Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm22544-201ENSMUST00000104349 127 ntBASIC1.15□□□□□ -2.23
Ushbp1Q8R370 Gm22466-201ENSMUST00000175278 69 ntBASIC1.15□□□□□ -2.23
Ushbp1Q8R370 Mir3079-201ENSMUST00000175428 90 ntBASIC1.15□□□□□ -2.23
Ushbp1Q8R370 Mir6237-201ENSMUST00000183808 91 ntBASIC1.15□□□□□ -2.23
Ushbp1Q8R370 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Ushbp1Q8R370 Gm24777-201ENSMUST00000157644 107 ntBASIC1.14□□□□□ -2.23
Ushbp1Q8R370 Gm24399-201ENSMUST00000157869 74 ntBASIC1.14□□□□□ -2.23
Ushbp1Q8R370 Gm25600-201ENSMUST00000158357 106 ntBASIC1.14□□□□□ -2.23
Ushbp1Q8R370 Gm25014-201ENSMUST00000158401 103 ntBASIC1.14□□□□□ -2.23
Ushbp1Q8R370 Gm22429-201ENSMUST00000158553 130 ntBASIC1.14□□□□□ -2.23
Ushbp1Q8R370 Gm24549-201ENSMUST00000158647 139 ntBASIC1.14□□□□□ -2.23
Ushbp1Q8R370 Gm25693-201ENSMUST00000175443 85 ntBASIC1.14□□□□□ -2.23
Ushbp1Q8R370 Gm38323-201ENSMUST00000192450 210 ntBASIC1.14□□□□□ -2.23
Ushbp1Q8R370 mt-Tn-201ENSMUST00000082399 71 ntBASIC1.14□□□□□ -2.23
Ushbp1Q8R370 Mir22-201ENSMUST00000083595 95 ntBASIC1.14□□□□□ -2.23
Ushbp1Q8R370 Gm24431-201ENSMUST00000104073 66 ntBASIC1.13□□□□□ -2.23
Ushbp1Q8R370 Gm23661-201ENSMUST00000122630 87 ntBASIC1.13□□□□□ -2.23
Ushbp1Q8R370 Gm23900-201ENSMUST00000157569 108 ntBASIC1.13□□□□□ -2.23
Ushbp1Q8R370 Gm23917-201ENSMUST00000175256 98 ntBASIC1.13□□□□□ -2.23
Ushbp1Q8R370 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.13□□□□□ -2.23
Ushbp1Q8R370 Mir500-201ENSMUST00000093600 92 ntBASIC1.13□□□□□ -2.23
Ushbp1Q8R370 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC1.12□□□□□ -2.23
Ushbp1Q8R370 Gm26133-201ENSMUST00000157363 100 ntBASIC1.12□□□□□ -2.23
Ushbp1Q8R370 Gm25056-201ENSMUST00000157372 62 ntBASIC1.12□□□□□ -2.23
Ushbp1Q8R370 Gm24290-201ENSMUST00000157634 96 ntBASIC1.12□□□□□ -2.23
Ushbp1Q8R370 Gm24129-201ENSMUST00000158537 97 ntBASIC1.12□□□□□ -2.23
Ushbp1Q8R370 Gm23301-201ENSMUST00000082713 65 ntBASIC1.12□□□□□ -2.23
Ushbp1Q8R370 Gm24527-201ENSMUST00000082920 107 ntBASIC1.12□□□□□ -2.23
Ushbp1Q8R370 Gm23790-201ENSMUST00000083013 107 ntBASIC1.12□□□□□ -2.23
Ushbp1Q8R370 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.12□□□□□ -2.23
Ushbp1Q8R370 Snord69-201ENSMUST00000104024 80 ntBASIC1.11□□□□□ -2.23
Ushbp1Q8R370 Gm23261-201ENSMUST00000158316 136 ntBASIC1.11□□□□□ -2.23
Ushbp1Q8R370 Gm27645-201ENSMUST00000183348 77 ntBASIC1.11□□□□□ -2.23
Ushbp1Q8R370 Snord35a-201ENSMUST00000083884 90 ntBASIC1.11□□□□□ -2.23
Ushbp1Q8R370 Gm22212-201ENSMUST00000158096 106 ntBASIC1.1□□□□□ -2.23
Ushbp1Q8R370 Mir15a-201ENSMUST00000175266 84 ntBASIC1.1□□□□□ -2.23
Ushbp1Q8R370 Gm27974-201ENSMUST00000183415 105 ntBASIC1.1□□□□□ -2.23
Ushbp1Q8R370 DQ267101-201ENSMUST00000082562 73 ntBASIC1.1□□□□□ -2.23
Ushbp1Q8R370 Mir101a-201ENSMUST00000083517 83 ntBASIC1.1□□□□□ -2.23
Ushbp1Q8R370 Gm22672-201ENSMUST00000104414 134 ntBASIC1.09□□□□□ -2.23
Ushbp1Q8R370 Gm6272-201ENSMUST00000121256 171 ntBASIC1.09□□□□□ -2.23
Ushbp1Q8R370 Gm25974-201ENSMUST00000158701 94 ntBASIC1.09□□□□□ -2.23
Ushbp1Q8R370 Gm26466-201ENSMUST00000179615 79 ntBASIC1.09□□□□□ -2.23
Ushbp1Q8R370 Gm24020-201ENSMUST00000180156 108 ntBASIC1.09□□□□□ -2.23
Ushbp1Q8R370 Mir6380-201ENSMUST00000184334 81 ntBASIC1.09□□□□□ -2.23
Ushbp1Q8R370 Gm27607-201ENSMUST00000185162 122 ntBASIC1.09□□□□□ -2.23
Ushbp1Q8R370 Gm22030-201ENSMUST00000116942 63 ntBASIC1.08□□□□□ -2.24
Ushbp1Q8R370 Gm24009-201ENSMUST00000157734 93 ntBASIC1.08□□□□□ -2.24
Ushbp1Q8R370 Gm24772-201ENSMUST00000158507 110 ntBASIC1.08□□□□□ -2.24
Ushbp1Q8R370 Gm24801-201ENSMUST00000178503 105 ntBASIC1.08□□□□□ -2.24
Ushbp1Q8R370 Mir219b-201ENSMUST00000198317 65 ntBASIC1.08□□□□□ -2.24
Ushbp1Q8R370 Mir33-201ENSMUST00000083531 69 ntBASIC1.08□□□□□ -2.24
Ushbp1Q8R370 Gm22786-201ENSMUST00000104086 122 ntBASIC1.07□□□□□ -2.24
Ushbp1Q8R370 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC1.07□□□□□ -2.24
Ushbp1Q8R370 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.07□□□□□ -2.24
Ushbp1Q8R370 Gm26202-201ENSMUST00000082910 65 ntBASIC1.07□□□□□ -2.24
Ushbp1Q8R370 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Ushbp1Q8R370 Gm24686-201ENSMUST00000157755 93 ntBASIC1.06□□□□□ -2.24
Ushbp1Q8R370 Mir100-201ENSMUST00000175270 80 ntBASIC1.06□□□□□ -2.24
Ushbp1Q8R370 Gm27297-201ENSMUST00000183395 105 ntBASIC1.06□□□□□ -2.24
Ushbp1Q8R370 Gm38274-201ENSMUST00000195689 148 ntBASIC1.06□□□□□ -2.24
Ushbp1Q8R370 Gm25683-201ENSMUST00000083940 131 ntBASIC1.06□□□□□ -2.24
Ushbp1Q8R370 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.05□□□□□ -2.24
Ushbp1Q8R370 Gm6985-201ENSMUST00000121255 271 ntBASIC1.05□□□□□ -2.24
Ushbp1Q8R370 Gm22431-201ENSMUST00000158545 107 ntBASIC1.05□□□□□ -2.24
Ushbp1Q8R370 Gm25449-201ENSMUST00000179389 79 ntBASIC1.05□□□□□ -2.24
Ushbp1Q8R370 Gm24920-201ENSMUST00000083018 85 ntBASIC1.05□□□□□ -2.24
Ushbp1Q8R370 Gm22251-201ENSMUST00000083216 107 ntBASIC1.05□□□□□ -2.24
Ushbp1Q8R370 Snord32a-201ENSMUST00000083285 83 ntBASIC1.05□□□□□ -2.24
Ushbp1Q8R370 Gm23321-201ENSMUST00000104465 126 ntBASIC1.04□□□□□ -2.24
Ushbp1Q8R370 Gm23853-201ENSMUST00000158375 104 ntBASIC1.04□□□□□ -2.24
Ushbp1Q8R370 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm13577-201ENSMUST00000121365 205 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm24648-201ENSMUST00000157111 132 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm22729-201ENSMUST00000158088 129 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm22541-201ENSMUST00000158165 127 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm24500-201ENSMUST00000158447 124 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm23416-201ENSMUST00000175520 95 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Mir5619-201ENSMUST00000176065 61 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm38295-201ENSMUST00000191951 151 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm44301-201ENSMUST00000200362 143 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm44932-201ENSMUST00000206799 121 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm23038-201ENSMUST00000083873 104 ntBASIC1.03□□□□□ -2.24
Ushbp1Q8R370 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.02□□□□□ -2.25
Ushbp1Q8R370 Gm23349-201ENSMUST00000158432 98 ntBASIC1.02□□□□□ -2.25
Ushbp1Q8R370 Mir6342-201ENSMUST00000183870 125 ntBASIC1.02□□□□□ -2.25
Ushbp1Q8R370 Gm44211-201ENSMUST00000204867 145 ntBASIC1.02□□□□□ -2.25
Ushbp1Q8R370 Mir377-201ENSMUST00000083504 68 ntBASIC1.02□□□□□ -2.25
Ushbp1Q8R370 Gm25497-201ENSMUST00000104425 132 ntBASIC1.01□□□□□ -2.25
Ushbp1Q8R370 Gm25138-201ENSMUST00000083248 136 ntBASIC1.01□□□□□ -2.25
Ushbp1Q8R370 Gm25022-201ENSMUST00000102205 83 ntBASIC1□□□□□ -2.25
Ushbp1Q8R370 Gm22788-201ENSMUST00000157876 61 ntBASIC1□□□□□ -2.25
Ushbp1Q8R370 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1□□□□□ -2.25
Ushbp1Q8R370 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1□□□□□ -2.25
Ushbp1Q8R370 Gm25633-201ENSMUST00000178565 107 ntBASIC1□□□□□ -2.25
Ushbp1Q8R370 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1□□□□□ -2.25
Ushbp1Q8R370 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1□□□□□ -2.25
Ushbp1Q8R370 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1□□□□□ -2.25
Ushbp1Q8R370 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 1894.7 ms