Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Mir200a-201ENSMUST00000083466 90 ntBASIC0.59□□□□□ -2.31
Trim54Q9ERP3 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Trim54Q9ERP3 Gm25915-201ENSMUST00000104265 126 ntBASIC0.58□□□□□ -2.32
Trim54Q9ERP3 Gm23986-201ENSMUST00000157144 63 ntBASIC0.58□□□□□ -2.32
Trim54Q9ERP3 Gm22558-201ENSMUST00000157326 95 ntBASIC0.58□□□□□ -2.32
Trim54Q9ERP3 Mir376b-201ENSMUST00000195930 82 ntBASIC0.58□□□□□ -2.32
Trim54Q9ERP3 Mir802-201ENSMUST00000103258 97 ntBASIC0.57□□□□□ -2.32
Trim54Q9ERP3 Gm24649-201ENSMUST00000157106 134 ntBASIC0.57□□□□□ -2.32
Trim54Q9ERP3 Gm26498-201ENSMUST00000177799 79 ntBASIC0.57□□□□□ -2.32
Trim54Q9ERP3 Gm26230-201ENSMUST00000180141 79 ntBASIC0.57□□□□□ -2.32
Trim54Q9ERP3 Gm27943-201ENSMUST00000184844 116 ntBASIC0.57□□□□□ -2.32
Trim54Q9ERP3 Mir1949-202ENSMUST00000199259 70 ntBASIC0.57□□□□□ -2.32
Trim54Q9ERP3 Snord64-201ENSMUST00000104003 67 ntBASIC0.56□□□□□ -2.32
Trim54Q9ERP3 Gm13065-201ENSMUST00000119178 141 ntBASIC0.56□□□□□ -2.32
Trim54Q9ERP3 Gm25974-201ENSMUST00000158701 94 ntBASIC0.56□□□□□ -2.32
Trim54Q9ERP3 Gm22638-201ENSMUST00000179674 107 ntBASIC0.56□□□□□ -2.32
Trim54Q9ERP3 Gm44602-201ENSMUST00000205948 132 ntBASIC0.56□□□□□ -2.32
Trim54Q9ERP3 Gm25497-201ENSMUST00000104425 132 ntBASIC0.55□□□□□ -2.32
Trim54Q9ERP3 Gm26202-201ENSMUST00000082910 65 ntBASIC0.55□□□□□ -2.32
Trim54Q9ERP3 Gm25006-201ENSMUST00000083813 107 ntBASIC0.55□□□□□ -2.32
Trim54Q9ERP3 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.54□□□□□ -2.32
Trim54Q9ERP3 Gm11694-201ENSMUST00000118637 159 ntBASIC0.54□□□□□ -2.32
Trim54Q9ERP3 Gm27297-201ENSMUST00000183395 105 ntBASIC0.54□□□□□ -2.32
Trim54Q9ERP3 Gm3702-201ENSMUST00000211754 346 ntBASIC0.54□□□□□ -2.32
Trim54Q9ERP3 Gm22302-201ENSMUST00000082657 106 ntBASIC0.54□□□□□ -2.32
Trim54Q9ERP3 Snora75-201ENSMUST00000082903 133 ntBASIC0.54□□□□□ -2.32
Trim54Q9ERP3 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.54□□□□□ -2.32
Trim54Q9ERP3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
Trim54Q9ERP3 Gm23672-201ENSMUST00000157471 107 ntBASIC0.53□□□□□ -2.32
Trim54Q9ERP3 Gm24963-201ENSMUST00000157916 144 ntBASIC0.53□□□□□ -2.32
Trim54Q9ERP3 Gm24321-201ENSMUST00000175348 80 ntBASIC0.53□□□□□ -2.32
Trim54Q9ERP3 Gm25040-201ENSMUST00000103877 66 ntBASIC0.52□□□□□ -2.33
Trim54Q9ERP3 Gm23661-201ENSMUST00000122630 87 ntBASIC0.52□□□□□ -2.33
Trim54Q9ERP3 Gm25056-201ENSMUST00000157372 62 ntBASIC0.52□□□□□ -2.33
Trim54Q9ERP3 Gm23180-201ENSMUST00000158686 125 ntBASIC0.52□□□□□ -2.33
Trim54Q9ERP3 Gm44455-201ENSMUST00000200061 82 ntBASIC0.52□□□□□ -2.33
Trim54Q9ERP3 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
Trim54Q9ERP3 Gm27717-201ENSMUST00000183933 151 ntBASIC0.51□□□□□ -2.33
Trim54Q9ERP3 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
Trim54Q9ERP3 Gm25894-201ENSMUST00000083458 75 ntBASIC0.51□□□□□ -2.33
Trim54Q9ERP3 Mir669f-201ENSMUST00000103850 121 ntBASIC0.5□□□□□ -2.33
Trim54Q9ERP3 Gm23601-201ENSMUST00000157259 131 ntBASIC0.5□□□□□ -2.33
Trim54Q9ERP3 Gm24009-201ENSMUST00000157734 93 ntBASIC0.5□□□□□ -2.33
Trim54Q9ERP3 Gm23351-201ENSMUST00000158427 125 ntBASIC0.5□□□□□ -2.33
Trim54Q9ERP3 Gm22652-201ENSMUST00000083207 131 ntBASIC0.5□□□□□ -2.33
Trim54Q9ERP3 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.5□□□□□ -2.33
Trim54Q9ERP3 Gm22772-201ENSMUST00000104451 121 ntBASIC0.49□□□□□ -2.33
Trim54Q9ERP3 Gm23531-201ENSMUST00000104567 68 ntBASIC0.49□□□□□ -2.33
Trim54Q9ERP3 Gm25393-201ENSMUST00000157336 285 ntBASIC0.49□□□□□ -2.33
Trim54Q9ERP3 Gm24467-201ENSMUST00000157887 126 ntBASIC0.49□□□□□ -2.33
Trim54Q9ERP3 Gm43432-201ENSMUST00000196352 121 ntBASIC0.49□□□□□ -2.33
Trim54Q9ERP3 Mir7229-201ENSMUST00000197062 53 ntBASIC0.49□□□□□ -2.33
Trim54Q9ERP3 Gm45429-201ENSMUST00000209527 172 ntBASIC0.49□□□□□ -2.33
Trim54Q9ERP3 Gm43324-201ENSMUST00000197482 289 ntBASIC0.48□□□□□ -2.33
Trim54Q9ERP3 Gm44457-201ENSMUST00000198109 76 ntBASIC0.48□□□□□ -2.33
Trim54Q9ERP3 Gm45541-201ENSMUST00000210443 54 ntBASIC0.48□□□□□ -2.33
Trim54Q9ERP3 Gm24524-201ENSMUST00000082925 170 ntBASIC0.48□□□□□ -2.33
Trim54Q9ERP3 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.47□□□□□ -2.33
Trim54Q9ERP3 Gm24233-201ENSMUST00000104317 122 ntBASIC0.47□□□□□ -2.33
Trim54Q9ERP3 Gm23654-201ENSMUST00000116758 126 ntBASIC0.47□□□□□ -2.33
Trim54Q9ERP3 Gm26369-201ENSMUST00000157825 100 ntBASIC0.47□□□□□ -2.33
Trim54Q9ERP3 Gm24676-201ENSMUST00000158758 75 ntBASIC0.47□□□□□ -2.33
Trim54Q9ERP3 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Trim54Q9ERP3 Gm26062-201ENSMUST00000083379 107 ntBASIC0.47□□□□□ -2.33
Trim54Q9ERP3 Gm23482-201ENSMUST00000104172 122 ntBASIC0.46□□□□□ -2.34
Trim54Q9ERP3 Gm12086-201ENSMUST00000120863 228 ntBASIC0.46□□□□□ -2.34
Trim54Q9ERP3 Gm22788-201ENSMUST00000157876 61 ntBASIC0.46□□□□□ -2.34
Trim54Q9ERP3 Gm22089-201ENSMUST00000158336 102 ntBASIC0.46□□□□□ -2.34
Trim54Q9ERP3 Gm23384-201ENSMUST00000158593 103 ntBASIC0.46□□□□□ -2.34
Trim54Q9ERP3 Gm25978-201ENSMUST00000158698 90 ntBASIC0.46□□□□□ -2.34
Trim54Q9ERP3 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
Trim54Q9ERP3 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.46□□□□□ -2.34
Trim54Q9ERP3 Gm27980-201ENSMUST00000184094 169 ntBASIC0.46□□□□□ -2.34
Trim54Q9ERP3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.46□□□□□ -2.34
Trim54Q9ERP3 Gm26133-201ENSMUST00000157363 100 ntBASIC0.45□□□□□ -2.34
Trim54Q9ERP3 Gm25425-201ENSMUST00000157611 96 ntBASIC0.45□□□□□ -2.34
Trim54Q9ERP3 Gm23994-201ENSMUST00000158059 88 ntBASIC0.45□□□□□ -2.34
Trim54Q9ERP3 Gm23507-201ENSMUST00000083078 107 ntBASIC0.45□□□□□ -2.34
Trim54Q9ERP3 Gm24278-201ENSMUST00000104239 127 ntBASIC0.44□□□□□ -2.34
Trim54Q9ERP3 Mir1197-201ENSMUST00000117037 120 ntBASIC0.44□□□□□ -2.34
Trim54Q9ERP3 Gm28270-201ENSMUST00000188550 109 ntBASIC0.44□□□□□ -2.34
Trim54Q9ERP3 Gm28328-201ENSMUST00000188869 109 ntBASIC0.44□□□□□ -2.34
Trim54Q9ERP3 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.44□□□□□ -2.34
Trim54Q9ERP3 Mir216b-201ENSMUST00000102363 86 ntBASIC0.43□□□□□ -2.34
Trim54Q9ERP3 Gm23900-201ENSMUST00000157569 108 ntBASIC0.43□□□□□ -2.34
Trim54Q9ERP3 Gm23278-201ENSMUST00000157911 143 ntBASIC0.43□□□□□ -2.34
Trim54Q9ERP3 Gm24073-201ENSMUST00000158177 106 ntBASIC0.43□□□□□ -2.34
Trim54Q9ERP3 Gm22983-201ENSMUST00000158308 104 ntBASIC0.43□□□□□ -2.34
Trim54Q9ERP3 Gm22088-201ENSMUST00000158341 117 ntBASIC0.43□□□□□ -2.34
Trim54Q9ERP3 Gm22503-201ENSMUST00000158983 115 ntBASIC0.43□□□□□ -2.34
Trim54Q9ERP3 Mir3105-201ENSMUST00000175480 85 ntBASIC0.43□□□□□ -2.34
Trim54Q9ERP3 Gm25618-201ENSMUST00000179484 107 ntBASIC0.43□□□□□ -2.34
Trim54Q9ERP3 Gm43927-201ENSMUST00000204599 117 ntBASIC0.43□□□□□ -2.34
Trim54Q9ERP3 Gm26303-201ENSMUST00000116845 119 ntBASIC0.42□□□□□ -2.34
Trim54Q9ERP3 Gm25887-201ENSMUST00000157777 84 ntBASIC0.42□□□□□ -2.34
Trim54Q9ERP3 Gm23044-201ENSMUST00000157891 100 ntBASIC0.42□□□□□ -2.34
Trim54Q9ERP3 Gm22239-201ENSMUST00000175220 103 ntBASIC0.42□□□□□ -2.34
Trim54Q9ERP3 Gm25899-201ENSMUST00000082672 141 ntBASIC0.42□□□□□ -2.34
Trim54Q9ERP3 Gm23969-201ENSMUST00000083324 74 ntBASIC0.42□□□□□ -2.34
Trim54Q9ERP3 Gm23434-201ENSMUST00000157179 100 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 145.8 ms