Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.42□□□□□ -2.34
Smchd1Q6P5D8 Traj61-201ENSMUST00000165025 72 ntBASIC0.42□□□□□ -2.34
Smchd1Q6P5D8 Gm23416-201ENSMUST00000175520 95 ntBASIC0.42□□□□□ -2.34
Smchd1Q6P5D8 Gm27289-201ENSMUST00000183341 82 ntBASIC0.42□□□□□ -2.34
Smchd1Q6P5D8 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.42□□□□□ -2.34
Smchd1Q6P5D8 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.42□□□□□ -2.34
Smchd1Q6P5D8 Snord33-201ENSMUST00000083694 84 ntBASIC0.42□□□□□ -2.34
Smchd1Q6P5D8 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.41□□□□□ -2.34
Smchd1Q6P5D8 Gm23922-201ENSMUST00000178792 79 ntBASIC0.41□□□□□ -2.34
Smchd1Q6P5D8 Gm24657-201ENSMUST00000180085 79 ntBASIC0.41□□□□□ -2.34
Smchd1Q6P5D8 Gm22996-201ENSMUST00000180236 79 ntBASIC0.41□□□□□ -2.34
Smchd1Q6P5D8 Gm29535-201ENSMUST00000185723 109 ntBASIC0.41□□□□□ -2.34
Smchd1Q6P5D8 Gm28143-201ENSMUST00000191082 109 ntBASIC0.41□□□□□ -2.34
Smchd1Q6P5D8 Mir6896-201ENSMUST00000198033 73 ntBASIC0.41□□□□□ -2.34
Smchd1Q6P5D8 Gm44211-201ENSMUST00000204867 145 ntBASIC0.41□□□□□ -2.34
Smchd1Q6P5D8 Gm44602-201ENSMUST00000205948 132 ntBASIC0.41□□□□□ -2.34
Smchd1Q6P5D8 Gm12013-201ENSMUST00000121971 155 ntBASIC0.4□□□□□ -2.34
Smchd1Q6P5D8 mt-Tv-201ENSMUST00000082389 69 ntBASIC0.4□□□□□ -2.34
Smchd1Q6P5D8 Gm25894-201ENSMUST00000083458 75 ntBASIC0.4□□□□□ -2.34
Smchd1Q6P5D8 Mir20b-201ENSMUST00000102087 80 ntBASIC0.4□□□□□ -2.35
Smchd1Q6P5D8 Gm25753-201ENSMUST00000116792 121 ntBASIC0.4□□□□□ -2.35
Smchd1Q6P5D8 Gm25370-201ENSMUST00000158159 94 ntBASIC0.4□□□□□ -2.35
Smchd1Q6P5D8 Gm23020-201ENSMUST00000158766 253 ntBASIC0.4□□□□□ -2.35
Smchd1Q6P5D8 Gm28435-201ENSMUST00000185496 108 ntBASIC0.4□□□□□ -2.35
Smchd1Q6P5D8 Gm26454-201ENSMUST00000082682 107 ntBASIC0.4□□□□□ -2.35
Smchd1Q6P5D8 Gm24793-201ENSMUST00000104289 132 ntBASIC0.39□□□□□ -2.35
Smchd1Q6P5D8 Gm44828-201ENSMUST00000203745 106 ntBASIC0.39□□□□□ -2.35
Smchd1Q6P5D8 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.39□□□□□ -2.35
Smchd1Q6P5D8 Gm23989-201ENSMUST00000117030 66 ntBASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm24842-201ENSMUST00000158681 54 ntBASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Snord95-201ENSMUST00000082846 68 ntBASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm24009-201ENSMUST00000157734 93 ntBASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm25885-201ENSMUST00000157779 109 ntBASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.38□□□□□ -2.35
Smchd1Q6P5D8 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.37□□□□□ -2.35
Smchd1Q6P5D8 Gm22522-201ENSMUST00000158271 151 ntBASIC0.37□□□□□ -2.35
Smchd1Q6P5D8 Gm25618-201ENSMUST00000179484 107 ntBASIC0.37□□□□□ -2.35
Smchd1Q6P5D8 Gm27717-201ENSMUST00000183933 151 ntBASIC0.37□□□□□ -2.35
Smchd1Q6P5D8 Gm23969-201ENSMUST00000083324 74 ntBASIC0.37□□□□□ -2.35
Smchd1Q6P5D8 Gm26152-201ENSMUST00000157427 101 ntBASIC0.37□□□□□ -2.35
Smchd1Q6P5D8 Gm22706-201ENSMUST00000157907 112 ntBASIC0.37□□□□□ -2.35
Smchd1Q6P5D8 Snora75-201ENSMUST00000082903 133 ntBASIC0.37□□□□□ -2.35
Smchd1Q6P5D8 Gm23917-201ENSMUST00000175256 98 ntBASIC0.36□□□□□ -2.35
Smchd1Q6P5D8 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.36□□□□□ -2.35
Smchd1Q6P5D8 Gm23678-201ENSMUST00000083157 107 ntBASIC0.36□□□□□ -2.35
Smchd1Q6P5D8 Mir200a-201ENSMUST00000083466 90 ntBASIC0.36□□□□□ -2.35
Smchd1Q6P5D8 Gm22759-201ENSMUST00000102276 96 ntBASIC0.35□□□□□ -2.35
Smchd1Q6P5D8 Gm25425-201ENSMUST00000157611 96 ntBASIC0.35□□□□□ -2.35
Smchd1Q6P5D8 Gm25693-201ENSMUST00000175443 85 ntBASIC0.35□□□□□ -2.35
Smchd1Q6P5D8 Mir216b-201ENSMUST00000102363 86 ntBASIC0.35□□□□□ -2.35
Smchd1Q6P5D8 Gm12086-201ENSMUST00000120863 228 ntBASIC0.35□□□□□ -2.35
Smchd1Q6P5D8 Gm24167-201ENSMUST00000177733 124 ntBASIC0.35□□□□□ -2.35
Smchd1Q6P5D8 Gm24028-201ENSMUST00000178991 124 ntBASIC0.35□□□□□ -2.35
Smchd1Q6P5D8 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Smchd1Q6P5D8 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.33□□□□□ -2.36
Smchd1Q6P5D8 AC157602.1-201ENSMUST00000197446 105 ntBASIC0.33□□□□□ -2.36
Smchd1Q6P5D8 Gm25006-201ENSMUST00000083813 107 ntBASIC0.33□□□□□ -2.36
Smchd1Q6P5D8 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
Smchd1Q6P5D8 Gm25887-201ENSMUST00000157777 84 ntBASIC0.33□□□□□ -2.36
Smchd1Q6P5D8 Gm24500-201ENSMUST00000158447 124 ntBASIC0.33□□□□□ -2.36
Smchd1Q6P5D8 Mir6342-201ENSMUST00000183870 125 ntBASIC0.33□□□□□ -2.36
Smchd1Q6P5D8 Mir1949-202ENSMUST00000199259 70 ntBASIC0.33□□□□□ -2.36
Smchd1Q6P5D8 Gm26168-201ENSMUST00000083787 112 ntBASIC0.33□□□□□ -2.36
Smchd1Q6P5D8 AC158982.2-201ENSMUST00000226283 184 ntBASIC0.32□□□□□ -2.36
Smchd1Q6P5D8 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.32□□□□□ -2.36
Smchd1Q6P5D8 Gm26133-201ENSMUST00000157363 100 ntBASIC0.31□□□□□ -2.36
Smchd1Q6P5D8 Gm22384-201ENSMUST00000158187 104 ntBASIC0.31□□□□□ -2.36
Smchd1Q6P5D8 Gm28270-201ENSMUST00000188550 109 ntBASIC0.31□□□□□ -2.36
Smchd1Q6P5D8 Gm28328-201ENSMUST00000188869 109 ntBASIC0.31□□□□□ -2.36
Smchd1Q6P5D8 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.31□□□□□ -2.36
Smchd1Q6P5D8 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.31□□□□□ -2.36
Smchd1Q6P5D8 Gm23350-201ENSMUST00000158429 103 ntBASIC0.31□□□□□ -2.36
Smchd1Q6P5D8 Gm38295-201ENSMUST00000191951 151 ntBASIC0.31□□□□□ -2.36
Smchd1Q6P5D8 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.31□□□□□ -2.36
Smchd1Q6P5D8 Gm24524-201ENSMUST00000082925 170 ntBASIC0.31□□□□□ -2.36
Smchd1Q6P5D8 Gm25040-201ENSMUST00000103877 66 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm25091-201ENSMUST00000103997 71 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm23749-201ENSMUST00000104223 131 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm22672-201ENSMUST00000104414 134 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm22772-201ENSMUST00000104451 121 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm24399-201ENSMUST00000157869 74 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm23065-201ENSMUST00000158236 130 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm23344-201ENSMUST00000083818 68 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Mir297a-2-201ENSMUST00000103795 90 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm23900-201ENSMUST00000157569 108 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm22788-201ENSMUST00000157876 61 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm26116-201ENSMUST00000175600 77 ntBASIC0.3□□□□□ -2.36
Smchd1Q6P5D8 Gm23966-201ENSMUST00000179823 107 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 156 ms