Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm24108-201ENSMUST00000175495 77 ntBASIC-1.08□□□□□ -2.58
Sdc1P18828 Gm23726-201ENSMUST00000178937 67 ntBASIC-1.08□□□□□ -2.58
Sdc1P18828 Mir7043-201ENSMUST00000184219 70 ntBASIC-1.08□□□□□ -2.58
Sdc1P18828 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.08□□□□□ -2.58
Sdc1P18828 Mir509-201ENSMUST00000196089 75 ntBASIC-1.08□□□□□ -2.58
Sdc1P18828 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.08□□□□□ -2.58
Sdc1P18828 Gm25879-201ENSMUST00000104330 107 ntBASIC-1.1□□□□□ -2.59
Sdc1P18828 Gm26478-201ENSMUST00000122611 133 ntBASIC-1.1□□□□□ -2.59
Sdc1P18828 Gm27977-201ENSMUST00000185159 111 ntBASIC-1.1□□□□□ -2.59
Sdc1P18828 Gm24704-201ENSMUST00000093715 107 ntBASIC-1.1□□□□□ -2.59
Sdc1P18828 Gm26156-201ENSMUST00000116999 123 ntBASIC-1.11□□□□□ -2.59
Sdc1P18828 Gm25716-201ENSMUST00000158628 104 ntBASIC-1.11□□□□□ -2.59
Sdc1P18828 Gm22503-201ENSMUST00000158983 115 ntBASIC-1.11□□□□□ -2.59
Sdc1P18828 Gm24971-201ENSMUST00000175581 110 ntBASIC-1.11□□□□□ -2.59
Sdc1P18828 Mir6961-201ENSMUST00000183874 67 ntBASIC-1.11□□□□□ -2.59
Sdc1P18828 CT030166.3-201ENSMUST00000223203 193 ntBASIC-1.11□□□□□ -2.59
Sdc1P18828 Gm24064-201ENSMUST00000157486 106 ntBASIC-1.12□□□□□ -2.59
Sdc1P18828 Gm8034-201ENSMUST00000178853 132 ntBASIC-1.12□□□□□ -2.59
Sdc1P18828 Gm22638-201ENSMUST00000179674 107 ntBASIC-1.12□□□□□ -2.59
Sdc1P18828 Gm42677-201ENSMUST00000196363 127 ntBASIC-1.12□□□□□ -2.59
Sdc1P18828 Gm22708-201ENSMUST00000158987 103 ntBASIC-1.13□□□□□ -2.59
Sdc1P18828 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-1.13□□□□□ -2.59
Sdc1P18828 Snord80-201ENSMUST00000083801 81 ntBASIC-1.13□□□□□ -2.59
Sdc1P18828 Gm23209-201ENSMUST00000158667 110 ntBASIC-1.14□□□□□ -2.59
Sdc1P18828 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-1.14□□□□□ -2.59
Sdc1P18828 Gm24614-201ENSMUST00000083269 107 ntBASIC-1.14□□□□□ -2.59
Sdc1P18828 Gm23072-201ENSMUST00000158243 123 ntBASIC-1.15□□□□□ -2.59
Sdc1P18828 Mir6375-201ENSMUST00000197176 95 ntBASIC-1.15□□□□□ -2.59
Sdc1P18828 AC157602.1-201ENSMUST00000197446 105 ntBASIC-1.15□□□□□ -2.59
Sdc1P18828 Gm18502-201ENSMUST00000218679 199 ntBASIC-1.15□□□□□ -2.59
Sdc1P18828 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-1.15□□□□□ -2.59
Sdc1P18828 Mir302c-201ENSMUST00000083548 68 ntBASIC-1.15□□□□□ -2.59
Sdc1P18828 Gm24580-201ENSMUST00000103965 131 ntBASIC-1.16□□□□□ -2.6
Sdc1P18828 Gm22772-201ENSMUST00000104451 121 ntBASIC-1.16□□□□□ -2.6
Sdc1P18828 Gm25599-201ENSMUST00000157816 103 ntBASIC-1.16□□□□□ -2.6
Sdc1P18828 AC154832.1-201ENSMUST00000228928 141 ntBASIC-1.16□□□□□ -2.6
Sdc1P18828 Mir23a-201ENSMUST00000083677 75 ntBASIC-1.16□□□□□ -2.6
Sdc1P18828 Gm23528-201ENSMUST00000104571 132 ntBASIC-1.17□□□□□ -2.6
Sdc1P18828 Gm27851-201ENSMUST00000183529 63 ntBASIC-1.17□□□□□ -2.6
Sdc1P18828 Gm19248-201ENSMUST00000209404 110 ntBASIC-1.17□□□□□ -2.6
Sdc1P18828 Gm23500-201ENSMUST00000157735 98 ntBASIC-1.18□□□□□ -2.6
Sdc1P18828 Gm27332-201ENSMUST00000184893 112 ntBASIC-1.18□□□□□ -2.6
Sdc1P18828 Gm23904-201ENSMUST00000157567 124 ntBASIC-1.19□□□□□ -2.6
Sdc1P18828 Gm23494-201ENSMUST00000116830 126 ntBASIC-1.2□□□□□ -2.6
Sdc1P18828 Gm26456-201ENSMUST00000082831 111 ntBASIC-1.2□□□□□ -2.6
Sdc1P18828 Mir369-201ENSMUST00000083627 79 ntBASIC-1.2□□□□□ -2.6
Sdc1P18828 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-1.21□□□□□ -2.6
Sdc1P18828 Gm42773-201ENSMUST00000196962 148 ntBASIC-1.21□□□□□ -2.6
Sdc1P18828 Gm23722-201ENSMUST00000083002 130 ntBASIC-1.21□□□□□ -2.6
Sdc1P18828 Gm24918-201ENSMUST00000083022 130 ntBASIC-1.21□□□□□ -2.6
Sdc1P18828 Gm23384-201ENSMUST00000158593 103 ntBASIC-1.22□□□□□ -2.6
Sdc1P18828 Gm26498-201ENSMUST00000177799 79 ntBASIC-1.22□□□□□ -2.6
Sdc1P18828 Gm26230-201ENSMUST00000180141 79 ntBASIC-1.22□□□□□ -2.6
Sdc1P18828 Gm26054-201ENSMUST00000083037 107 ntBASIC-1.22□□□□□ -2.6
Sdc1P18828 Mir669b-201ENSMUST00000102172 97 ntBASIC-1.23□□□□□ -2.61
Sdc1P18828 Gm24697-201ENSMUST00000083881 107 ntBASIC-1.23□□□□□ -2.61
Sdc1P18828 Gm23990-201ENSMUST00000117031 117 ntBASIC-1.24□□□□□ -2.61
Sdc1P18828 Gm44909-201ENSMUST00000208756 165 ntBASIC-1.24□□□□□ -2.61
Sdc1P18828 Gm23199-201ENSMUST00000158812 107 ntBASIC-1.25□□□□□ -2.61
Sdc1P18828 Gm27784-201ENSMUST00000184926 113 ntBASIC-1.25□□□□□ -2.61
Sdc1P18828 Mir7057-201ENSMUST00000184685 58 ntBASIC-1.26□□□□□ -2.61
Sdc1P18828 Gm29344-201ENSMUST00000068143 210 ntBASIC-1.26□□□□□ -2.61
Sdc1P18828 Gm22196-201ENSMUST00000116865 109 ntBASIC-1.27□□□□□ -2.61
Sdc1P18828 Gm37832-201ENSMUST00000118935 189 ntBASIC-1.27□□□□□ -2.61
Sdc1P18828 Gm25370-201ENSMUST00000158159 94 ntBASIC-1.27□□□□□ -2.61
Sdc1P18828 Gm26291-201ENSMUST00000158889 137 ntBASIC-1.27□□□□□ -2.61
Sdc1P18828 Gm23970-201ENSMUST00000083319 107 ntBASIC-1.27□□□□□ -2.61
Sdc1P18828 Gm24141-201ENSMUST00000122776 115 ntBASIC-1.28□□□□□ -2.61
Sdc1P18828 Gm22013-201ENSMUST00000158788 103 ntBASIC-1.28□□□□□ -2.61
Sdc1P18828 Gm25248-201ENSMUST00000175473 98 ntBASIC-1.28□□□□□ -2.61
Sdc1P18828 AC151902.2-201ENSMUST00000226419 301 ntBASIC-1.28□□□□□ -2.61
Sdc1P18828 n-R5s153-201ENSMUST00000083451 116 ntBASIC-1.28□□□□□ -2.61
Sdc1P18828 Mir3071-201ENSMUST00000093621 80 ntBASIC-1.28□□□□□ -2.61
Sdc1P18828 Mir669o-201ENSMUST00000103898 96 ntBASIC-1.29□□□□□ -2.62
Sdc1P18828 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC-1.29□□□□□ -2.62
Sdc1P18828 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
Sdc1P18828 Gm22258-201ENSMUST00000177645 94 ntBASIC-1.3□□□□□ -2.62
Sdc1P18828 Gm26032-201ENSMUST00000178535 94 ntBASIC-1.3□□□□□ -2.62
Sdc1P18828 Gm25210-201ENSMUST00000178813 94 ntBASIC-1.3□□□□□ -2.62
Sdc1P18828 Gm25157-201ENSMUST00000178914 94 ntBASIC-1.3□□□□□ -2.62
Sdc1P18828 Gm22046-201ENSMUST00000179027 94 ntBASIC-1.3□□□□□ -2.62
Sdc1P18828 Gm22941-201ENSMUST00000179630 94 ntBASIC-1.3□□□□□ -2.62
Sdc1P18828 Gm25471-201ENSMUST00000180126 94 ntBASIC-1.3□□□□□ -2.62
Sdc1P18828 Mirlet7b-201ENSMUST00000083630 85 ntBASIC-1.3□□□□□ -2.62
Sdc1P18828 Gm24717-201ENSMUST00000157522 124 ntBASIC-1.31□□□□□ -2.62
Sdc1P18828 Gm25712-201ENSMUST00000158634 93 ntBASIC-1.31□□□□□ -2.62
Sdc1P18828 Mir7673-201ENSMUST00000184567 64 ntBASIC-1.31□□□□□ -2.62
Sdc1P18828 Mir669l-201ENSMUST00000103771 98 ntBASIC-1.32□□□□□ -2.62
Sdc1P18828 Gm23166-201ENSMUST00000157164 101 ntBASIC-1.32□□□□□ -2.62
Sdc1P18828 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.32□□□□□ -2.62
Sdc1P18828 Gm25870-201ENSMUST00000179845 79 ntBASIC-1.32□□□□□ -2.62
Sdc1P18828 Mir6957-201ENSMUST00000183708 64 ntBASIC-1.32□□□□□ -2.62
Sdc1P18828 Gm44853-201ENSMUST00000209070 250 ntBASIC-1.32□□□□□ -2.62
Sdc1P18828 mt-Tn-201ENSMUST00000082399 71 ntBASIC-1.32□□□□□ -2.62
Sdc1P18828 Gm23613-201ENSMUST00000082596 87 ntBASIC-1.32□□□□□ -2.62
Sdc1P18828 Gm22305-201ENSMUST00000082690 108 ntBASIC-1.32□□□□□ -2.62
Sdc1P18828 Gm25887-201ENSMUST00000157777 84 ntBASIC-1.33□□□□□ -2.62
Sdc1P18828 Gm23216-201ENSMUST00000179545 107 ntBASIC-1.33□□□□□ -2.62
Sdc1P18828 Gm25623-201ENSMUST00000157216 108 ntBASIC-1.34□□□□□ -2.62
Sdc1P18828 Gm23308-201ENSMUST00000179475 107 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 76,532 protein–RNA pairs in 149.8 ms