Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.99□□□□□ -2.25
Ddx55Q6ZPL9 Gm23482-201ENSMUST00000104172 122 ntBASIC0.98□□□□□ -2.25
Ddx55Q6ZPL9 Gm22544-201ENSMUST00000104349 127 ntBASIC0.98□□□□□ -2.25
Ddx55Q6ZPL9 Gm23661-201ENSMUST00000122630 87 ntBASIC0.98□□□□□ -2.25
Ddx55Q6ZPL9 Gm24920-201ENSMUST00000083018 85 ntBASIC0.98□□□□□ -2.25
Ddx55Q6ZPL9 Gm23989-201ENSMUST00000117030 66 ntBASIC0.97□□□□□ -2.25
Ddx55Q6ZPL9 Gm23900-201ENSMUST00000157569 108 ntBASIC0.97□□□□□ -2.25
Ddx55Q6ZPL9 Gm23783-201ENSMUST00000157941 102 ntBASIC0.97□□□□□ -2.25
Ddx55Q6ZPL9 Gm22541-201ENSMUST00000158165 127 ntBASIC0.97□□□□□ -2.25
Ddx55Q6ZPL9 Gm24877-201ENSMUST00000158779 116 ntBASIC0.97□□□□□ -2.25
Ddx55Q6ZPL9 Gm26202-201ENSMUST00000082910 65 ntBASIC0.97□□□□□ -2.25
Ddx55Q6ZPL9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.96□□□□□ -2.26
Ddx55Q6ZPL9 Gm26133-201ENSMUST00000157363 100 ntBASIC0.96□□□□□ -2.26
Ddx55Q6ZPL9 Gm25056-201ENSMUST00000157372 62 ntBASIC0.96□□□□□ -2.26
Ddx55Q6ZPL9 Gm22706-201ENSMUST00000157907 112 ntBASIC0.96□□□□□ -2.26
Ddx55Q6ZPL9 Gm25014-201ENSMUST00000158401 103 ntBASIC0.96□□□□□ -2.26
Ddx55Q6ZPL9 Mir3109-201ENSMUST00000175301 88 ntBASIC0.96□□□□□ -2.26
Ddx55Q6ZPL9 Gm24020-201ENSMUST00000180156 108 ntBASIC0.96□□□□□ -2.26
Ddx55Q6ZPL9 Gm27297-201ENSMUST00000183395 105 ntBASIC0.96□□□□□ -2.26
Ddx55Q6ZPL9 Gm45197-201ENSMUST00000205288 151 ntBASIC0.96□□□□□ -2.26
Ddx55Q6ZPL9 Gm24579-201ENSMUST00000103964 144 ntBASIC0.95□□□□□ -2.26
Ddx55Q6ZPL9 Gm23126-201ENSMUST00000104260 134 ntBASIC0.95□□□□□ -2.26
Ddx55Q6ZPL9 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.95□□□□□ -2.26
Ddx55Q6ZPL9 Gm24009-201ENSMUST00000157734 93 ntBASIC0.95□□□□□ -2.26
Ddx55Q6ZPL9 Gm25974-201ENSMUST00000158701 94 ntBASIC0.95□□□□□ -2.26
Ddx55Q6ZPL9 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC0.95□□□□□ -2.26
Ddx55Q6ZPL9 Mir377-201ENSMUST00000083504 68 ntBASIC0.95□□□□□ -2.26
Ddx55Q6ZPL9 Mir695-201ENSMUST00000102261 109 ntBASIC0.94□□□□□ -2.26
Ddx55Q6ZPL9 Gm22212-201ENSMUST00000158096 106 ntBASIC0.94□□□□□ -2.26
Ddx55Q6ZPL9 Gm24323-201ENSMUST00000175342 77 ntBASIC0.94□□□□□ -2.26
Ddx55Q6ZPL9 Gm24500-201ENSMUST00000158447 124 ntBASIC0.93□□□□□ -2.26
Ddx55Q6ZPL9 Mir6342-201ENSMUST00000183870 125 ntBASIC0.93□□□□□ -2.26
Ddx55Q6ZPL9 Gm25337-201ENSMUST00000083723 104 ntBASIC0.93□□□□□ -2.26
Ddx55Q6ZPL9 Gm26109-201ENSMUST00000083970 70 ntBASIC0.93□□□□□ -2.26
Ddx55Q6ZPL9 Gm23321-201ENSMUST00000104465 126 ntBASIC0.92□□□□□ -2.26
Ddx55Q6ZPL9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Ddx55Q6ZPL9 Gm24399-201ENSMUST00000157869 74 ntBASIC0.92□□□□□ -2.26
Ddx55Q6ZPL9 Mir6364-201ENSMUST00000183396 86 ntBASIC0.92□□□□□ -2.26
Ddx55Q6ZPL9 Mir7079-201ENSMUST00000184697 69 ntBASIC0.92□□□□□ -2.26
Ddx55Q6ZPL9 AC140930.2-201ENSMUST00000221803 109 ntBASIC0.92□□□□□ -2.26
Ddx55Q6ZPL9 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.92□□□□□ -2.26
Ddx55Q6ZPL9 Gm24431-201ENSMUST00000104073 66 ntBASIC0.91□□□□□ -2.26
Ddx55Q6ZPL9 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.91□□□□□ -2.26
Ddx55Q6ZPL9 Mir7010-201ENSMUST00000183464 63 ntBASIC0.91□□□□□ -2.26
Ddx55Q6ZPL9 Gm26338-201ENSMUST00000102372 110 ntBASIC0.9□□□□□ -2.27
Ddx55Q6ZPL9 Gm24678-201ENSMUST00000158756 104 ntBASIC0.9□□□□□ -2.27
Ddx55Q6ZPL9 Gm25161-201ENSMUST00000158913 132 ntBASIC0.9□□□□□ -2.27
Ddx55Q6ZPL9 Gm29535-201ENSMUST00000185723 109 ntBASIC0.9□□□□□ -2.27
Ddx55Q6ZPL9 Gm28143-201ENSMUST00000191082 109 ntBASIC0.9□□□□□ -2.27
Ddx55Q6ZPL9 Mir376b-201ENSMUST00000195930 82 ntBASIC0.9□□□□□ -2.27
Ddx55Q6ZPL9 Gm22431-201ENSMUST00000158545 107 ntBASIC0.89□□□□□ -2.27
Ddx55Q6ZPL9 Gm38274-201ENSMUST00000195689 148 ntBASIC0.89□□□□□ -2.27
Ddx55Q6ZPL9 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.89□□□□□ -2.27
Ddx55Q6ZPL9 Gm25635-201ENSMUST00000082675 131 ntBASIC0.89□□□□□ -2.27
Ddx55Q6ZPL9 Gm25393-201ENSMUST00000157336 285 ntBASIC0.88□□□□□ -2.27
Ddx55Q6ZPL9 Gm23197-201ENSMUST00000158809 112 ntBASIC0.88□□□□□ -2.27
Ddx55Q6ZPL9 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.88□□□□□ -2.27
Ddx55Q6ZPL9 Gm24648-201ENSMUST00000157111 132 ntBASIC0.87□□□□□ -2.27
Ddx55Q6ZPL9 Gm22788-201ENSMUST00000157876 61 ntBASIC0.87□□□□□ -2.27
Ddx55Q6ZPL9 Gm25300-201ENSMUST00000175284 84 ntBASIC0.87□□□□□ -2.27
Ddx55Q6ZPL9 Gm28435-201ENSMUST00000185496 108 ntBASIC0.87□□□□□ -2.27
Ddx55Q6ZPL9 Mir1949-202ENSMUST00000199259 70 ntBASIC0.87□□□□□ -2.27
Ddx55Q6ZPL9 Gm23735-201ENSMUST00000082551 134 ntBASIC0.87□□□□□ -2.27
Ddx55Q6ZPL9 Snora75-201ENSMUST00000082903 133 ntBASIC0.87□□□□□ -2.27
Ddx55Q6ZPL9 Snora2b-201ENSMUST00000084005 137 ntBASIC0.87□□□□□ -2.27
Ddx55Q6ZPL9 Mir362-201ENSMUST00000093592 65 ntBASIC0.87□□□□□ -2.27
Ddx55Q6ZPL9 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.86□□□□□ -2.27
Ddx55Q6ZPL9 Gm22689-201ENSMUST00000102452 110 ntBASIC0.86□□□□□ -2.27
Ddx55Q6ZPL9 Gm6985-201ENSMUST00000121255 271 ntBASIC0.86□□□□□ -2.27
Ddx55Q6ZPL9 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.86□□□□□ -2.27
Ddx55Q6ZPL9 Gm13065-201ENSMUST00000119178 141 ntBASIC0.85□□□□□ -2.27
Ddx55Q6ZPL9 Gm24686-201ENSMUST00000157755 93 ntBASIC0.85□□□□□ -2.27
Ddx55Q6ZPL9 Snord33-201ENSMUST00000083694 84 ntBASIC0.85□□□□□ -2.27
Ddx55Q6ZPL9 Mir216b-201ENSMUST00000102363 86 ntBASIC0.84□□□□□ -2.27
Ddx55Q6ZPL9 Gm24288-201ENSMUST00000157630 144 ntBASIC0.84□□□□□ -2.27
Ddx55Q6ZPL9 Gm22520-201ENSMUST00000158269 129 ntBASIC0.84□□□□□ -2.27
Ddx55Q6ZPL9 Gm24099-201ENSMUST00000083384 107 ntBASIC0.84□□□□□ -2.27
Ddx55Q6ZPL9 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC0.83□□□□□ -2.28
Ddx55Q6ZPL9 Gm25040-201ENSMUST00000103877 66 ntBASIC0.83□□□□□ -2.28
Ddx55Q6ZPL9 Gm25378-201ENSMUST00000104333 129 ntBASIC0.83□□□□□ -2.28
Ddx55Q6ZPL9 Gm23203-201ENSMUST00000104374 107 ntBASIC0.83□□□□□ -2.28
Ddx55Q6ZPL9 Gm44301-201ENSMUST00000200362 143 ntBASIC0.83□□□□□ -2.28
Ddx55Q6ZPL9 AC160962.3-201ENSMUST00000225914 112 ntBASIC0.83□□□□□ -2.28
Ddx55Q6ZPL9 Gm24208-201ENSMUST00000082783 135 ntBASIC0.83□□□□□ -2.28
Ddx55Q6ZPL9 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.83□□□□□ -2.28
Ddx55Q6ZPL9 Gm26253-201ENSMUST00000122493 103 ntBASIC0.82□□□□□ -2.28
Ddx55Q6ZPL9 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.82□□□□□ -2.28
Ddx55Q6ZPL9 Mir6237-201ENSMUST00000183808 91 ntBASIC0.82□□□□□ -2.28
Ddx55Q6ZPL9 Gm38295-201ENSMUST00000191951 151 ntBASIC0.82□□□□□ -2.28
Ddx55Q6ZPL9 AC166341.8-201ENSMUST00000221267 108 ntBASIC0.82□□□□□ -2.28
Ddx55Q6ZPL9 AC132833.2-201ENSMUST00000228699 157 ntBASIC0.82□□□□□ -2.28
Ddx55Q6ZPL9 Gm27717-201ENSMUST00000183933 151 ntBASIC0.81□□□□□ -2.28
Ddx55Q6ZPL9 Gm22652-201ENSMUST00000083207 131 ntBASIC0.81□□□□□ -2.28
Ddx55Q6ZPL9 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.8□□□□□ -2.28
Ddx55Q6ZPL9 Gm16265-201ENSMUST00000134558 108 ntBASIC0.8□□□□□ -2.28
Ddx55Q6ZPL9 Gm24073-201ENSMUST00000158177 106 ntBASIC0.8□□□□□ -2.28
Ddx55Q6ZPL9 Gm23244-201ENSMUST00000083375 92 ntBASIC0.8□□□□□ -2.28
Ddx55Q6ZPL9 Gm43927-201ENSMUST00000204599 117 ntBASIC0.79□□□□□ -2.28
Ddx55Q6ZPL9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.79□□□□□ -2.28
Ddx55Q6ZPL9 Gm24445-201ENSMUST00000083981 107 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 141.3 ms