Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm24377-201ENSMUST00000104398 131 ntBASIC1.75□□□□□ -2.13
Col18a1P39061 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col18a1P39061 Gm24770-201ENSMUST00000158505 92 ntBASIC1.75□□□□□ -2.13
Col18a1P39061 Gm22406-201ENSMUST00000174923 93 ntBASIC1.75□□□□□ -2.13
Col18a1P39061 Gm22127-201ENSMUST00000083239 106 ntBASIC1.75□□□□□ -2.13
Col18a1P39061 Gm24494-201ENSMUST00000083804 81 ntBASIC1.75□□□□□ -2.13
Col18a1P39061 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col18a1P39061 Gm22717-201ENSMUST00000122703 171 ntBASIC1.75□□□□□ -2.13
Col18a1P39061 Gm23783-201ENSMUST00000157941 102 ntBASIC1.75□□□□□ -2.13
Col18a1P39061 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.74□□□□□ -2.13
Col18a1P39061 Gm26089-201ENSMUST00000157898 107 ntBASIC1.74□□□□□ -2.13
Col18a1P39061 Gm22203-201ENSMUST00000158605 58 ntBASIC1.74□□□□□ -2.13
Col18a1P39061 Gm20477-201ENSMUST00000174028 280 ntBASIC1.74□□□□□ -2.13
Col18a1P39061 Mir7217-201ENSMUST00000200304 62 ntBASIC1.74□□□□□ -2.13
Col18a1P39061 Gm43907-201ENSMUST00000203128 117 ntBASIC1.74□□□□□ -2.13
Col18a1P39061 Mir423-201ENSMUST00000083584 109 ntBASIC1.74□□□□□ -2.13
Col18a1P39061 Gm25423-201ENSMUST00000157609 107 ntBASIC1.73□□□□□ -2.13
Col18a1P39061 Gm23500-201ENSMUST00000157735 98 ntBASIC1.73□□□□□ -2.13
Col18a1P39061 Gm22100-201ENSMUST00000157926 63 ntBASIC1.73□□□□□ -2.13
Col18a1P39061 Gm23033-201ENSMUST00000157996 134 ntBASIC1.73□□□□□ -2.13
Col18a1P39061 Snora75-201ENSMUST00000082903 133 ntBASIC1.73□□□□□ -2.13
Col18a1P39061 Gm22788-201ENSMUST00000157876 61 ntBASIC1.72□□□□□ -2.13
Col18a1P39061 Gm26007-201ENSMUST00000158798 120 ntBASIC1.72□□□□□ -2.13
Col18a1P39061 Mir6995-201ENSMUST00000183658 71 ntBASIC1.72□□□□□ -2.13
Col18a1P39061 Gm25974-201ENSMUST00000158701 94 ntBASIC1.71□□□□□ -2.14
Col18a1P39061 Mir7231-201ENSMUST00000196252 61 ntBASIC1.71□□□□□ -2.14
Col18a1P39061 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Col18a1P39061 Gm23893-201ENSMUST00000158106 134 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 Gm25222-201ENSMUST00000158199 126 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 Gm24366-201ENSMUST00000175383 86 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 Gm22802-201ENSMUST00000175621 89 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.7□□□□□ -2.14
Col18a1P39061 Gm25087-201ENSMUST00000101992 78 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 Gm23991-201ENSMUST00000117033 93 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 Gm3724-201ENSMUST00000197957 349 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 Gm25788-201ENSMUST00000082721 131 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 Gm26467-201ENSMUST00000097257 78 ntBASIC1.7□□□□□ -2.14
Col18a1P39061 Gm23180-201ENSMUST00000158686 125 ntBASIC1.69□□□□□ -2.14
Col18a1P39061 Gm22914-201ENSMUST00000175195 77 ntBASIC1.69□□□□□ -2.14
Col18a1P39061 Gm25996-201ENSMUST00000175393 117 ntBASIC1.69□□□□□ -2.14
Col18a1P39061 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
Col18a1P39061 Gm24580-201ENSMUST00000103965 131 ntBASIC1.68□□□□□ -2.14
Col18a1P39061 Gm22593-201ENSMUST00000104245 109 ntBASIC1.68□□□□□ -2.14
Col18a1P39061 Snord2-201ENSMUST00000157899 69 ntBASIC1.68□□□□□ -2.14
Col18a1P39061 Gm23208-201ENSMUST00000158666 127 ntBASIC1.68□□□□□ -2.14
Col18a1P39061 Gm10548-202ENSMUST00000165672 272 ntBASIC1.68□□□□□ -2.14
Col18a1P39061 Gm24710-201ENSMUST00000175235 101 ntBASIC1.68□□□□□ -2.14
Col18a1P39061 Gm24135-201ENSMUST00000179085 101 ntBASIC1.68□□□□□ -2.14
Col18a1P39061 Gm44469-201ENSMUST00000198558 79 ntBASIC1.68□□□□□ -2.14
Col18a1P39061 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Col18a1P39061 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Col18a1P39061 Gm36956-201ENSMUST00000193830 214 ntBASIC1.67□□□□□ -2.14
Col18a1P39061 Mir30d-201ENSMUST00000083503 82 ntBASIC1.67□□□□□ -2.14
Col18a1P39061 Gm26154-201ENSMUST00000102339 96 ntBASIC1.67□□□□□ -2.14
Col18a1P39061 Mir216b-201ENSMUST00000102363 86 ntBASIC1.67□□□□□ -2.14
Col18a1P39061 Mir5104-201ENSMUST00000175319 94 ntBASIC1.67□□□□□ -2.14
Col18a1P39061 Mir3108-201ENSMUST00000175500 79 ntBASIC1.67□□□□□ -2.14
Col18a1P39061 Mir3057-201ENSMUST00000175040 91 ntBASIC1.66□□□□□ -2.14
Col18a1P39061 Mir376b-201ENSMUST00000195930 82 ntBASIC1.66□□□□□ -2.14
Col18a1P39061 Gm22595-201ENSMUST00000104250 130 ntBASIC1.65□□□□□ -2.14
Col18a1P39061 Gm24290-201ENSMUST00000157634 96 ntBASIC1.65□□□□□ -2.14
Col18a1P39061 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.65□□□□□ -2.14
Col18a1P39061 Gm25802-201ENSMUST00000082639 77 ntBASIC1.65□□□□□ -2.14
Col18a1P39061 Gm22403-201ENSMUST00000174919 84 ntBASIC1.64□□□□□ -2.15
Col18a1P39061 Gm25693-201ENSMUST00000175443 85 ntBASIC1.64□□□□□ -2.15
Col18a1P39061 Mir6381-201ENSMUST00000183426 87 ntBASIC1.64□□□□□ -2.15
Col18a1P39061 Gm27937-201ENSMUST00000183605 88 ntBASIC1.64□□□□□ -2.15
Col18a1P39061 Gm22431-201ENSMUST00000158545 107 ntBASIC1.64□□□□□ -2.15
Col18a1P39061 Gm37557-201ENSMUST00000191640 139 ntBASIC1.64□□□□□ -2.15
Col18a1P39061 Gm24049-201ENSMUST00000102409 100 ntBASIC1.63□□□□□ -2.15
Col18a1P39061 Gm22030-201ENSMUST00000116942 63 ntBASIC1.63□□□□□ -2.15
Col18a1P39061 Gm22016-201ENSMUST00000158793 114 ntBASIC1.63□□□□□ -2.15
Col18a1P39061 Gm26491-201ENSMUST00000179268 121 ntBASIC1.63□□□□□ -2.15
Col18a1P39061 Gm26052-201ENSMUST00000104646 84 ntBASIC1.62□□□□□ -2.15
Col18a1P39061 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Col18a1P39061 Gm22786-201ENSMUST00000104086 122 ntBASIC1.62□□□□□ -2.15
Col18a1P39061 Gm23955-201ENSMUST00000157214 100 ntBASIC1.62□□□□□ -2.15
Col18a1P39061 Gm24915-201ENSMUST00000157288 78 ntBASIC1.62□□□□□ -2.15
Col18a1P39061 Gm22809-201ENSMUST00000082743 156 ntBASIC1.62□□□□□ -2.15
Col18a1P39061 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
Col18a1P39061 Gm25110-201ENSMUST00000116684 121 ntBASIC1.61□□□□□ -2.15
Col18a1P39061 Gm25775-201ENSMUST00000116716 121 ntBASIC1.61□□□□□ -2.15
Col18a1P39061 Gm24795-201ENSMUST00000116737 121 ntBASIC1.61□□□□□ -2.15
Col18a1P39061 Gm25171-201ENSMUST00000116926 121 ntBASIC1.61□□□□□ -2.15
Col18a1P39061 Gm22862-201ENSMUST00000178593 121 ntBASIC1.61□□□□□ -2.15
Col18a1P39061 Gm22746-201ENSMUST00000082494 107 ntBASIC1.61□□□□□ -2.15
Col18a1P39061 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Col18a1P39061 Gm23036-201ENSMUST00000157885 99 ntBASIC1.6□□□□□ -2.15
Col18a1P39061 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.6□□□□□ -2.15
Col18a1P39061 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.6□□□□□ -2.15
Col18a1P39061 Gm24151-201ENSMUST00000082758 141 ntBASIC1.6□□□□□ -2.15
Col18a1P39061 Mir3071-201ENSMUST00000093621 80 ntBASIC1.6□□□□□ -2.15
Col18a1P39061 Mir3096-201ENSMUST00000116685 71 ntBASIC1.59□□□□□ -2.16
Col18a1P39061 Gm22541-201ENSMUST00000158165 127 ntBASIC1.59□□□□□ -2.16
Col18a1P39061 Gm27993-201ENSMUST00000184362 85 ntBASIC1.59□□□□□ -2.16
Col18a1P39061 Gm22459-201ENSMUST00000082577 108 ntBASIC1.59□□□□□ -2.16
Col18a1P39061 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.58□□□□□ -2.16
Col18a1P39061 Gm25166-201ENSMUST00000158909 111 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 175.1 ms