Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.67□□□□□ -2.14
Limch1Q3UH68 Gm22030-201ENSMUST00000116942 63 ntBASIC1.67□□□□□ -2.14
Limch1Q3UH68 Gm24895-201ENSMUST00000122742 74 ntBASIC1.67□□□□□ -2.14
Limch1Q3UH68 Gm25936-201ENSMUST00000179952 114 ntBASIC1.67□□□□□ -2.14
Limch1Q3UH68 Gm26712-201ENSMUST00000180813 217 ntBASIC1.67□□□□□ -2.14
Limch1Q3UH68 Mir6962-201ENSMUST00000199512 63 ntBASIC1.67□□□□□ -2.14
Limch1Q3UH68 Gm24271-201ENSMUST00000102327 111 ntBASIC1.66□□□□□ -2.14
Limch1Q3UH68 Gm23130-201ENSMUST00000104252 74 ntBASIC1.66□□□□□ -2.14
Limch1Q3UH68 Gm24290-201ENSMUST00000157634 96 ntBASIC1.66□□□□□ -2.14
Limch1Q3UH68 Mir3968-201ENSMUST00000175355 100 ntBASIC1.66□□□□□ -2.14
Limch1Q3UH68 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Limch1Q3UH68 Gm22522-201ENSMUST00000158271 151 ntBASIC1.65□□□□□ -2.15
Limch1Q3UH68 Mir3098-201ENSMUST00000175416 87 ntBASIC1.65□□□□□ -2.15
Limch1Q3UH68 Gm25693-201ENSMUST00000175443 85 ntBASIC1.65□□□□□ -2.15
Limch1Q3UH68 Gm23301-201ENSMUST00000082713 65 ntBASIC1.65□□□□□ -2.15
Limch1Q3UH68 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.65□□□□□ -2.15
Limch1Q3UH68 Gm24199-201ENSMUST00000157808 136 ntBASIC1.64□□□□□ -2.15
Limch1Q3UH68 Gm27493-201ENSMUST00000184128 78 ntBASIC1.64□□□□□ -2.15
Limch1Q3UH68 Gm26224-201ENSMUST00000082506 80 ntBASIC1.64□□□□□ -2.15
Limch1Q3UH68 Gm23056-201ENSMUST00000082803 111 ntBASIC1.64□□□□□ -2.15
Limch1Q3UH68 Gm22149-201ENSMUST00000104442 136 ntBASIC1.63□□□□□ -2.15
Limch1Q3UH68 Gm25870-201ENSMUST00000179845 79 ntBASIC1.63□□□□□ -2.15
Limch1Q3UH68 Mir6240-201ENSMUST00000184281 117 ntBASIC1.63□□□□□ -2.15
Limch1Q3UH68 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Limch1Q3UH68 Mir216b-201ENSMUST00000102363 86 ntBASIC1.62□□□□□ -2.15
Limch1Q3UH68 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.62□□□□□ -2.15
Limch1Q3UH68 Gm22788-201ENSMUST00000157876 61 ntBASIC1.62□□□□□ -2.15
Limch1Q3UH68 Gm22541-201ENSMUST00000158165 127 ntBASIC1.62□□□□□ -2.15
Limch1Q3UH68 Gm22466-201ENSMUST00000175278 69 ntBASIC1.62□□□□□ -2.15
Limch1Q3UH68 Mir343-201ENSMUST00000102360 75 ntBASIC1.61□□□□□ -2.15
Limch1Q3UH68 Gm25417-201ENSMUST00000104212 131 ntBASIC1.61□□□□□ -2.15
Limch1Q3UH68 Gm24868-201ENSMUST00000157265 136 ntBASIC1.61□□□□□ -2.15
Limch1Q3UH68 Gm24808-201ENSMUST00000157993 118 ntBASIC1.61□□□□□ -2.15
Limch1Q3UH68 Gm24077-201ENSMUST00000158183 136 ntBASIC1.61□□□□□ -2.15
Limch1Q3UH68 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.61□□□□□ -2.15
Limch1Q3UH68 Gm26207-201ENSMUST00000082909 104 ntBASIC1.61□□□□□ -2.15
Limch1Q3UH68 Mir30a-201ENSMUST00000083471 71 ntBASIC1.61□□□□□ -2.15
Limch1Q3UH68 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.6□□□□□ -2.15
Limch1Q3UH68 Gm23291-201ENSMUST00000175611 78 ntBASIC1.6□□□□□ -2.15
Limch1Q3UH68 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.6□□□□□ -2.15
Limch1Q3UH68 Gm24202-201ENSMUST00000082948 103 ntBASIC1.6□□□□□ -2.15
Limch1Q3UH68 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Limch1Q3UH68 Snord69-201ENSMUST00000104024 80 ntBASIC1.59□□□□□ -2.15
Limch1Q3UH68 Gm22673-201ENSMUST00000104415 131 ntBASIC1.59□□□□□ -2.15
Limch1Q3UH68 Gm38323-201ENSMUST00000192450 210 ntBASIC1.59□□□□□ -2.15
Limch1Q3UH68 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Limch1Q3UH68 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.59□□□□□ -2.15
Limch1Q3UH68 Gm23293-201ENSMUST00000082552 104 ntBASIC1.59□□□□□ -2.15
Limch1Q3UH68 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Limch1Q3UH68 Traj60-201ENSMUST00000167781 54 ntBASIC1.58□□□□□ -2.16
Limch1Q3UH68 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Limch1Q3UH68 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.57□□□□□ -2.16
Limch1Q3UH68 Gm23060-201ENSMUST00000102345 109 ntBASIC1.57□□□□□ -2.16
Limch1Q3UH68 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.57□□□□□ -2.16
Limch1Q3UH68 Gm12432-201ENSMUST00000119540 186 ntBASIC1.57□□□□□ -2.16
Limch1Q3UH68 Gm24064-201ENSMUST00000157486 106 ntBASIC1.57□□□□□ -2.16
Limch1Q3UH68 Gm24549-201ENSMUST00000158647 139 ntBASIC1.57□□□□□ -2.16
Limch1Q3UH68 Gm24154-201ENSMUST00000175261 130 ntBASIC1.57□□□□□ -2.16
Limch1Q3UH68 Gm16399-201ENSMUST00000181423 219 ntBASIC1.57□□□□□ -2.16
Limch1Q3UH68 Mir7059-201ENSMUST00000184825 59 ntBASIC1.57□□□□□ -2.16
Limch1Q3UH68 Gm25759-201ENSMUST00000103988 129 ntBASIC1.56□□□□□ -2.16
Limch1Q3UH68 Gm25968-201ENSMUST00000157167 100 ntBASIC1.56□□□□□ -2.16
Limch1Q3UH68 Gm25622-201ENSMUST00000157217 104 ntBASIC1.56□□□□□ -2.16
Limch1Q3UH68 Mir8119-201ENSMUST00000183371 129 ntBASIC1.56□□□□□ -2.16
Limch1Q3UH68 Gm43907-201ENSMUST00000203128 117 ntBASIC1.56□□□□□ -2.16
Limch1Q3UH68 Gm25416-201ENSMUST00000104221 107 ntBASIC1.55□□□□□ -2.16
Limch1Q3UH68 Gm25274-201ENSMUST00000104296 135 ntBASIC1.55□□□□□ -2.16
Limch1Q3UH68 Gm22067-201ENSMUST00000122790 107 ntBASIC1.55□□□□□ -2.16
Limch1Q3UH68 Gm23329-201ENSMUST00000157415 108 ntBASIC1.55□□□□□ -2.16
Limch1Q3UH68 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.55□□□□□ -2.16
Limch1Q3UH68 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.55□□□□□ -2.16
Limch1Q3UH68 Gm24988-201ENSMUST00000104460 121 ntBASIC1.54□□□□□ -2.16
Limch1Q3UH68 Gm23991-201ENSMUST00000117033 93 ntBASIC1.54□□□□□ -2.16
Limch1Q3UH68 Gm24495-201ENSMUST00000178575 79 ntBASIC1.54□□□□□ -2.16
Limch1Q3UH68 Gm22253-201ENSMUST00000179870 79 ntBASIC1.54□□□□□ -2.16
Limch1Q3UH68 Snora75-201ENSMUST00000082903 133 ntBASIC1.54□□□□□ -2.16
Limch1Q3UH68 Mir500-201ENSMUST00000093600 92 ntBASIC1.54□□□□□ -2.16
Limch1Q3UH68 Gm22100-201ENSMUST00000157926 63 ntBASIC1.53□□□□□ -2.16
Limch1Q3UH68 Gm25366-201ENSMUST00000158845 124 ntBASIC1.53□□□□□ -2.16
Limch1Q3UH68 Mir7052-201ENSMUST00000184821 65 ntBASIC1.53□□□□□ -2.16
Limch1Q3UH68 Mir377-201ENSMUST00000083504 68 ntBASIC1.53□□□□□ -2.16
Limch1Q3UH68 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Limch1Q3UH68 Gm26301-201ENSMUST00000104813 95 ntBASIC1.52□□□□□ -2.17
Limch1Q3UH68 Snord13-201ENSMUST00000157627 104 ntBASIC1.52□□□□□ -2.17
Limch1Q3UH68 Gm25128-201ENSMUST00000083339 76 ntBASIC1.52□□□□□ -2.17
Limch1Q3UH68 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Limch1Q3UH68 Gm6272-201ENSMUST00000121256 171 ntBASIC1.51□□□□□ -2.17
Limch1Q3UH68 Gm24311-201ENSMUST00000082570 104 ntBASIC1.51□□□□□ -2.17
Limch1Q3UH68 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Limch1Q3UH68 Gm22780-201ENSMUST00000104084 132 ntBASIC1.5□□□□□ -2.17
Limch1Q3UH68 Gm22786-201ENSMUST00000104086 122 ntBASIC1.5□□□□□ -2.17
Limch1Q3UH68 Gm22559-201ENSMUST00000157329 134 ntBASIC1.5□□□□□ -2.17
Limch1Q3UH68 Mir100-201ENSMUST00000175270 80 ntBASIC1.5□□□□□ -2.17
Limch1Q3UH68 Gm23570-201ENSMUST00000083029 104 ntBASIC1.5□□□□□ -2.17
Limch1Q3UH68 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Limch1Q3UH68 Gm25040-201ENSMUST00000103877 66 ntBASIC1.49□□□□□ -2.17
Limch1Q3UH68 Gm6985-201ENSMUST00000121255 271 ntBASIC1.49□□□□□ -2.17
Limch1Q3UH68 Gm22233-201ENSMUST00000157464 114 ntBASIC1.49□□□□□ -2.17
Limch1Q3UH68 Gm25868-201ENSMUST00000158253 114 ntBASIC1.49□□□□□ -2.17
Limch1Q3UH68 Gm23636-201ENSMUST00000175070 95 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 133 ms