH68 Gm22203-201ENSMUST00000158605 58 ntBASIC1.36□□□□□ -2.19
Limch1Q3UH68 Mir6394-201ENSMUST00000184738 99 ntBASIC1.36□□□□□ -2.19
Limch1Q3UH68 Gm24233-201ENSMUST00000104317 122 ntBASIC1.35□□□□□ -2.19
Limch1Q3UH68 Gm24942-201ENSMUST00000158328 114 ntBASIC1.35□□□□□ -2.19
Limch1Q3UH68 Gm24500-201ENSMUST00000158447 124 ntBASIC1.35□□□□□ -2.19
Limch1Q3UH68 Gm22663-201ENSMUST00000158721 102 ntBASIC1.35□□□□□ -2.19
Limch1Q3UH68 Gm20305-201ENSMUST00000193226 177 ntBASIC1.35□□□□□ -2.19
Limch1Q3UH68 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.35□□□□□ -2.19
Limch1Q3UH68 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.35□□□□□ -2.19
Limch1Q3UH68 Snord71-201ENSMUST00000104361 85 ntBASIC1.34□□□□□ -2.19
Limch1Q3UH68 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Limch1Q3UH68 Gm25715-201ENSMUST00000158627 125 ntBASIC1.34□□□□□ -2.19
Limch1Q3UH68 Mir15a-201ENSMUST00000175266 84 ntBASIC1.34□□□□□ -2.19
Limch1Q3UH68 Gm23416-201ENSMUST00000175520 95 ntBASIC1.34□□□□□ -2.19
Limch1Q3UH68 Mir7010-201ENSMUST00000183464 63 ntBASIC1.34□□□□□ -2.19
Limch1Q3UH68 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
Limch1Q3UH68 Gm42506-201ENSMUST00000202009 150 ntBASIC1.33□□□□□ -2.2
Limch1Q3UH68 Gm44211-201ENSMUST00000204867 145 ntBASIC1.33□□□□□ -2.2
Limch1Q3UH68 Gm24134-201ENSMUST00000083361 71 ntBASIC1.33□□□□□ -2.2
Limch1Q3UH68 Mir101a-201ENSMUST00000083517 83 ntBASIC1.33□□□□□ -2.2
Limch1Q3UH68 Gm25756-201ENSMUST00000103990 136 ntBASIC1.32□□□□□ -2.2
Limch1Q3UH68 Gm26363-201ENSMUST00000158866 83 ntBASIC1.32□□□□□ -2.2
Limch1Q3UH68 Gm23306-201ENSMUST00000179058 105 ntBASIC1.32□□□□□ -2.2
Limch1Q3UH68 Gm23245-201ENSMUST00000083370 135 ntBASIC1.32□□□□□ -2.2
Limch1Q3UH68 Gm22520-201ENSMUST00000158269 129 ntBASIC1.31□□□□□ -2.2
Limch1Q3UH68 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.3□□□□□ -2.2
Limch1Q3UH68 Gm23826-201ENSMUST00000157394 119 ntBASIC1.3□□□□□ -2.2
Limch1Q3UH68 Mir7663-201ENSMUST00000183950 61 ntBASIC1.3□□□□□ -2.2
Limch1Q3UH68 Gm44490-201ENSMUST00000198566 127 ntBASIC1.3□□□□□ -2.2
Limch1Q3UH68 Mir126a-201ENSMUST00000083606 73 ntBASIC1.3□□□□□ -2.2
Limch1Q3UH68 Gm24342-201ENSMUST00000103907 104 ntBASIC1.29□□□□□ -2.2
Limch1Q3UH68 Gm23012-201ENSMUST00000104149 83 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms