Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm6293-201ENSMUST00000050339 195 ntBASIC1.31□□□□□ -2.2
Trim43cP86449 Gm25798-201ENSMUST00000082641 107 ntBASIC1.31□□□□□ -2.2
Trim43cP86449 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Trim43cP86449 Gm22203-201ENSMUST00000158605 58 ntBASIC1.3□□□□□ -2.2
Trim43cP86449 Mir30a-201ENSMUST00000083471 71 ntBASIC1.3□□□□□ -2.2
Trim43cP86449 Mir1197-201ENSMUST00000117037 120 ntBASIC1.29□□□□□ -2.2
Trim43cP86449 Gm25619-201ENSMUST00000122621 104 ntBASIC1.29□□□□□ -2.2
Trim43cP86449 Mir100-201ENSMUST00000175270 80 ntBASIC1.29□□□□□ -2.2
Trim43cP86449 Gm20305-201ENSMUST00000193226 177 ntBASIC1.29□□□□□ -2.2
Trim43cP86449 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
Trim43cP86449 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.28□□□□□ -2.2
Trim43cP86449 Gm25991-201ENSMUST00000102439 99 ntBASIC1.28□□□□□ -2.2
Trim43cP86449 Snord69-201ENSMUST00000104024 80 ntBASIC1.28□□□□□ -2.2
Trim43cP86449 Gm23991-201ENSMUST00000117033 93 ntBASIC1.28□□□□□ -2.2
Trim43cP86449 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Trim43cP86449 Gm23329-201ENSMUST00000157415 108 ntBASIC1.28□□□□□ -2.2
Trim43cP86449 Gm26359-201ENSMUST00000158873 101 ntBASIC1.28□□□□□ -2.2
Trim43cP86449 Gm22095-201ENSMUST00000158984 150 ntBASIC1.28□□□□□ -2.2
Trim43cP86449 Gm22406-201ENSMUST00000174923 93 ntBASIC1.28□□□□□ -2.2
Trim43cP86449 Mir3968-201ENSMUST00000175355 100 ntBASIC1.28□□□□□ -2.2
Trim43cP86449 Gm22149-201ENSMUST00000104442 136 ntBASIC1.27□□□□□ -2.21
Trim43cP86449 Gm25847-201ENSMUST00000116793 96 ntBASIC1.27□□□□□ -2.21
Trim43cP86449 Gm22541-201ENSMUST00000158165 127 ntBASIC1.27□□□□□ -2.21
Trim43cP86449 Gm24154-201ENSMUST00000175261 130 ntBASIC1.27□□□□□ -2.21
Trim43cP86449 Snora75-201ENSMUST00000082903 133 ntBASIC1.27□□□□□ -2.21
Trim43cP86449 Mir500-201ENSMUST00000093600 92 ntBASIC1.27□□□□□ -2.21
Trim43cP86449 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Trim43cP86449 Gm24983-201ENSMUST00000104457 69 ntBASIC1.26□□□□□ -2.21
Trim43cP86449 Gm23785-201ENSMUST00000116741 96 ntBASIC1.26□□□□□ -2.21
Trim43cP86449 Gm6985-201ENSMUST00000121255 271 ntBASIC1.26□□□□□ -2.21
Trim43cP86449 Gm24500-201ENSMUST00000158447 124 ntBASIC1.26□□□□□ -2.21
Trim43cP86449 Gm26363-201ENSMUST00000158866 83 ntBASIC1.26□□□□□ -2.21
Trim43cP86449 Gm22980-201ENSMUST00000082608 70 ntBASIC1.26□□□□□ -2.21
Trim43cP86449 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Trim43cP86449 Gm26274-201ENSMUST00000157103 321 ntBASIC1.25□□□□□ -2.21
Trim43cP86449 Gm22413-201ENSMUST00000175465 85 ntBASIC1.25□□□□□ -2.21
Trim43cP86449 Gm23726-201ENSMUST00000178937 67 ntBASIC1.25□□□□□ -2.21
Trim43cP86449 Mir7059-201ENSMUST00000184825 59 ntBASIC1.25□□□□□ -2.21
Trim43cP86449 Gm24311-201ENSMUST00000082570 104 ntBASIC1.25□□□□□ -2.21
Trim43cP86449 Gm24918-201ENSMUST00000083022 130 ntBASIC1.25□□□□□ -2.21
Trim43cP86449 Mir377-201ENSMUST00000083504 68 ntBASIC1.25□□□□□ -2.21
Trim43cP86449 Gm22780-201ENSMUST00000104084 132 ntBASIC1.24□□□□□ -2.21
Trim43cP86449 Gm24777-201ENSMUST00000157644 107 ntBASIC1.24□□□□□ -2.21
Trim43cP86449 Snord2-201ENSMUST00000157899 69 ntBASIC1.24□□□□□ -2.21
Trim43cP86449 Gm25166-201ENSMUST00000158909 111 ntBASIC1.24□□□□□ -2.21
Trim43cP86449 Gm24252-201ENSMUST00000083700 132 ntBASIC1.24□□□□□ -2.21
Trim43cP86449 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Trim43cP86449 Gm6272-201ENSMUST00000121256 171 ntBASIC1.23□□□□□ -2.21
Trim43cP86449 Mir1904-201ENSMUST00000122702 80 ntBASIC1.23□□□□□ -2.21
Trim43cP86449 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.23□□□□□ -2.21
Trim43cP86449 Gm25328-201ENSMUST00000175013 107 ntBASIC1.23□□□□□ -2.21
Trim43cP86449 Gm25950-201ENSMUST00000175331 100 ntBASIC1.23□□□□□ -2.21
Trim43cP86449 Mir3079-201ENSMUST00000175428 90 ntBASIC1.23□□□□□ -2.21
Trim43cP86449 Gm25354-201ENSMUST00000179110 105 ntBASIC1.23□□□□□ -2.21
Trim43cP86449 Gm22673-201ENSMUST00000104415 131 ntBASIC1.22□□□□□ -2.21
Trim43cP86449 Gm23826-201ENSMUST00000157394 119 ntBASIC1.22□□□□□ -2.21
Trim43cP86449 Mir8119-201ENSMUST00000183371 129 ntBASIC1.22□□□□□ -2.21
Trim43cP86449 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.22□□□□□ -2.21
Trim43cP86449 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.22□□□□□ -2.21
Trim43cP86449 Mir741-201ENSMUST00000103931 71 ntBASIC1.21□□□□□ -2.22
Trim43cP86449 Gm38323-201ENSMUST00000192450 210 ntBASIC1.21□□□□□ -2.22
Trim43cP86449 Gm25609-201ENSMUST00000104019 104 ntBASIC1.2□□□□□ -2.22
Trim43cP86449 Gm25416-201ENSMUST00000104221 107 ntBASIC1.2□□□□□ -2.22
Trim43cP86449 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trim43cP86449 Gm22100-201ENSMUST00000157926 63 ntBASIC1.2□□□□□ -2.22
Trim43cP86449 Gm26485-201ENSMUST00000158019 64 ntBASIC1.2□□□□□ -2.22
Trim43cP86449 Mir3064-201ENSMUST00000175532 67 ntBASIC1.2□□□□□ -2.22
Trim43cP86449 Mir6381-201ENSMUST00000183426 87 ntBASIC1.2□□□□□ -2.22
Trim43cP86449 Mir376b-201ENSMUST00000195930 82 ntBASIC1.2□□□□□ -2.22
Trim43cP86449 Mir126a-201ENSMUST00000083606 73 ntBASIC1.2□□□□□ -2.22
Trim43cP86449 Gm25040-201ENSMUST00000103877 66 ntBASIC1.19□□□□□ -2.22
Trim43cP86449 Gm12432-201ENSMUST00000119540 186 ntBASIC1.19□□□□□ -2.22
Trim43cP86449 Gm11966-201ENSMUST00000119907 87 ntBASIC1.19□□□□□ -2.22
Trim43cP86449 Gm23328-201ENSMUST00000157418 132 ntBASIC1.19□□□□□ -2.22
Trim43cP86449 Gm24020-201ENSMUST00000180156 108 ntBASIC1.19□□□□□ -2.22
Trim43cP86449 Gm42533-201ENSMUST00000196247 157 ntBASIC1.19□□□□□ -2.22
Trim43cP86449 Gm24134-201ENSMUST00000083361 71 ntBASIC1.19□□□□□ -2.22
Trim43cP86449 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trim43cP86449 Gm26301-201ENSMUST00000104813 95 ntBASIC1.18□□□□□ -2.22
Trim43cP86449 Gm24378-201ENSMUST00000122699 106 ntBASIC1.18□□□□□ -2.22
Trim43cP86449 Gm23636-201ENSMUST00000175070 95 ntBASIC1.18□□□□□ -2.22
Trim43cP86449 Mir1954-201ENSMUST00000175595 86 ntBASIC1.18□□□□□ -2.22
Trim43cP86449 Gm27974-201ENSMUST00000183415 105 ntBASIC1.18□□□□□ -2.22
Trim43cP86449 Gm27549-201ENSMUST00000183508 62 ntBASIC1.18□□□□□ -2.22
Trim43cP86449 Gm23893-201ENSMUST00000158106 134 ntBASIC1.17□□□□□ -2.22
Trim43cP86449 Gm23416-201ENSMUST00000175520 95 ntBASIC1.17□□□□□ -2.22
Trim43cP86449 Mir7052-201ENSMUST00000184821 65 ntBASIC1.17□□□□□ -2.22
Trim43cP86449 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Trim43cP86449 Mir1949-202ENSMUST00000199259 70 ntBASIC1.17□□□□□ -2.22
Trim43cP86449 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.17□□□□□ -2.22
Trim43cP86449 DQ267101-201ENSMUST00000082562 73 ntBASIC1.17□□□□□ -2.22
Trim43cP86449 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.17□□□□□ -2.22
Trim43cP86449 Mir22-201ENSMUST00000083595 95 ntBASIC1.17□□□□□ -2.22
Trim43cP86449 Gm25274-201ENSMUST00000104296 135 ntBASIC1.16□□□□□ -2.22
Trim43cP86449 Gm44211-201ENSMUST00000204867 145 ntBASIC1.16□□□□□ -2.22
Trim43cP86449 Snord35a-201ENSMUST00000083884 90 ntBASIC1.16□□□□□ -2.22
Trim43cP86449 Gm13065-201ENSMUST00000119178 141 ntBASIC1.15□□□□□ -2.23
Trim43cP86449 Gm23012-201ENSMUST00000104149 83 ntBASIC1.14□□□□□ -2.23
Trim43cP86449 Gm23989-201ENSMUST00000117030 66 ntBASIC1.14□□□□□ -2.23
Trim43cP86449 Gm23853-201ENSMUST00000158375 104 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms