Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm23303-201ENSMUST00000082714 152 ntBASIC-0.7□□□□□ -2.52
Sdc1P18828 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.71□□□□□ -2.52
Sdc1P18828 Gm24225-201ENSMUST00000158825 98 ntBASIC-0.72□□□□□ -2.52
Sdc1P18828 Traj61-201ENSMUST00000165025 72 ntBASIC-0.72□□□□□ -2.52
Sdc1P18828 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.72□□□□□ -2.52
Sdc1P18828 Gm43907-201ENSMUST00000203128 117 ntBASIC-0.72□□□□□ -2.52
Sdc1P18828 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.72□□□□□ -2.52
Sdc1P18828 Mir96-201ENSMUST00000083652 106 ntBASIC-0.72□□□□□ -2.52
Sdc1P18828 Snord67-201ENSMUST00000104033 111 ntBASIC-0.73□□□□□ -2.53
Sdc1P18828 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.73□□□□□ -2.53
Sdc1P18828 Mir1298-201ENSMUST00000116681 98 ntBASIC-0.73□□□□□ -2.53
Sdc1P18828 Gm23715-201ENSMUST00000157354 106 ntBASIC-0.73□□□□□ -2.53
Sdc1P18828 Gm24524-201ENSMUST00000082925 170 ntBASIC-0.73□□□□□ -2.53
Sdc1P18828 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.73□□□□□ -2.53
Sdc1P18828 Mir764-201ENSMUST00000103259 108 ntBASIC-0.74□□□□□ -2.53
Sdc1P18828 Gm22105-201ENSMUST00000116734 116 ntBASIC-0.74□□□□□ -2.53
Sdc1P18828 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.74□□□□□ -2.53
Sdc1P18828 Gm22720-201ENSMUST00000122710 87 ntBASIC-0.74□□□□□ -2.53
Sdc1P18828 Snord2-201ENSMUST00000157899 69 ntBASIC-0.74□□□□□ -2.53
Sdc1P18828 Gm26403-201ENSMUST00000158500 105 ntBASIC-0.74□□□□□ -2.53
Sdc1P18828 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.74□□□□□ -2.53
Sdc1P18828 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.74□□□□□ -2.53
Sdc1P18828 Gm11644-201ENSMUST00000119735 150 ntBASIC-0.75□□□□□ -2.53
Sdc1P18828 Mir21c-201ENSMUST00000184910 78 ntBASIC-0.75□□□□□ -2.53
Sdc1P18828 Gm44922-201ENSMUST00000206690 90 ntBASIC-0.75□□□□□ -2.53
Sdc1P18828 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.75□□□□□ -2.53
Sdc1P18828 Gm25055-201ENSMUST00000157369 76 ntBASIC-0.76□□□□□ -2.53
Sdc1P18828 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.76□□□□□ -2.53
Sdc1P18828 Gm22348-201ENSMUST00000178674 79 ntBASIC-0.76□□□□□ -2.53
Sdc1P18828 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.76□□□□□ -2.53
Sdc1P18828 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.77□□□□□ -2.53
Sdc1P18828 Gm23253-201ENSMUST00000157441 104 ntBASIC-0.77□□□□□ -2.53
Sdc1P18828 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.77□□□□□ -2.53
Sdc1P18828 Gm27884-201ENSMUST00000183865 76 ntBASIC-0.77□□□□□ -2.53
Sdc1P18828 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.77□□□□□ -2.53
Sdc1P18828 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.77□□□□□ -2.53
Sdc1P18828 Ighv15-1-201ENSMUST00000194450 276 ntBASIC-0.77□□□□□ -2.53
Sdc1P18828 Snord80-202ENSMUST00000199023 77 ntBASIC-0.77□□□□□ -2.53
Sdc1P18828 Gm25081-201ENSMUST00000082534 108 ntBASIC-0.77□□□□□ -2.53
Sdc1P18828 Gm25337-201ENSMUST00000083723 104 ntBASIC-0.77□□□□□ -2.53
Sdc1P18828 Gm24374-201ENSMUST00000104394 106 ntBASIC-0.78□□□□□ -2.53
Sdc1P18828 Mir669m-1-201ENSMUST00000158945 98 ntBASIC-0.78□□□□□ -2.53
Sdc1P18828 Gm17020-201ENSMUST00000172274 274 ntBASIC-0.78□□□□□ -2.53
Sdc1P18828 Mir21b-201ENSMUST00000184317 108 ntBASIC-0.78□□□□□ -2.53
Sdc1P18828 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.78□□□□□ -2.53
Sdc1P18828 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.78□□□□□ -2.53
Sdc1P18828 Gm12013-201ENSMUST00000121971 155 ntBASIC-0.79□□□□□ -2.54
Sdc1P18828 Gm25296-201ENSMUST00000082566 67 ntBASIC-0.79□□□□□ -2.54
Sdc1P18828 Gm25141-201ENSMUST00000083177 107 ntBASIC-0.79□□□□□ -2.54
Sdc1P18828 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.8□□□□□ -2.54
Sdc1P18828 Gm26133-201ENSMUST00000157363 100 ntBASIC-0.8□□□□□ -2.54
Sdc1P18828 Gm23900-201ENSMUST00000157569 108 ntBASIC-0.8□□□□□ -2.54
Sdc1P18828 Snora26-201ENSMUST00000175614 121 ntBASIC-0.8□□□□□ -2.54
Sdc1P18828 Gm22951-201ENSMUST00000179471 107 ntBASIC-0.8□□□□□ -2.54
Sdc1P18828 AC158982.2-201ENSMUST00000226283 184 ntBASIC-0.8□□□□□ -2.54
Sdc1P18828 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.8□□□□□ -2.54
Sdc1P18828 Gm25899-201ENSMUST00000082672 141 ntBASIC-0.8□□□□□ -2.54
Sdc1P18828 Gm23445-201ENSMUST00000082800 107 ntBASIC-0.8□□□□□ -2.54
Sdc1P18828 Mir3101-201ENSMUST00000175607 88 ntBASIC-0.81□□□□□ -2.54
Sdc1P18828 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC-0.81□□□□□ -2.54
Sdc1P18828 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.81□□□□□ -2.54
Sdc1P18828 Gm26438-201ENSMUST00000082593 107 ntBASIC-0.81□□□□□ -2.54
Sdc1P18828 Gm21940-201ENSMUST00000204940 2278 ntBASIC-0.81□□□□□ -2.54
Sdc1P18828 n-R5s8-201ENSMUST00000104121 118 ntBASIC-0.82□□□□□ -2.54
Sdc1P18828 Gm24648-201ENSMUST00000157111 132 ntBASIC-0.82□□□□□ -2.54
Sdc1P18828 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.82□□□□□ -2.54
Sdc1P18828 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.82□□□□□ -2.54
Sdc1P18828 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.82□□□□□ -2.54
Sdc1P18828 Gm23291-201ENSMUST00000175611 78 ntBASIC-0.82□□□□□ -2.54
Sdc1P18828 Gm27465-201ENSMUST00000184290 91 ntBASIC-0.82□□□□□ -2.54
Sdc1P18828 Gm22169-201ENSMUST00000083229 107 ntBASIC-0.82□□□□□ -2.54
Sdc1P18828 Gm25656-201ENSMUST00000158466 66 ntBASIC-0.83□□□□□ -2.54
Sdc1P18828 AC154390.1-201ENSMUST00000225629 277 ntBASIC-0.83□□□□□ -2.54
Sdc1P18828 Gm22827-201ENSMUST00000083766 107 ntBASIC-0.83□□□□□ -2.54
Sdc1P18828 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.84□□□□□ -2.54
Sdc1P18828 Gm26204-201ENSMUST00000082906 107 ntBASIC-0.84□□□□□ -2.54
Sdc1P18828 Snora62-201ENSMUST00000082991 149 ntBASIC-0.84□□□□□ -2.54
Sdc1P18828 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.85□□□□□ -2.55
Sdc1P18828 Gm23260-201ENSMUST00000158317 172 ntBASIC-0.86□□□□□ -2.55
Sdc1P18828 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
Sdc1P18828 Gm45002-201ENSMUST00000208045 120 ntBASIC-0.86□□□□□ -2.55
Sdc1P18828 Gm6293-201ENSMUST00000050339 195 ntBASIC-0.86□□□□□ -2.55
Sdc1P18828 mt-Tw-201ENSMUST00000082397 67 ntBASIC-0.86□□□□□ -2.55
Sdc1P18828 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
Sdc1P18828 Mir18b-201ENSMUST00000103923 83 ntBASIC-0.87□□□□□ -2.55
Sdc1P18828 Gm44338-201ENSMUST00000198614 110 ntBASIC-0.87□□□□□ -2.55
Sdc1P18828 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-0.88□□□□□ -2.55
Sdc1P18828 Gm23901-201ENSMUST00000157570 107 ntBASIC-0.88□□□□□ -2.55
Sdc1P18828 Gm24399-201ENSMUST00000157869 74 ntBASIC-0.88□□□□□ -2.55
Sdc1P18828 Gm26426-201ENSMUST00000177866 123 ntBASIC-0.88□□□□□ -2.55
Sdc1P18828 Gm26060-201ENSMUST00000180094 123 ntBASIC-0.88□□□□□ -2.55
Sdc1P18828 Mir5124b-201ENSMUST00000184251 85 ntBASIC-0.88□□□□□ -2.55
Sdc1P18828 Gm37624-201ENSMUST00000193751 219 ntBASIC-0.88□□□□□ -2.55
Sdc1P18828 Gm26011-201ENSMUST00000104410 104 ntBASIC-0.89□□□□□ -2.55
Sdc1P18828 Gm22031-201ENSMUST00000116945 126 ntBASIC-0.89□□□□□ -2.55
Sdc1P18828 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.89□□□□□ -2.55
Sdc1P18828 Gm25060-201ENSMUST00000157374 130 ntBASIC-0.89□□□□□ -2.55
Sdc1P18828 Gm25014-201ENSMUST00000158401 103 ntBASIC-0.89□□□□□ -2.55
Sdc1P18828 Gm26097-201ENSMUST00000179642 93 ntBASIC-0.89□□□□□ -2.55
Sdc1P18828 AC167019.1-201ENSMUST00000227913 106 ntBASIC-0.89□□□□□ -2.55
Retrieved 100 of 76,532 protein–RNA pairs in 152.4 ms