Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm25110-201ENSMUST00000116684 121 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Gm25775-201ENSMUST00000116716 121 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Gm24795-201ENSMUST00000116737 121 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Gm22071-201ENSMUST00000116857 83 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Gm25171-201ENSMUST00000116926 121 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Gm24262-201ENSMUST00000157431 144 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Gm24476-201ENSMUST00000157437 131 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Gm22862-201ENSMUST00000178593 121 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Gm36956-201ENSMUST00000193830 214 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Gm44602-201ENSMUST00000205948 132 ntBASIC1.68□□□□□ -2.14
Trim56Q80VI1 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Trim56Q80VI1 Gm23482-201ENSMUST00000104172 122 ntBASIC1.67□□□□□ -2.14
Trim56Q80VI1 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.67□□□□□ -2.14
Trim56Q80VI1 Gm24915-201ENSMUST00000157288 78 ntBASIC1.67□□□□□ -2.14
Trim56Q80VI1 Gm24637-201ENSMUST00000158674 85 ntBASIC1.67□□□□□ -2.14
Trim56Q80VI1 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.66□□□□□ -2.14
Trim56Q80VI1 Gm25045-201ENSMUST00000122670 99 ntBASIC1.66□□□□□ -2.14
Trim56Q80VI1 Gm22605-201ENSMUST00000158289 108 ntBASIC1.66□□□□□ -2.14
Trim56Q80VI1 Gm23114-201ENSMUST00000158478 117 ntBASIC1.66□□□□□ -2.14
Trim56Q80VI1 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Trim56Q80VI1 Gm28794-201ENSMUST00000185276 136 ntBASIC1.66□□□□□ -2.14
Trim56Q80VI1 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.66□□□□□ -2.14
Trim56Q80VI1 Gm22544-201ENSMUST00000104349 127 ntBASIC1.65□□□□□ -2.15
Trim56Q80VI1 Gm22205-201ENSMUST00000122655 71 ntBASIC1.65□□□□□ -2.15
Trim56Q80VI1 Gm23339-201ENSMUST00000158962 139 ntBASIC1.65□□□□□ -2.15
Trim56Q80VI1 Gm24271-201ENSMUST00000102327 111 ntBASIC1.64□□□□□ -2.15
Trim56Q80VI1 Gm23336-201ENSMUST00000117023 123 ntBASIC1.64□□□□□ -2.15
Trim56Q80VI1 Gm22943-201ENSMUST00000158564 76 ntBASIC1.64□□□□□ -2.15
Trim56Q80VI1 Gm22069-201ENSMUST00000179911 107 ntBASIC1.64□□□□□ -2.15
Trim56Q80VI1 Gm27297-201ENSMUST00000183395 105 ntBASIC1.64□□□□□ -2.15
Trim56Q80VI1 Gm27326-201ENSMUST00000183504 95 ntBASIC1.64□□□□□ -2.15
Trim56Q80VI1 Gm44396-201ENSMUST00000199843 114 ntBASIC1.64□□□□□ -2.15
Trim56Q80VI1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.63□□□□□ -2.15
Trim56Q80VI1 Gm25600-201ENSMUST00000158357 106 ntBASIC1.63□□□□□ -2.15
Trim56Q80VI1 Gm23857-201ENSMUST00000158379 111 ntBASIC1.63□□□□□ -2.15
Trim56Q80VI1 Mir1933-201ENSMUST00000158930 88 ntBASIC1.63□□□□□ -2.15
Trim56Q80VI1 Gm24648-201ENSMUST00000157111 132 ntBASIC1.62□□□□□ -2.15
Trim56Q80VI1 Gm25974-201ENSMUST00000158701 94 ntBASIC1.62□□□□□ -2.15
Trim56Q80VI1 Gm25936-201ENSMUST00000179952 114 ntBASIC1.62□□□□□ -2.15
Trim56Q80VI1 Mir8119-201ENSMUST00000183371 129 ntBASIC1.62□□□□□ -2.15
Trim56Q80VI1 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.62□□□□□ -2.15
Trim56Q80VI1 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.62□□□□□ -2.15
Trim56Q80VI1 Gm43944-201ENSMUST00000205220 120 ntBASIC1.62□□□□□ -2.15
Trim56Q80VI1 Gm44962-201ENSMUST00000206460 279 ntBASIC1.62□□□□□ -2.15
Trim56Q80VI1 Gm3702-201ENSMUST00000211754 346 ntBASIC1.62□□□□□ -2.15
Trim56Q80VI1 Gm24009-201ENSMUST00000157734 93 ntBASIC1.61□□□□□ -2.15
Trim56Q80VI1 Gm26158-201ENSMUST00000158973 119 ntBASIC1.61□□□□□ -2.15
Trim56Q80VI1 Gm22753-201ENSMUST00000083657 107 ntBASIC1.61□□□□□ -2.15
Trim56Q80VI1 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trim56Q80VI1 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.6□□□□□ -2.15
Trim56Q80VI1 Gm23661-201ENSMUST00000122630 87 ntBASIC1.6□□□□□ -2.15
Trim56Q80VI1 Gm23468-201ENSMUST00000157125 108 ntBASIC1.6□□□□□ -2.15
Trim56Q80VI1 Gm24686-201ENSMUST00000157755 93 ntBASIC1.6□□□□□ -2.15
Trim56Q80VI1 Gm27975-201ENSMUST00000184400 101 ntBASIC1.6□□□□□ -2.15
Trim56Q80VI1 Gm44490-201ENSMUST00000198566 127 ntBASIC1.6□□□□□ -2.15
Trim56Q80VI1 Gm25696-201ENSMUST00000082900 105 ntBASIC1.6□□□□□ -2.15
Trim56Q80VI1 Gm26089-201ENSMUST00000157898 107 ntBASIC1.59□□□□□ -2.15
Trim56Q80VI1 Mir1950-201ENSMUST00000158526 74 ntBASIC1.59□□□□□ -2.15
Trim56Q80VI1 Mir7063-201ENSMUST00000184158 91 ntBASIC1.59□□□□□ -2.15
Trim56Q80VI1 Mir5117-201ENSMUST00000083226 84 ntBASIC1.59□□□□□ -2.15
Trim56Q80VI1 Gm22732-201ENSMUST00000158093 121 ntBASIC1.58□□□□□ -2.16
Trim56Q80VI1 Gm44488-201ENSMUST00000199467 119 ntBASIC1.58□□□□□ -2.16
Trim56Q80VI1 Gm26224-201ENSMUST00000082506 80 ntBASIC1.58□□□□□ -2.16
Trim56Q80VI1 Gm23301-201ENSMUST00000082713 65 ntBASIC1.58□□□□□ -2.16
Trim56Q80VI1 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.58□□□□□ -2.16
Trim56Q80VI1 Mir29a-201ENSMUST00000083676 88 ntBASIC1.58□□□□□ -2.16
Trim56Q80VI1 Gm26082-201ENSMUST00000104070 127 ntBASIC1.57□□□□□ -2.16
Trim56Q80VI1 Gm23130-201ENSMUST00000104252 74 ntBASIC1.57□□□□□ -2.16
Trim56Q80VI1 Mir466l-201ENSMUST00000104866 121 ntBASIC1.57□□□□□ -2.16
Trim56Q80VI1 Gm26478-201ENSMUST00000122611 133 ntBASIC1.57□□□□□ -2.16
Trim56Q80VI1 Gm24384-201ENSMUST00000122693 75 ntBASIC1.57□□□□□ -2.16
Trim56Q80VI1 Gm24808-201ENSMUST00000157993 118 ntBASIC1.57□□□□□ -2.16
Trim56Q80VI1 Gm27265-201ENSMUST00000183559 77 ntBASIC1.57□□□□□ -2.16
Trim56Q80VI1 Gm43911-201ENSMUST00000203097 76 ntBASIC1.57□□□□□ -2.16
Trim56Q80VI1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Trim56Q80VI1 Gm23528-201ENSMUST00000104571 132 ntBASIC1.56□□□□□ -2.16
Trim56Q80VI1 Gm25061-201ENSMUST00000104665 107 ntBASIC1.56□□□□□ -2.16
Trim56Q80VI1 Gm22466-201ENSMUST00000175278 69 ntBASIC1.56□□□□□ -2.16
Trim56Q80VI1 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trim56Q80VI1 Mir211-201ENSMUST00000083651 106 ntBASIC1.56□□□□□ -2.16
Trim56Q80VI1 Gm25759-201ENSMUST00000103988 129 ntBASIC1.55□□□□□ -2.16
Trim56Q80VI1 Gm22673-201ENSMUST00000104415 131 ntBASIC1.55□□□□□ -2.16
Trim56Q80VI1 Gm22030-201ENSMUST00000116942 63 ntBASIC1.55□□□□□ -2.16
Trim56Q80VI1 Gm25382-201ENSMUST00000157811 97 ntBASIC1.55□□□□□ -2.16
Trim56Q80VI1 Mir3968-201ENSMUST00000175355 100 ntBASIC1.55□□□□□ -2.16
Trim56Q80VI1 Mir7665-201ENSMUST00000184907 63 ntBASIC1.55□□□□□ -2.16
Trim56Q80VI1 Mir509-201ENSMUST00000196089 75 ntBASIC1.55□□□□□ -2.16
Trim56Q80VI1 Gm24208-201ENSMUST00000082783 135 ntBASIC1.55□□□□□ -2.16
Trim56Q80VI1 Mir30a-201ENSMUST00000083471 71 ntBASIC1.55□□□□□ -2.16
Trim56Q80VI1 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
Trim56Q80VI1 Gm25056-201ENSMUST00000157372 62 ntBASIC1.54□□□□□ -2.16
Trim56Q80VI1 Gm22541-201ENSMUST00000158165 127 ntBASIC1.54□□□□□ -2.16
Trim56Q80VI1 Traj60-201ENSMUST00000167781 54 ntBASIC1.54□□□□□ -2.16
Trim56Q80VI1 Gm25693-201ENSMUST00000175443 85 ntBASIC1.54□□□□□ -2.16
Trim56Q80VI1 Gm16399-201ENSMUST00000181423 219 ntBASIC1.54□□□□□ -2.16
Trim56Q80VI1 Gm43927-201ENSMUST00000204599 117 ntBASIC1.54□□□□□ -2.16
Trim56Q80VI1 Gm24203-201ENSMUST00000082949 114 ntBASIC1.54□□□□□ -2.16
Trim56Q80VI1 Mir1187-201ENSMUST00000116936 122 ntBASIC1.53□□□□□ -2.16
Trim56Q80VI1 Mir3098-201ENSMUST00000175416 87 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 158.3 ms