Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col18a1P39061 Gm22780-201ENSMUST00000104084 132 ntBASIC2.04□□□□□ -2.08
Col18a1P39061 Gm21885-201ENSMUST00000178891 327 ntBASIC2.04□□□□□ -2.08
Col18a1P39061 Gm26712-201ENSMUST00000180813 217 ntBASIC2.04□□□□□ -2.08
Col18a1P39061 Gm20118-201ENSMUST00000187207 162 ntBASIC2.04□□□□□ -2.08
Col18a1P39061 Mir509-201ENSMUST00000196089 75 ntBASIC2.04□□□□□ -2.08
Col18a1P39061 Gm25357-201ENSMUST00000082745 72 ntBASIC2.04□□□□□ -2.08
Col18a1P39061 Gm23730-201ENSMUST00000083236 107 ntBASIC2.04□□□□□ -2.08
Col18a1P39061 Mir29c-201ENSMUST00000083614 88 ntBASIC2.04□□□□□ -2.08
Col18a1P39061 Mir29a-201ENSMUST00000083676 88 ntBASIC2.04□□□□□ -2.08
Col18a1P39061 Gm24252-201ENSMUST00000083700 132 ntBASIC2.04□□□□□ -2.08
Col18a1P39061 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col18a1P39061 Gm25945-201ENSMUST00000122484 135 ntBASIC2.03□□□□□ -2.08
Col18a1P39061 Gm24851-201ENSMUST00000158028 103 ntBASIC2.03□□□□□ -2.08
Col18a1P39061 Gm24668-201ENSMUST00000158935 104 ntBASIC2.03□□□□□ -2.08
Col18a1P39061 Mir6379-201ENSMUST00000183392 115 ntBASIC2.03□□□□□ -2.08
Col18a1P39061 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Col18a1P39061 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Col18a1P39061 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.03□□□□□ -2.09
Col18a1P39061 Snord71-201ENSMUST00000104361 85 ntBASIC2.03□□□□□ -2.09
Col18a1P39061 Gm24725-201ENSMUST00000158229 125 ntBASIC2.03□□□□□ -2.09
Col18a1P39061 Mir7063-201ENSMUST00000184158 91 ntBASIC2.03□□□□□ -2.09
Col18a1P39061 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Col18a1P39061 Gm22494-201ENSMUST00000104495 128 ntBASIC2.02□□□□□ -2.09
Col18a1P39061 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC2.02□□□□□ -2.09
Col18a1P39061 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC2.02□□□□□ -2.09
Col18a1P39061 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC2.02□□□□□ -2.09
Col18a1P39061 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC2.02□□□□□ -2.09
Col18a1P39061 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC2.02□□□□□ -2.09
Col18a1P39061 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC2.02□□□□□ -2.09
Col18a1P39061 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC2.02□□□□□ -2.09
Col18a1P39061 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC2.02□□□□□ -2.09
Col18a1P39061 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC2.02□□□□□ -2.09
Col18a1P39061 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC2.02□□□□□ -2.09
Col18a1P39061 Gm44602-201ENSMUST00000205948 132 ntBASIC2.02□□□□□ -2.09
Col18a1P39061 Mir20b-201ENSMUST00000102087 80 ntBASIC2.01□□□□□ -2.09
Col18a1P39061 Gm22658-201ENSMUST00000104196 155 ntBASIC2.01□□□□□ -2.09
Col18a1P39061 Gm23996-201ENSMUST00000158062 131 ntBASIC2.01□□□□□ -2.09
Col18a1P39061 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.01□□□□□ -2.09
Col18a1P39061 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Col18a1P39061 Gm26259-201ENSMUST00000104778 97 ntBASIC2□□□□□ -2.09
Col18a1P39061 Mir1191-201ENSMUST00000116883 120 ntBASIC2□□□□□ -2.09
Col18a1P39061 n-R5s15-201ENSMUST00000122635 111 ntBASIC2□□□□□ -2.09
Col18a1P39061 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC2□□□□□ -2.09
Col18a1P39061 Gm23249-201ENSMUST00000083369 161 ntBASIC2□□□□□ -2.09
Col18a1P39061 Mir10b-201ENSMUST00000083566 68 ntBASIC2□□□□□ -2.09
Col18a1P39061 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Col18a1P39061 Mir3961-201ENSMUST00000198795 59 ntBASIC2□□□□□ -2.09
Col18a1P39061 AC164612.2-202ENSMUST00000216314 253 ntBASIC2□□□□□ -2.09
Col18a1P39061 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Col18a1P39061 Mir487b-201ENSMUST00000102265 82 ntBASIC1.99□□□□□ -2.09
Col18a1P39061 Gm24288-201ENSMUST00000157630 144 ntBASIC1.99□□□□□ -2.09
Col18a1P39061 Gm26306-201ENSMUST00000157773 119 ntBASIC1.99□□□□□ -2.09
Col18a1P39061 Gm23558-201ENSMUST00000157823 80 ntBASIC1.99□□□□□ -2.09
Col18a1P39061 Gm22768-201ENSMUST00000158366 153 ntBASIC1.99□□□□□ -2.09
Col18a1P39061 AC141438.3-201ENSMUST00000215632 202 ntBASIC1.99□□□□□ -2.09
Col18a1P39061 Gm24134-201ENSMUST00000083361 71 ntBASIC1.99□□□□□ -2.09
Col18a1P39061 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col18a1P39061 Mir876-201ENSMUST00000104659 81 ntBASIC1.98□□□□□ -2.09
Col18a1P39061 Gm25622-201ENSMUST00000157217 104 ntBASIC1.98□□□□□ -2.09
Col18a1P39061 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
Col18a1P39061 Gm25416-201ENSMUST00000104221 107 ntBASIC1.98□□□□□ -2.09
Col18a1P39061 Gm6954-201ENSMUST00000117416 225 ntBASIC1.98□□□□□ -2.09
Col18a1P39061 Gm26213-201ENSMUST00000158582 110 ntBASIC1.98□□□□□ -2.09
Col18a1P39061 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.98□□□□□ -2.09
Col18a1P39061 Gm25949-201ENSMUST00000175333 114 ntBASIC1.98□□□□□ -2.09
Col18a1P39061 Gm24218-201ENSMUST00000180163 105 ntBASIC1.98□□□□□ -2.09
Col18a1P39061 Gm43927-201ENSMUST00000204599 117 ntBASIC1.98□□□□□ -2.09
Col18a1P39061 Gm25796-201ENSMUST00000082645 163 ntBASIC1.98□□□□□ -2.09
Col18a1P39061 Gm25750-201ENSMUST00000175483 112 ntBASIC1.97□□□□□ -2.09
Col18a1P39061 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Col18a1P39061 Gm23656-201ENSMUST00000122626 112 ntBASIC1.96□□□□□ -2.1
Col18a1P39061 Gm6985-201ENSMUST00000121255 271 ntBASIC1.95□□□□□ -2.1
Col18a1P39061 Gm16539-201ENSMUST00000160086 327 ntBASIC1.95□□□□□ -2.1
Col18a1P39061 Gm24575-201ENSMUST00000175502 77 ntBASIC1.95□□□□□ -2.1
Col18a1P39061 Gm45288-201ENSMUST00000210236 151 ntBASIC1.95□□□□□ -2.1
Col18a1P39061 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Col18a1P39061 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.95□□□□□ -2.1
Col18a1P39061 Gm24223-201ENSMUST00000158827 90 ntBASIC1.95□□□□□ -2.1
Col18a1P39061 Gm22884-201ENSMUST00000083127 140 ntBASIC1.95□□□□□ -2.1
Col18a1P39061 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1.94□□□□□ -2.1
Col18a1P39061 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.94□□□□□ -2.1
Col18a1P39061 Gm11694-201ENSMUST00000118637 159 ntBASIC1.94□□□□□ -2.1
Col18a1P39061 Gm20391-201ENSMUST00000174722 106 ntBASIC1.94□□□□□ -2.1
Col18a1P39061 Gm27297-201ENSMUST00000183395 105 ntBASIC1.94□□□□□ -2.1
Col18a1P39061 Gm27878-201ENSMUST00000184000 106 ntBASIC1.94□□□□□ -2.1
Col18a1P39061 Mir6950-201ENSMUST00000184438 73 ntBASIC1.94□□□□□ -2.1
Col18a1P39061 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC1.94□□□□□ -2.1
Col18a1P39061 Gm25629-201ENSMUST00000084001 107 ntBASIC1.94□□□□□ -2.1
Col18a1P39061 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Col18a1P39061 Gm22929-201ENSMUST00000175517 107 ntBASIC1.93□□□□□ -2.1
Col18a1P39061 Mir6419-201ENSMUST00000184784 113 ntBASIC1.93□□□□□ -2.1
Col18a1P39061 Gm28862-201ENSMUST00000188246 163 ntBASIC1.93□□□□□ -2.1
Col18a1P39061 Gm24202-201ENSMUST00000082948 103 ntBASIC1.93□□□□□ -2.1
Col18a1P39061 Mir15b-201ENSMUST00000083646 64 ntBASIC1.93□□□□□ -2.1
Col18a1P39061 Gm27517-201ENSMUST00000184347 236 ntBASIC1.93□□□□□ -2.1
Col18a1P39061 Gm38295-201ENSMUST00000191951 151 ntBASIC1.93□□□□□ -2.1
Col18a1P39061 Mir126a-201ENSMUST00000083606 73 ntBASIC1.93□□□□□ -2.1
Col18a1P39061 Gm26375-201ENSMUST00000101829 106 ntBASIC1.92□□□□□ -2.1
Col18a1P39061 Scarna9-201ENSMUST00000104318 70 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 145.7 ms