Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Snora26-201ENSMUST00000175614 121 ntBASIC1.53□□□□□ -2.16
Trim56Q80VI1 Gm27894-201ENSMUST00000184177 92 ntBASIC1.53□□□□□ -2.16
Trim56Q80VI1 Gm38323-201ENSMUST00000192450 210 ntBASIC1.53□□□□□ -2.16
Trim56Q80VI1 Gm25644-201ENSMUST00000083209 107 ntBASIC1.53□□□□□ -2.16
Trim56Q80VI1 Gm24593-201ENSMUST00000122507 106 ntBASIC1.52□□□□□ -2.17
Trim56Q80VI1 Gm24290-201ENSMUST00000157634 96 ntBASIC1.52□□□□□ -2.17
Trim56Q80VI1 Gm38295-201ENSMUST00000191951 151 ntBASIC1.52□□□□□ -2.17
Trim56Q80VI1 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.52□□□□□ -2.17
Trim56Q80VI1 Snord69-201ENSMUST00000104024 80 ntBASIC1.51□□□□□ -2.17
Trim56Q80VI1 Gm43038-201ENSMUST00000202359 88 ntBASIC1.51□□□□□ -2.17
Trim56Q80VI1 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Trim56Q80VI1 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.51□□□□□ -2.17
Trim56Q80VI1 Gm25798-201ENSMUST00000082641 107 ntBASIC1.51□□□□□ -2.17
Trim56Q80VI1 Gm25128-201ENSMUST00000083339 76 ntBASIC1.51□□□□□ -2.17
Trim56Q80VI1 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Trim56Q80VI1 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.51□□□□□ -2.17
Trim56Q80VI1 Gm25274-201ENSMUST00000104296 135 ntBASIC1.5□□□□□ -2.17
Trim56Q80VI1 Gm12432-201ENSMUST00000119540 186 ntBASIC1.5□□□□□ -2.17
Trim56Q80VI1 Snord13-201ENSMUST00000157627 104 ntBASIC1.5□□□□□ -2.17
Trim56Q80VI1 Gm24549-201ENSMUST00000158647 139 ntBASIC1.5□□□□□ -2.17
Trim56Q80VI1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trim56Q80VI1 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trim56Q80VI1 Mir216b-201ENSMUST00000102363 86 ntBASIC1.49□□□□□ -2.17
Trim56Q80VI1 Gm24183-201ENSMUST00000122572 93 ntBASIC1.49□□□□□ -2.17
Trim56Q80VI1 Gm22788-201ENSMUST00000157876 61 ntBASIC1.49□□□□□ -2.17
Trim56Q80VI1 Gm28435-201ENSMUST00000185496 108 ntBASIC1.49□□□□□ -2.17
Trim56Q80VI1 Gm29047-201ENSMUST00000189816 108 ntBASIC1.49□□□□□ -2.17
Trim56Q80VI1 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Trim56Q80VI1 Gm24946-201ENSMUST00000158332 106 ntBASIC1.48□□□□□ -2.17
Trim56Q80VI1 Gm24311-201ENSMUST00000082570 104 ntBASIC1.48□□□□□ -2.17
Trim56Q80VI1 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.48□□□□□ -2.17
Trim56Q80VI1 Gm23291-201ENSMUST00000175611 78 ntBASIC1.47□□□□□ -2.17
Trim56Q80VI1 Gm26712-201ENSMUST00000180813 217 ntBASIC1.47□□□□□ -2.17
Trim56Q80VI1 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1.47□□□□□ -2.17
Trim56Q80VI1 Mir6240-201ENSMUST00000184281 117 ntBASIC1.47□□□□□ -2.17
Trim56Q80VI1 Mir6962-201ENSMUST00000199512 63 ntBASIC1.47□□□□□ -2.17
Trim56Q80VI1 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.47□□□□□ -2.17
Trim56Q80VI1 Gm25968-201ENSMUST00000157167 100 ntBASIC1.46□□□□□ -2.18
Trim56Q80VI1 Gm23410-201ENSMUST00000179967 107 ntBASIC1.46□□□□□ -2.18
Trim56Q80VI1 Gm27987-201ENSMUST00000184023 93 ntBASIC1.46□□□□□ -2.18
Trim56Q80VI1 Gm22505-201ENSMUST00000082956 108 ntBASIC1.46□□□□□ -2.18
Trim56Q80VI1 Gm22363-201ENSMUST00000083100 108 ntBASIC1.46□□□□□ -2.18
Trim56Q80VI1 Gm23814-201ENSMUST00000083230 102 ntBASIC1.46□□□□□ -2.18
Trim56Q80VI1 Mir448-201ENSMUST00000083516 112 ntBASIC1.46□□□□□ -2.18
Trim56Q80VI1 Mir500-201ENSMUST00000093600 92 ntBASIC1.46□□□□□ -2.18
Trim56Q80VI1 Gm25170-201ENSMUST00000104191 129 ntBASIC1.45□□□□□ -2.18
Trim56Q80VI1 Gm25542-201ENSMUST00000116889 94 ntBASIC1.45□□□□□ -2.18
Trim56Q80VI1 Gm25322-201ENSMUST00000122556 104 ntBASIC1.45□□□□□ -2.18
Trim56Q80VI1 Gm22559-201ENSMUST00000157329 134 ntBASIC1.45□□□□□ -2.18
Trim56Q80VI1 Gm22458-201ENSMUST00000082576 107 ntBASIC1.45□□□□□ -2.18
Trim56Q80VI1 Gm24202-201ENSMUST00000082948 103 ntBASIC1.45□□□□□ -2.18
Trim56Q80VI1 Gm24162-201ENSMUST00000093665 102 ntBASIC1.45□□□□□ -2.18
Trim56Q80VI1 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Trim56Q80VI1 Gm25416-201ENSMUST00000104221 107 ntBASIC1.44□□□□□ -2.18
Trim56Q80VI1 Gm6272-201ENSMUST00000121256 171 ntBASIC1.44□□□□□ -2.18
Trim56Q80VI1 Gm22233-201ENSMUST00000157464 114 ntBASIC1.44□□□□□ -2.18
Trim56Q80VI1 Gm25868-201ENSMUST00000158253 114 ntBASIC1.44□□□□□ -2.18
Trim56Q80VI1 Mir7052-201ENSMUST00000184821 65 ntBASIC1.44□□□□□ -2.18
Trim56Q80VI1 Gm25854-201ENSMUST00000082792 72 ntBASIC1.44□□□□□ -2.18
Trim56Q80VI1 Mir377-201ENSMUST00000083504 68 ntBASIC1.44□□□□□ -2.18
Trim56Q80VI1 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trim56Q80VI1 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.43□□□□□ -2.18
Trim56Q80VI1 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.43□□□□□ -2.18
Trim56Q80VI1 Gm22983-201ENSMUST00000158308 104 ntBASIC1.43□□□□□ -2.18
Trim56Q80VI1 Mir7059-201ENSMUST00000184825 59 ntBASIC1.43□□□□□ -2.18
Trim56Q80VI1 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.43□□□□□ -2.18
Trim56Q80VI1 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trim56Q80VI1 Mir343-201ENSMUST00000102360 75 ntBASIC1.42□□□□□ -2.18
Trim56Q80VI1 Gm24865-201ENSMUST00000103246 96 ntBASIC1.42□□□□□ -2.18
Trim56Q80VI1 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Trim56Q80VI1 Gm22100-201ENSMUST00000157926 63 ntBASIC1.42□□□□□ -2.18
Trim56Q80VI1 Gm22539-201ENSMUST00000158167 117 ntBASIC1.42□□□□□ -2.18
Trim56Q80VI1 Gm25870-201ENSMUST00000179845 79 ntBASIC1.42□□□□□ -2.18
Trim56Q80VI1 Gm42533-201ENSMUST00000196247 157 ntBASIC1.42□□□□□ -2.18
Trim56Q80VI1 Gm44483-201ENSMUST00000197203 97 ntBASIC1.42□□□□□ -2.18
Trim56Q80VI1 Gm43907-201ENSMUST00000203128 117 ntBASIC1.42□□□□□ -2.18
Trim56Q80VI1 Gm22485-201ENSMUST00000157990 109 ntBASIC1.41□□□□□ -2.18
Trim56Q80VI1 Gm25740-201ENSMUST00000180247 107 ntBASIC1.41□□□□□ -2.18
Trim56Q80VI1 Gm24624-201ENSMUST00000082617 164 ntBASIC1.41□□□□□ -2.18
Trim56Q80VI1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Trim56Q80VI1 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.4□□□□□ -2.18
Trim56Q80VI1 Gm25040-201ENSMUST00000103877 66 ntBASIC1.4□□□□□ -2.19
Trim56Q80VI1 Gm25496-201ENSMUST00000104430 120 ntBASIC1.4□□□□□ -2.19
Trim56Q80VI1 Gm23991-201ENSMUST00000117033 93 ntBASIC1.4□□□□□ -2.19
Trim56Q80VI1 Gm26029-201ENSMUST00000158659 132 ntBASIC1.4□□□□□ -2.19
Trim56Q80VI1 Mir100-201ENSMUST00000175270 80 ntBASIC1.4□□□□□ -2.19
Trim56Q80VI1 Mir3079-201ENSMUST00000175428 90 ntBASIC1.4□□□□□ -2.19
Trim56Q80VI1 Gm24674-201ENSMUST00000179194 104 ntBASIC1.4□□□□□ -2.19
Trim56Q80VI1 Mir376b-201ENSMUST00000195930 82 ntBASIC1.4□□□□□ -2.19
Trim56Q80VI1 Snora75-201ENSMUST00000082903 133 ntBASIC1.4□□□□□ -2.19
Trim56Q80VI1 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trim56Q80VI1 Gm22780-201ENSMUST00000104084 132 ntBASIC1.39□□□□□ -2.19
Trim56Q80VI1 Gm26301-201ENSMUST00000104813 95 ntBASIC1.39□□□□□ -2.19
Trim56Q80VI1 Gm24199-201ENSMUST00000157808 136 ntBASIC1.39□□□□□ -2.19
Trim56Q80VI1 Gm25366-201ENSMUST00000158845 124 ntBASIC1.39□□□□□ -2.19
Trim56Q80VI1 Gm24154-201ENSMUST00000175261 130 ntBASIC1.39□□□□□ -2.19
Trim56Q80VI1 Gm27711-201ENSMUST00000183802 118 ntBASIC1.39□□□□□ -2.19
Trim56Q80VI1 Gm26207-201ENSMUST00000082909 104 ntBASIC1.39□□□□□ -2.19
Trim56Q80VI1 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trim56Q80VI1 Gm25495-201ENSMUST00000104431 131 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 150.7 ms