Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Gm24842-201ENSMUST00000158681 54 ntBASIC-0.84□□□□□ -2.54
Trbv12-1A0A0B4J1H0 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0.84□□□□□ -2.54
Trbv12-1A0A0B4J1H0 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.85□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Mir183-201ENSMUST00000083685 70 ntBASIC-0.85□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm25410-201ENSMUST00000083758 137 ntBASIC-0.85□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.86□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm25887-201ENSMUST00000157777 84 ntBASIC-0.86□□□□□ -2.55
Trbv12-1A0A0B4J1H0 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.86□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.87□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm24064-201ENSMUST00000157486 106 ntBASIC-0.87□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm23500-201ENSMUST00000157735 98 ntBASIC-0.87□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm24877-201ENSMUST00000158779 116 ntBASIC-0.87□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm43749-201ENSMUST00000199345 352 ntBASIC-0.87□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm25081-201ENSMUST00000082534 108 ntBASIC-0.87□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm24263-201ENSMUST00000104059 107 ntBASIC-0.88□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.88□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.88□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.88□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.88□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm25370-201ENSMUST00000158159 94 ntBASIC-0.89□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.89□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm23507-201ENSMUST00000083078 107 ntBASIC-0.89□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Snord70-201ENSMUST00000104157 87 ntBASIC-0.9□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.9□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm45429-201ENSMUST00000209527 172 ntBASIC-0.9□□□□□ -2.55
Trbv12-1A0A0B4J1H0 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.91□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.91□□□□□ -2.56
Trbv12-1A0A0B4J1H0 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.91□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm25137-201ENSMUST00000083251 110 ntBASIC-0.91□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm25316-201ENSMUST00000116826 118 ntBASIC-0.92□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm37796-201ENSMUST00000195327 134 ntBASIC-0.92□□□□□ -2.56
Trbv12-1A0A0B4J1H0 mt-Tn-201ENSMUST00000082399 71 ntBASIC-0.92□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Snord78-201ENSMUST00000104032 66 ntBASIC-0.93□□□□□ -2.56
Trbv12-1A0A0B4J1H0 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.93□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm23528-201ENSMUST00000104571 132 ntBASIC-0.93□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.93□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm22319-201ENSMUST00000157147 122 ntBASIC-0.93□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm22558-201ENSMUST00000157326 95 ntBASIC-0.93□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.93□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm25978-201ENSMUST00000158698 90 ntBASIC-0.93□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.93□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-0.94□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Snord64-201ENSMUST00000104003 67 ntBASIC-0.94□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm22349-201ENSMUST00000157864 107 ntBASIC-0.94□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm24947-201ENSMUST00000158334 110 ntBASIC-0.94□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.94□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.94□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.94□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm43324-201ENSMUST00000197482 289 ntBASIC-0.95□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm43977-201ENSMUST00000203970 189 ntBASIC-0.95□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.95□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm27928-201ENSMUST00000183747 256 ntBASIC-0.96□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.96□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Mir96-201ENSMUST00000083652 106 ntBASIC-0.96□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm24697-201ENSMUST00000083881 107 ntBASIC-0.96□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm24449-201ENSMUST00000083985 106 ntBASIC-0.96□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.97□□□□□ -2.56
Trbv12-1A0A0B4J1H0 Gm25889-201ENSMUST00000157775 107 ntBASIC-0.98□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.98□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Gm26018-201ENSMUST00000104406 128 ntBASIC-0.99□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.99□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Gm25653-201ENSMUST00000158473 138 ntBASIC-0.99□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.99□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Gm24468-201ENSMUST00000104489 104 ntBASIC-1□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Snord72-201ENSMUST00000104549 81 ntBASIC-1□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Mir378c-201ENSMUST00000184478 99 ntBASIC-1□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Gm26207-201ENSMUST00000082909 104 ntBASIC-1□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Gm24580-201ENSMUST00000103965 131 ntBASIC-1.01□□□□□ -2.57
Trbv12-1A0A0B4J1H0 AC167019.1-201ENSMUST00000227913 106 ntBASIC-1.02□□□□□ -2.57
Trbv12-1A0A0B4J1H0 mt-Tt-201ENSMUST00000082422 67 ntBASIC-1.02□□□□□ -2.57
Trbv12-1A0A0B4J1H0 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.03□□□□□ -2.57
Trbv12-1A0A0B4J1H0 Gm22157-201ENSMUST00000158410 104 ntBASIC-1.04□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm23726-201ENSMUST00000178937 67 ntBASIC-1.04□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm38298-201ENSMUST00000193578 118 ntBASIC-1.04□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm44470-201ENSMUST00000203913 142 ntBASIC-1.04□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm25943-201ENSMUST00000103791 90 ntBASIC-1.05□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Mir466b-7-201ENSMUST00000103804 88 ntBASIC-1.05□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Mir466b-5-201ENSMUST00000103900 88 ntBASIC-1.05□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Mir466b-4-201ENSMUST00000178801 90 ntBASIC-1.05□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm25285-201ENSMUST00000178951 90 ntBASIC-1.05□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Mir466b-6-201ENSMUST00000180061 90 ntBASIC-1.05□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Mir466c-2-201ENSMUST00000180211 90 ntBASIC-1.05□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm22732-201ENSMUST00000158093 121 ntBASIC-1.06□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-1.06□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm12086-201ENSMUST00000120863 228 ntBASIC-1.07□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm24381-201ENSMUST00000122697 104 ntBASIC-1.07□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm44353-201ENSMUST00000200618 138 ntBASIC-1.07□□□□□ -2.58
Trbv12-1A0A0B4J1H0 AC165138.1-201ENSMUST00000226984 270 ntBASIC-1.07□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm24590-201ENSMUST00000116699 119 ntBASIC-1.08□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm25622-201ENSMUST00000157217 104 ntBASIC-1.08□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm26337-201ENSMUST00000178000 79 ntBASIC-1.08□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm22031-201ENSMUST00000116945 126 ntBASIC-1.09□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm25425-201ENSMUST00000157611 96 ntBASIC-1.09□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm26291-201ENSMUST00000158889 137 ntBASIC-1.09□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Mir6237-201ENSMUST00000183808 91 ntBASIC-1.09□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Snora62-201ENSMUST00000082991 149 ntBASIC-1.09□□□□□ -2.58
Trbv12-1A0A0B4J1H0 Gm23651-201ENSMUST00000116755 120 ntBASIC-1.1□□□□□ -2.59
Trbv12-1A0A0B4J1H0 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-1.1□□□□□ -2.59
Trbv12-1A0A0B4J1H0 Gm44322-201ENSMUST00000196830 115 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 76,532 protein–RNA pairs in 139 ms