Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm22732-201ENSMUST00000158093 121 ntBASIC1.23□□□□□ -2.21
Shmt1P50431 Gm26712-201ENSMUST00000180813 217 ntBASIC1.23□□□□□ -2.21
Shmt1P50431 Gm16399-201ENSMUST00000181423 219 ntBASIC1.23□□□□□ -2.21
Shmt1P50431 Gm43944-201ENSMUST00000205220 120 ntBASIC1.23□□□□□ -2.21
Shmt1P50431 Gm25696-201ENSMUST00000082900 105 ntBASIC1.23□□□□□ -2.21
Shmt1P50431 Mir29a-201ENSMUST00000083676 88 ntBASIC1.23□□□□□ -2.21
Shmt1P50431 Gm25274-201ENSMUST00000104296 135 ntBASIC1.22□□□□□ -2.21
Shmt1P50431 Gm22149-201ENSMUST00000104442 136 ntBASIC1.22□□□□□ -2.21
Shmt1P50431 Gm22071-201ENSMUST00000116857 83 ntBASIC1.22□□□□□ -2.21
Shmt1P50431 Gm25056-201ENSMUST00000157372 62 ntBASIC1.22□□□□□ -2.21
Shmt1P50431 Gm25768-201ENSMUST00000158570 98 ntBASIC1.22□□□□□ -2.21
Shmt1P50431 Gm25693-201ENSMUST00000175443 85 ntBASIC1.22□□□□□ -2.21
Shmt1P50431 Gm22069-201ENSMUST00000179911 107 ntBASIC1.22□□□□□ -2.21
Shmt1P50431 Gm27711-201ENSMUST00000183802 118 ntBASIC1.22□□□□□ -2.21
Shmt1P50431 Mir5117-201ENSMUST00000083226 84 ntBASIC1.22□□□□□ -2.21
Shmt1P50431 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Shmt1P50431 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Shmt1P50431 Mir466l-201ENSMUST00000104866 121 ntBASIC1.21□□□□□ -2.22
Shmt1P50431 Gm22030-201ENSMUST00000116942 63 ntBASIC1.21□□□□□ -2.22
Shmt1P50431 Gm26478-201ENSMUST00000122611 133 ntBASIC1.21□□□□□ -2.22
Shmt1P50431 Gm24290-201ENSMUST00000157634 96 ntBASIC1.21□□□□□ -2.22
Shmt1P50431 Gm25382-201ENSMUST00000157811 97 ntBASIC1.21□□□□□ -2.22
Shmt1P50431 Mir509-201ENSMUST00000196089 75 ntBASIC1.21□□□□□ -2.22
Shmt1P50431 Gm43927-201ENSMUST00000204599 117 ntBASIC1.21□□□□□ -2.22
Shmt1P50431 Gm25061-201ENSMUST00000104665 107 ntBASIC1.2□□□□□ -2.22
Shmt1P50431 Gm25968-201ENSMUST00000157167 100 ntBASIC1.2□□□□□ -2.22
Shmt1P50431 Gm24942-201ENSMUST00000158328 114 ntBASIC1.2□□□□□ -2.22
Shmt1P50431 Gm22663-201ENSMUST00000158721 102 ntBASIC1.2□□□□□ -2.22
Shmt1P50431 Mir8119-201ENSMUST00000183371 129 ntBASIC1.2□□□□□ -2.22
Shmt1P50431 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.2□□□□□ -2.22
Shmt1P50431 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Shmt1P50431 Gm24271-201ENSMUST00000102327 111 ntBASIC1.19□□□□□ -2.22
Shmt1P50431 Snord69-201ENSMUST00000104024 80 ntBASIC1.19□□□□□ -2.22
Shmt1P50431 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.19□□□□□ -2.22
Shmt1P50431 Gm22466-201ENSMUST00000175278 69 ntBASIC1.19□□□□□ -2.22
Shmt1P50431 Gm27656-201ENSMUST00000185055 80 ntBASIC1.19□□□□□ -2.22
Shmt1P50431 Gm22980-201ENSMUST00000082608 70 ntBASIC1.19□□□□□ -2.22
Shmt1P50431 Gm24208-201ENSMUST00000082783 135 ntBASIC1.19□□□□□ -2.22
Shmt1P50431 Mir216b-201ENSMUST00000102363 86 ntBASIC1.18□□□□□ -2.22
Shmt1P50431 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Shmt1P50431 Gm25715-201ENSMUST00000158627 125 ntBASIC1.18□□□□□ -2.22
Shmt1P50431 Mir1954-201ENSMUST00000175595 86 ntBASIC1.18□□□□□ -2.22
Shmt1P50431 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.18□□□□□ -2.22
Shmt1P50431 Gm23301-201ENSMUST00000082713 65 ntBASIC1.18□□□□□ -2.22
Shmt1P50431 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.18□□□□□ -2.22
Shmt1P50431 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Shmt1P50431 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.17□□□□□ -2.22
Shmt1P50431 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Shmt1P50431 Gm25170-201ENSMUST00000104191 129 ntBASIC1.17□□□□□ -2.22
Shmt1P50431 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Shmt1P50431 Gm38323-201ENSMUST00000192450 210 ntBASIC1.17□□□□□ -2.22
Shmt1P50431 Gm24311-201ENSMUST00000082570 104 ntBASIC1.17□□□□□ -2.22
Shmt1P50431 Gm22458-201ENSMUST00000082576 107 ntBASIC1.17□□□□□ -2.22
Shmt1P50431 Gm23245-201ENSMUST00000083370 135 ntBASIC1.17□□□□□ -2.22
Shmt1P50431 Mir30a-201ENSMUST00000083471 71 ntBASIC1.17□□□□□ -2.22
Shmt1P50431 Mir500-201ENSMUST00000093600 92 ntBASIC1.17□□□□□ -2.22
Shmt1P50431 Gm22788-201ENSMUST00000157876 61 ntBASIC1.16□□□□□ -2.22
Shmt1P50431 Gm24549-201ENSMUST00000158647 139 ntBASIC1.16□□□□□ -2.22
Shmt1P50431 Gm23340-201ENSMUST00000158955 123 ntBASIC1.16□□□□□ -2.22
Shmt1P50431 Mir6381-201ENSMUST00000183426 87 ntBASIC1.16□□□□□ -2.22
Shmt1P50431 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1.16□□□□□ -2.22
Shmt1P50431 Gm24203-201ENSMUST00000082949 114 ntBASIC1.16□□□□□ -2.22
Shmt1P50431 Gm25322-201ENSMUST00000122556 104 ntBASIC1.15□□□□□ -2.23
Shmt1P50431 Gm22233-201ENSMUST00000157464 114 ntBASIC1.15□□□□□ -2.23
Shmt1P50431 Gm22541-201ENSMUST00000158165 127 ntBASIC1.15□□□□□ -2.23
Shmt1P50431 Gm25868-201ENSMUST00000158253 114 ntBASIC1.15□□□□□ -2.23
Shmt1P50431 Snora26-201ENSMUST00000175614 121 ntBASIC1.15□□□□□ -2.23
Shmt1P50431 Mir7663-201ENSMUST00000183950 61 ntBASIC1.15□□□□□ -2.23
Shmt1P50431 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.15□□□□□ -2.23
Shmt1P50431 Gm25644-201ENSMUST00000083209 107 ntBASIC1.15□□□□□ -2.23
Shmt1P50431 Mir448-201ENSMUST00000083516 112 ntBASIC1.15□□□□□ -2.23
Shmt1P50431 Gm24162-201ENSMUST00000093665 102 ntBASIC1.15□□□□□ -2.23
Shmt1P50431 Gm24593-201ENSMUST00000122507 106 ntBASIC1.14□□□□□ -2.23
Shmt1P50431 Gm23715-201ENSMUST00000157354 106 ntBASIC1.14□□□□□ -2.23
Shmt1P50431 Mir1950-201ENSMUST00000158526 74 ntBASIC1.14□□□□□ -2.23
Shmt1P50431 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Shmt1P50431 Gm23410-201ENSMUST00000179967 107 ntBASIC1.14□□□□□ -2.23
Shmt1P50431 Gm22505-201ENSMUST00000082956 108 ntBASIC1.14□□□□□ -2.23
Shmt1P50431 Gm22363-201ENSMUST00000083100 108 ntBASIC1.14□□□□□ -2.23
Shmt1P50431 Gm23814-201ENSMUST00000083230 102 ntBASIC1.14□□□□□ -2.23
Shmt1P50431 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.13□□□□□ -2.23
Shmt1P50431 Gm22786-201ENSMUST00000104086 122 ntBASIC1.13□□□□□ -2.23
Shmt1P50431 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.13□□□□□ -2.23
Shmt1P50431 Gm22983-201ENSMUST00000158308 104 ntBASIC1.13□□□□□ -2.23
Shmt1P50431 Gm24674-201ENSMUST00000179194 104 ntBASIC1.13□□□□□ -2.23
Shmt1P50431 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.13□□□□□ -2.23
Shmt1P50431 Mir377-201ENSMUST00000083504 68 ntBASIC1.13□□□□□ -2.23
Shmt1P50431 Mir22-201ENSMUST00000083595 95 ntBASIC1.13□□□□□ -2.23
Shmt1P50431 Snord71-201ENSMUST00000104361 85 ntBASIC1.12□□□□□ -2.23
Shmt1P50431 Gm6272-201ENSMUST00000121256 171 ntBASIC1.12□□□□□ -2.23
Shmt1P50431 Gm23291-201ENSMUST00000175611 78 ntBASIC1.12□□□□□ -2.23
Shmt1P50431 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Shmt1P50431 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.11□□□□□ -2.23
Shmt1P50431 Gm25542-201ENSMUST00000116889 94 ntBASIC1.11□□□□□ -2.23
Shmt1P50431 Mir1904-201ENSMUST00000122702 80 ntBASIC1.11□□□□□ -2.23
Shmt1P50431 Gm26363-201ENSMUST00000158866 83 ntBASIC1.11□□□□□ -2.23
Shmt1P50431 Mir100-201ENSMUST00000175270 80 ntBASIC1.11□□□□□ -2.23
Shmt1P50431 Gm25740-201ENSMUST00000180247 107 ntBASIC1.11□□□□□ -2.23
Shmt1P50431 Gm28435-201ENSMUST00000185496 108 ntBASIC1.11□□□□□ -2.23
Shmt1P50431 Gm29047-201ENSMUST00000189816 108 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms