Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm26158-201ENSMUST00000158973 119 ntBASIC1.8□□□□□ -2.12
Usp40Q8BWR4 Gm22802-201ENSMUST00000175621 89 ntBASIC1.8□□□□□ -2.12
Usp40Q8BWR4 Gm26202-201ENSMUST00000082910 65 ntBASIC1.8□□□□□ -2.12
Usp40Q8BWR4 Mir211-201ENSMUST00000083651 106 ntBASIC1.8□□□□□ -2.12
Usp40Q8BWR4 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Usp40Q8BWR4 Gm24895-201ENSMUST00000122742 74 ntBASIC1.79□□□□□ -2.12
Usp40Q8BWR4 U6.1-201ENSMUST00000157443 101 ntBASIC1.79□□□□□ -2.12
Usp40Q8BWR4 Mir3061-201ENSMUST00000175129 91 ntBASIC1.79□□□□□ -2.12
Usp40Q8BWR4 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.78□□□□□ -2.12
Usp40Q8BWR4 Mir3096-201ENSMUST00000116685 71 ntBASIC1.78□□□□□ -2.12
Usp40Q8BWR4 Gm25056-201ENSMUST00000157372 62 ntBASIC1.78□□□□□ -2.12
Usp40Q8BWR4 Gm22914-201ENSMUST00000175195 77 ntBASIC1.78□□□□□ -2.12
Usp40Q8BWR4 Gm24154-201ENSMUST00000175261 130 ntBASIC1.78□□□□□ -2.12
Usp40Q8BWR4 Gm27511-201ENSMUST00000183502 127 ntBASIC1.78□□□□□ -2.12
Usp40Q8BWR4 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Usp40Q8BWR4 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.78□□□□□ -2.12
Usp40Q8BWR4 Gm24165-201ENSMUST00000082718 128 ntBASIC1.78□□□□□ -2.12
Usp40Q8BWR4 Gm23100-201ENSMUST00000083455 141 ntBASIC1.78□□□□□ -2.12
Usp40Q8BWR4 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Usp40Q8BWR4 Gm22780-201ENSMUST00000104084 132 ntBASIC1.77□□□□□ -2.13
Usp40Q8BWR4 Gm24379-201ENSMUST00000122695 86 ntBASIC1.77□□□□□ -2.13
Usp40Q8BWR4 Gm25600-201ENSMUST00000158357 106 ntBASIC1.77□□□□□ -2.13
Usp40Q8BWR4 Gm23857-201ENSMUST00000158379 111 ntBASIC1.77□□□□□ -2.13
Usp40Q8BWR4 Gm23636-201ENSMUST00000175070 95 ntBASIC1.77□□□□□ -2.13
Usp40Q8BWR4 Gm27549-201ENSMUST00000183508 62 ntBASIC1.77□□□□□ -2.13
Usp40Q8BWR4 Gm24129-201ENSMUST00000158537 97 ntBASIC1.76□□□□□ -2.13
Usp40Q8BWR4 Gm22203-201ENSMUST00000158605 58 ntBASIC1.76□□□□□ -2.13
Usp40Q8BWR4 Gm24547-201ENSMUST00000158649 149 ntBASIC1.76□□□□□ -2.13
Usp40Q8BWR4 Gm24134-201ENSMUST00000083361 71 ntBASIC1.76□□□□□ -2.13
Usp40Q8BWR4 Mir223-201ENSMUST00000102112 110 ntBASIC1.75□□□□□ -2.13
Usp40Q8BWR4 Mir216b-201ENSMUST00000102363 86 ntBASIC1.75□□□□□ -2.13
Usp40Q8BWR4 Mir741-201ENSMUST00000103931 71 ntBASIC1.75□□□□□ -2.13
Usp40Q8BWR4 Gm25183-201ENSMUST00000157752 106 ntBASIC1.75□□□□□ -2.13
Usp40Q8BWR4 Mir8116-201ENSMUST00000184134 97 ntBASIC1.75□□□□□ -2.13
Usp40Q8BWR4 Mir7059-201ENSMUST00000184825 59 ntBASIC1.75□□□□□ -2.13
Usp40Q8BWR4 Gm24252-201ENSMUST00000083700 132 ntBASIC1.75□□□□□ -2.13
Usp40Q8BWR4 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.75□□□□□ -2.13
Usp40Q8BWR4 Gm25991-201ENSMUST00000102439 99 ntBASIC1.74□□□□□ -2.13
Usp40Q8BWR4 Gm10548-202ENSMUST00000165672 272 ntBASIC1.74□□□□□ -2.13
Usp40Q8BWR4 Gm25035-201ENSMUST00000175414 77 ntBASIC1.74□□□□□ -2.13
Usp40Q8BWR4 Gm23649-201ENSMUST00000179007 107 ntBASIC1.74□□□□□ -2.13
Usp40Q8BWR4 Gm27297-201ENSMUST00000183395 105 ntBASIC1.74□□□□□ -2.13
Usp40Q8BWR4 Gm27517-201ENSMUST00000184347 236 ntBASIC1.74□□□□□ -2.13
Usp40Q8BWR4 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Usp40Q8BWR4 Gm24202-201ENSMUST00000082948 103 ntBASIC1.74□□□□□ -2.13
Usp40Q8BWR4 Gm12432-201ENSMUST00000119540 186 ntBASIC1.73□□□□□ -2.13
Usp40Q8BWR4 Gm6985-201ENSMUST00000121255 271 ntBASIC1.73□□□□□ -2.13
Usp40Q8BWR4 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.73□□□□□ -2.13
Usp40Q8BWR4 Gm23106-201ENSMUST00000157554 101 ntBASIC1.73□□□□□ -2.13
Usp40Q8BWR4 Gm24229-201ENSMUST00000158830 118 ntBASIC1.73□□□□□ -2.13
Usp40Q8BWR4 Gm24311-201ENSMUST00000082570 104 ntBASIC1.73□□□□□ -2.13
Usp40Q8BWR4 Gm22809-201ENSMUST00000082743 156 ntBASIC1.73□□□□□ -2.13
Usp40Q8BWR4 Gm24208-201ENSMUST00000082783 135 ntBASIC1.73□□□□□ -2.13
Usp40Q8BWR4 Snord45b-201ENSMUST00000082797 71 ntBASIC1.73□□□□□ -2.13
Usp40Q8BWR4 Gm24983-201ENSMUST00000104457 69 ntBASIC1.72□□□□□ -2.13
Usp40Q8BWR4 Gm22039-201ENSMUST00000157278 132 ntBASIC1.72□□□□□ -2.13
Usp40Q8BWR4 Gm24725-201ENSMUST00000158229 125 ntBASIC1.72□□□□□ -2.13
Usp40Q8BWR4 Gm23291-201ENSMUST00000175611 78 ntBASIC1.72□□□□□ -2.13
Usp40Q8BWR4 Mir6240-201ENSMUST00000184281 117 ntBASIC1.72□□□□□ -2.13
Usp40Q8BWR4 Mir7052-201ENSMUST00000184821 65 ntBASIC1.72□□□□□ -2.13
Usp40Q8BWR4 Gm45754-201ENSMUST00000212380 279 ntBASIC1.72□□□□□ -2.13
Usp40Q8BWR4 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.72□□□□□ -2.13
Usp40Q8BWR4 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.72□□□□□ -2.13
Usp40Q8BWR4 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.71□□□□□ -2.14
Usp40Q8BWR4 Mir468-201ENSMUST00000197332 78 ntBASIC1.71□□□□□ -2.14
Usp40Q8BWR4 Gm44469-201ENSMUST00000198558 79 ntBASIC1.71□□□□□ -2.14
Usp40Q8BWR4 Gm44948-201ENSMUST00000209050 149 ntBASIC1.71□□□□□ -2.14
Usp40Q8BWR4 Gm24624-201ENSMUST00000082617 164 ntBASIC1.71□□□□□ -2.14
Usp40Q8BWR4 Mir873a-201ENSMUST00000104863 77 ntBASIC1.7□□□□□ -2.14
Usp40Q8BWR4 Gm23329-201ENSMUST00000157415 108 ntBASIC1.7□□□□□ -2.14
Usp40Q8BWR4 Gm24476-201ENSMUST00000157437 131 ntBASIC1.7□□□□□ -2.14
Usp40Q8BWR4 Gm23672-201ENSMUST00000157471 107 ntBASIC1.7□□□□□ -2.14
Usp40Q8BWR4 Gm22078-201ENSMUST00000157593 103 ntBASIC1.7□□□□□ -2.14
Usp40Q8BWR4 Gm44384-201ENSMUST00000200208 114 ntBASIC1.7□□□□□ -2.14
Usp40Q8BWR4 Gm24927-201ENSMUST00000083397 107 ntBASIC1.7□□□□□ -2.14
Usp40Q8BWR4 Mir544-201ENSMUST00000103813 78 ntBASIC1.69□□□□□ -2.14
Usp40Q8BWR4 Gm27450-201ENSMUST00000104632 90 ntBASIC1.69□□□□□ -2.14
Usp40Q8BWR4 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.69□□□□□ -2.14
Usp40Q8BWR4 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Usp40Q8BWR4 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Usp40Q8BWR4 Gm22603-201ENSMUST00000157603 96 ntBASIC1.68□□□□□ -2.14
Usp40Q8BWR4 Gm23072-201ENSMUST00000158243 123 ntBASIC1.68□□□□□ -2.14
Usp40Q8BWR4 Gm25366-201ENSMUST00000158845 124 ntBASIC1.68□□□□□ -2.14
Usp40Q8BWR4 Gm24201-201ENSMUST00000082946 125 ntBASIC1.68□□□□□ -2.14
Usp40Q8BWR4 Mir196b-201ENSMUST00000083509 85 ntBASIC1.68□□□□□ -2.14
Usp40Q8BWR4 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.68□□□□□ -2.14
Usp40Q8BWR4 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm25110-201ENSMUST00000116684 121 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm25775-201ENSMUST00000116716 121 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm24795-201ENSMUST00000116737 121 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm25171-201ENSMUST00000116926 121 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm26257-201ENSMUST00000122500 107 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm24401-201ENSMUST00000157868 91 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm24677-201ENSMUST00000158755 150 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm22862-201ENSMUST00000178593 121 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm44488-201ENSMUST00000199467 119 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm43907-201ENSMUST00000203128 117 ntBASIC1.67□□□□□ -2.14
Usp40Q8BWR4 Gm25650-201ENSMUST00000083784 162 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 215.6 ms