Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm26096-201ENSMUST00000179084 79 ntBASIC1.01□□□□□ -2.25
Col3a1P08121 Gm44469-201ENSMUST00000198558 79 ntBASIC1.01□□□□□ -2.25
Col3a1P08121 Gm43927-201ENSMUST00000204599 117 ntBASIC1.01□□□□□ -2.25
Col3a1P08121 Gm26202-201ENSMUST00000082910 65 ntBASIC1.01□□□□□ -2.25
Col3a1P08121 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
Col3a1P08121 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Col3a1P08121 Gm23785-201ENSMUST00000116741 96 ntBASIC1□□□□□ -2.25
Col3a1P08121 Gm25541-201ENSMUST00000116888 126 ntBASIC1□□□□□ -2.25
Col3a1P08121 Gm11966-201ENSMUST00000119907 87 ntBASIC1□□□□□ -2.25
Col3a1P08121 Gm24009-201ENSMUST00000157734 93 ntBASIC1□□□□□ -2.25
Col3a1P08121 Gm38295-201ENSMUST00000191951 151 ntBASIC1□□□□□ -2.25
Col3a1P08121 AC147560.1-201ENSMUST00000197528 107 ntBASIC1□□□□□ -2.25
Col3a1P08121 Gm23735-201ENSMUST00000082551 134 ntBASIC1□□□□□ -2.25
Col3a1P08121 Gm23170-201ENSMUST00000157158 106 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm26485-201ENSMUST00000158019 64 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm23857-201ENSMUST00000158379 111 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm24229-201ENSMUST00000158830 118 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Mir6390-201ENSMUST00000184405 129 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm44948-201ENSMUST00000209050 149 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Snord1a-201ENSMUST00000083160 74 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm24555-201ENSMUST00000104548 124 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm22048-201ENSMUST00000104721 89 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm24378-201ENSMUST00000122699 106 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm24467-201ENSMUST00000157887 126 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm26158-201ENSMUST00000158973 119 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm10548-202ENSMUST00000165672 272 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Gm23726-201ENSMUST00000178937 67 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Mir7675-201ENSMUST00000184262 58 ntBASIC0.99□□□□□ -2.25
Col3a1P08121 Mir653-201ENSMUST00000102402 85 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 Gm25609-201ENSMUST00000104019 104 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 Gm25619-201ENSMUST00000122621 104 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 Gm25964-201ENSMUST00000157171 97 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 Gm25622-201ENSMUST00000157217 104 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 Gm25056-201ENSMUST00000157372 62 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 Gm26038-201ENSMUST00000158151 106 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 Gm25600-201ENSMUST00000158357 106 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 Gm24547-201ENSMUST00000158649 149 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.98□□□□□ -2.25
Col3a1P08121 AC158537.2-201ENSMUST00000223575 150 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 Gm24208-201ENSMUST00000082783 135 ntBASIC0.98□□□□□ -2.25
Col3a1P08121 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.97□□□□□ -2.25
Col3a1P08121 Gm24381-201ENSMUST00000122697 104 ntBASIC0.97□□□□□ -2.25
Col3a1P08121 Gm22801-201ENSMUST00000175624 84 ntBASIC0.97□□□□□ -2.25
Col3a1P08121 Gm36956-201ENSMUST00000193830 214 ntBASIC0.97□□□□□ -2.25
Col3a1P08121 Mir468-201ENSMUST00000197332 78 ntBASIC0.97□□□□□ -2.25
Col3a1P08121 Gm25991-201ENSMUST00000102439 99 ntBASIC0.96□□□□□ -2.26
Col3a1P08121 Gm24915-201ENSMUST00000157288 78 ntBASIC0.96□□□□□ -2.26
Col3a1P08121 Gm22559-201ENSMUST00000157329 134 ntBASIC0.96□□□□□ -2.26
Col3a1P08121 Gm24476-201ENSMUST00000157437 131 ntBASIC0.96□□□□□ -2.26
Col3a1P08121 Gm25974-201ENSMUST00000158701 94 ntBASIC0.96□□□□□ -2.26
Col3a1P08121 Gm24202-201ENSMUST00000082948 103 ntBASIC0.96□□□□□ -2.26
Col3a1P08121 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
Col3a1P08121 Mir709-201ENSMUST00000102190 88 ntBASIC0.95□□□□□ -2.26
Col3a1P08121 Gm25663-201ENSMUST00000157698 135 ntBASIC0.95□□□□□ -2.26
Col3a1P08121 Gm22413-201ENSMUST00000175465 85 ntBASIC0.95□□□□□ -2.26
Col3a1P08121 Gm23306-201ENSMUST00000179058 105 ntBASIC0.95□□□□□ -2.26
Col3a1P08121 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
Col3a1P08121 Gm24311-201ENSMUST00000082570 104 ntBASIC0.95□□□□□ -2.26
Col3a1P08121 Gm22753-201ENSMUST00000083657 107 ntBASIC0.95□□□□□ -2.26
Col3a1P08121 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Col3a1P08121 Gm22689-201ENSMUST00000102452 110 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Gm25110-201ENSMUST00000116684 121 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Gm25775-201ENSMUST00000116716 121 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Gm24795-201ENSMUST00000116737 121 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Gm25171-201ENSMUST00000116926 121 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Gm24290-201ENSMUST00000157634 96 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Gm25375-201ENSMUST00000158157 135 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Gm23477-201ENSMUST00000158882 128 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Gm23291-201ENSMUST00000175611 78 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Gm27993-201ENSMUST00000184362 85 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Gm44488-201ENSMUST00000199467 119 ntBASIC0.94□□□□□ -2.26
Col3a1P08121 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Col3a1P08121 Gm22030-201ENSMUST00000116942 63 ntBASIC0.93□□□□□ -2.26
Col3a1P08121 Gm11857-201ENSMUST00000119817 324 ntBASIC0.93□□□□□ -2.26
Col3a1P08121 Gm22788-201ENSMUST00000157876 61 ntBASIC0.93□□□□□ -2.26
Col3a1P08121 Gm26359-201ENSMUST00000158873 101 ntBASIC0.93□□□□□ -2.26
Col3a1P08121 Gm25693-201ENSMUST00000175443 85 ntBASIC0.93□□□□□ -2.26
Col3a1P08121 Gm27711-201ENSMUST00000183802 118 ntBASIC0.93□□□□□ -2.26
Col3a1P08121 Mir324-201ENSMUST00000083600 89 ntBASIC0.93□□□□□ -2.26
Col3a1P08121 Gm24494-201ENSMUST00000083804 81 ntBASIC0.93□□□□□ -2.26
Col3a1P08121 Gm25759-201ENSMUST00000103988 129 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Gm25756-201ENSMUST00000103990 136 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Gm23321-201ENSMUST00000104465 126 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Col3a1P08121 Gm24777-201ENSMUST00000157644 107 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Gm23180-201ENSMUST00000158686 125 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Gm24221-201ENSMUST00000158833 313 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Mir216b-201ENSMUST00000102363 86 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Mir669f-201ENSMUST00000103850 121 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Gm22785-201ENSMUST00000104087 132 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Mir1961-201ENSMUST00000158643 112 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Mir3064-201ENSMUST00000175532 67 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Col3a1P08121 Gm43907-201ENSMUST00000203128 117 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Mir141-201ENSMUST00000083540 72 ntBASIC0.92□□□□□ -2.26
Col3a1P08121 Gm23114-201ENSMUST00000158478 117 ntBASIC0.91□□□□□ -2.26
Col3a1P08121 Gm22663-201ENSMUST00000158721 102 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 134.3 ms