Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm42533-201ENSMUST00000196247 157 ntBASIC1.16□□□□□ -2.22
Ddx55Q6ZPL9 Gm44488-201ENSMUST00000199467 119 ntBASIC1.16□□□□□ -2.22
Ddx55Q6ZPL9 Snord78-201ENSMUST00000104032 66 ntBASIC1.15□□□□□ -2.23
Ddx55Q6ZPL9 Gm25416-201ENSMUST00000104221 107 ntBASIC1.15□□□□□ -2.23
Ddx55Q6ZPL9 Gm22490-201ENSMUST00000157188 119 ntBASIC1.15□□□□□ -2.23
Ddx55Q6ZPL9 Gm23008-201ENSMUST00000158946 80 ntBASIC1.15□□□□□ -2.23
Ddx55Q6ZPL9 Gm44469-201ENSMUST00000198558 79 ntBASIC1.15□□□□□ -2.23
Ddx55Q6ZPL9 Mir7-1-201ENSMUST00000083500 108 ntBASIC1.15□□□□□ -2.23
Ddx55Q6ZPL9 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.15□□□□□ -2.23
Ddx55Q6ZPL9 Gm22466-201ENSMUST00000175278 69 ntBASIC1.14□□□□□ -2.23
Ddx55Q6ZPL9 Gm22319-201ENSMUST00000157147 122 ntBASIC1.13□□□□□ -2.23
Ddx55Q6ZPL9 Gm24947-201ENSMUST00000158334 110 ntBASIC1.13□□□□□ -2.23
Ddx55Q6ZPL9 Gm27993-201ENSMUST00000184362 85 ntBASIC1.13□□□□□ -2.23
Ddx55Q6ZPL9 Mir500-201ENSMUST00000093600 92 ntBASIC1.13□□□□□ -2.23
Ddx55Q6ZPL9 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Ddx55Q6ZPL9 Gm24549-201ENSMUST00000158647 139 ntBASIC1.12□□□□□ -2.23
Ddx55Q6ZPL9 Gm10548-202ENSMUST00000165672 272 ntBASIC1.12□□□□□ -2.23
Ddx55Q6ZPL9 Gm25166-201ENSMUST00000158909 111 ntBASIC1.11□□□□□ -2.23
Ddx55Q6ZPL9 Gm23301-201ENSMUST00000082713 65 ntBASIC1.11□□□□□ -2.23
Ddx55Q6ZPL9 Gm24527-201ENSMUST00000082920 107 ntBASIC1.11□□□□□ -2.23
Ddx55Q6ZPL9 Gm24234-201ENSMUST00000104316 107 ntBASIC1.1□□□□□ -2.23
Ddx55Q6ZPL9 Gm26369-201ENSMUST00000157825 100 ntBASIC1.1□□□□□ -2.23
Ddx55Q6ZPL9 Gm22089-201ENSMUST00000158336 102 ntBASIC1.1□□□□□ -2.23
Ddx55Q6ZPL9 Gm23857-201ENSMUST00000158379 111 ntBASIC1.1□□□□□ -2.23
Ddx55Q6ZPL9 Gm26158-201ENSMUST00000158973 119 ntBASIC1.1□□□□□ -2.23
Ddx55Q6ZPL9 Gm27974-201ENSMUST00000183415 105 ntBASIC1.1□□□□□ -2.23
Ddx55Q6ZPL9 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC1.1□□□□□ -2.23
Ddx55Q6ZPL9 Gm25629-201ENSMUST00000084001 107 ntBASIC1.1□□□□□ -2.23
Ddx55Q6ZPL9 Gm6272-201ENSMUST00000121256 171 ntBASIC1.09□□□□□ -2.23
Ddx55Q6ZPL9 Gm22213-201ENSMUST00000157564 119 ntBASIC1.09□□□□□ -2.23
Ddx55Q6ZPL9 Mir15a-201ENSMUST00000175266 84 ntBASIC1.09□□□□□ -2.23
Ddx55Q6ZPL9 Snord69-201ENSMUST00000104024 80 ntBASIC1.08□□□□□ -2.24
Ddx55Q6ZPL9 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Ddx55Q6ZPL9 Gm24777-201ENSMUST00000157644 107 ntBASIC1.08□□□□□ -2.24
Ddx55Q6ZPL9 Gm22503-201ENSMUST00000158983 115 ntBASIC1.08□□□□□ -2.24
Ddx55Q6ZPL9 Mir7091-201ENSMUST00000184075 79 ntBASIC1.08□□□□□ -2.24
Ddx55Q6ZPL9 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.08□□□□□ -2.24
Ddx55Q6ZPL9 Gm24524-201ENSMUST00000082925 170 ntBASIC1.08□□□□□ -2.24
Ddx55Q6ZPL9 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
Ddx55Q6ZPL9 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Ddx55Q6ZPL9 Gm23644-201ENSMUST00000157856 77 ntBASIC1.07□□□□□ -2.24
Ddx55Q6ZPL9 Gm26421-201ENSMUST00000104279 132 ntBASIC1.06□□□□□ -2.24
Ddx55Q6ZPL9 Gm23853-201ENSMUST00000158375 104 ntBASIC1.06□□□□□ -2.24
Ddx55Q6ZPL9 Gm44481-201ENSMUST00000197288 84 ntBASIC1.06□□□□□ -2.24
Ddx55Q6ZPL9 Gm44339-201ENSMUST00000200598 84 ntBASIC1.06□□□□□ -2.24
Ddx55Q6ZPL9 Gm25987-201ENSMUST00000083234 107 ntBASIC1.06□□□□□ -2.24
Ddx55Q6ZPL9 Snord80-201ENSMUST00000083801 81 ntBASIC1.06□□□□□ -2.24
Ddx55Q6ZPL9 Gm25787-201ENSMUST00000104709 92 ntBASIC1.05□□□□□ -2.24
Ddx55Q6ZPL9 Gm14884-201ENSMUST00000120456 196 ntBASIC1.05□□□□□ -2.24
Ddx55Q6ZPL9 Gm23917-201ENSMUST00000175256 98 ntBASIC1.05□□□□□ -2.24
Ddx55Q6ZPL9 Gm25693-201ENSMUST00000175443 85 ntBASIC1.05□□□□□ -2.24
Ddx55Q6ZPL9 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
Ddx55Q6ZPL9 Gm43977-201ENSMUST00000203970 189 ntBASIC1.05□□□□□ -2.24
Ddx55Q6ZPL9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
Ddx55Q6ZPL9 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Ddx55Q6ZPL9 Gm22786-201ENSMUST00000104086 122 ntBASIC1.04□□□□□ -2.24
Ddx55Q6ZPL9 Gm44602-201ENSMUST00000205948 132 ntBASIC1.04□□□□□ -2.24
Ddx55Q6ZPL9 Gm26062-201ENSMUST00000083379 107 ntBASIC1.04□□□□□ -2.24
Ddx55Q6ZPL9 Gm11694-201ENSMUST00000118637 159 ntBASIC1.03□□□□□ -2.24
Ddx55Q6ZPL9 Gm13577-201ENSMUST00000121365 205 ntBASIC1.03□□□□□ -2.24
Ddx55Q6ZPL9 Gm24290-201ENSMUST00000157634 96 ntBASIC1.03□□□□□ -2.24
Ddx55Q6ZPL9 Gm24129-201ENSMUST00000158537 97 ntBASIC1.03□□□□□ -2.24
Ddx55Q6ZPL9 Gm27587-201ENSMUST00000185116 163 ntBASIC1.03□□□□□ -2.24
Ddx55Q6ZPL9 Mir219b-201ENSMUST00000198317 65 ntBASIC1.03□□□□□ -2.24
Ddx55Q6ZPL9 DQ267101-201ENSMUST00000082562 73 ntBASIC1.03□□□□□ -2.24
Ddx55Q6ZPL9 Gm25370-201ENSMUST00000158159 94 ntBASIC1.02□□□□□ -2.25
Ddx55Q6ZPL9 Gm25600-201ENSMUST00000158357 106 ntBASIC1.02□□□□□ -2.25
Ddx55Q6ZPL9 Mir6380-201ENSMUST00000184334 81 ntBASIC1.02□□□□□ -2.25
Ddx55Q6ZPL9 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Ddx55Q6ZPL9 mt-Tv-201ENSMUST00000082389 69 ntBASIC1.02□□□□□ -2.25
Ddx55Q6ZPL9 Mir101a-201ENSMUST00000083517 83 ntBASIC1.02□□□□□ -2.25
Ddx55Q6ZPL9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC1.02□□□□□ -2.25
Ddx55Q6ZPL9 Gm22004-201ENSMUST00000101884 107 ntBASIC1.01□□□□□ -2.25
Ddx55Q6ZPL9 Gm23065-201ENSMUST00000158236 130 ntBASIC1.01□□□□□ -2.25
Ddx55Q6ZPL9 Mir100-201ENSMUST00000175270 80 ntBASIC1.01□□□□□ -2.25
Ddx55Q6ZPL9 Gm23416-201ENSMUST00000175520 95 ntBASIC1.01□□□□□ -2.25
Ddx55Q6ZPL9 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.01□□□□□ -2.25
Ddx55Q6ZPL9 Mir33-201ENSMUST00000083531 69 ntBASIC1.01□□□□□ -2.25
Ddx55Q6ZPL9 Snord35a-201ENSMUST00000083884 90 ntBASIC1.01□□□□□ -2.25
Ddx55Q6ZPL9 Gm26081-201ENSMUST00000104068 132 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm22030-201ENSMUST00000116942 63 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm25380-201ENSMUST00000175463 107 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm24641-201ENSMUST00000178055 107 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm25484-201ENSMUST00000178217 107 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm26138-201ENSMUST00000179236 107 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm22821-201ENSMUST00000179288 107 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm25618-201ENSMUST00000179484 107 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm44211-201ENSMUST00000204867 145 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 n-R5s96-201ENSMUST00000082574 124 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm25899-201ENSMUST00000082672 141 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm23298-201ENSMUST00000083181 107 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm24614-201ENSMUST00000083269 107 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Snord32a-201ENSMUST00000083285 83 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm22057-201ENSMUST00000083387 107 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Gm25516-201ENSMUST00000083857 107 ntBASIC1□□□□□ -2.25
Ddx55Q6ZPL9 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.99□□□□□ -2.25
Ddx55Q6ZPL9 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.99□□□□□ -2.25
Ddx55Q6ZPL9 Gm25138-201ENSMUST00000083248 136 ntBASIC0.99□□□□□ -2.25
Ddx55Q6ZPL9 Gm23344-201ENSMUST00000083818 68 ntBASIC0.99□□□□□ -2.25
Ddx55Q6ZPL9 Gm25683-201ENSMUST00000083940 131 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 148.5 ms