Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm25636-201ENSMUST00000082666 133 ntBASIC1.57□□□□□ -2.16
Hoxd4P10628 Gm25756-201ENSMUST00000103990 136 ntBASIC1.56□□□□□ -2.16
Hoxd4P10628 Gm25609-201ENSMUST00000104019 104 ntBASIC1.56□□□□□ -2.16
Hoxd4P10628 Mir669n-201ENSMUST00000158636 54 ntBASIC1.56□□□□□ -2.16
Hoxd4P10628 Gm26029-201ENSMUST00000158659 132 ntBASIC1.56□□□□□ -2.16
Hoxd4P10628 Snord87-201ENSMUST00000175437 87 ntBASIC1.56□□□□□ -2.16
Hoxd4P10628 Gm27248-201ENSMUST00000184004 166 ntBASIC1.56□□□□□ -2.16
Hoxd4P10628 Gm25629-201ENSMUST00000084001 107 ntBASIC1.56□□□□□ -2.16
Hoxd4P10628 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.56□□□□□ -2.16
Hoxd4P10628 Gm23109-201ENSMUST00000116867 126 ntBASIC1.55□□□□□ -2.16
Hoxd4P10628 Gm12469-201ENSMUST00000117623 207 ntBASIC1.55□□□□□ -2.16
Hoxd4P10628 Gm25622-201ENSMUST00000157217 104 ntBASIC1.55□□□□□ -2.16
Hoxd4P10628 Gm25300-201ENSMUST00000175284 84 ntBASIC1.55□□□□□ -2.16
Hoxd4P10628 Mir7021-201ENSMUST00000197026 63 ntBASIC1.55□□□□□ -2.16
Hoxd4P10628 Snord60-201ENSMUST00000082834 78 ntBASIC1.55□□□□□ -2.16
Hoxd4P10628 Gm22753-201ENSMUST00000083657 107 ntBASIC1.55□□□□□ -2.16
Hoxd4P10628 Gm25496-201ENSMUST00000104430 120 ntBASIC1.54□□□□□ -2.16
Hoxd4P10628 Gm23881-201ENSMUST00000116872 66 ntBASIC1.54□□□□□ -2.16
Hoxd4P10628 Gm22403-201ENSMUST00000174919 84 ntBASIC1.54□□□□□ -2.16
Hoxd4P10628 Gm22914-201ENSMUST00000175195 77 ntBASIC1.54□□□□□ -2.16
Hoxd4P10628 Gm23289-201ENSMUST00000175615 108 ntBASIC1.54□□□□□ -2.16
Hoxd4P10628 Gm22802-201ENSMUST00000175621 89 ntBASIC1.54□□□□□ -2.16
Hoxd4P10628 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Hoxd4P10628 Gm11857-201ENSMUST00000119817 324 ntBASIC1.53□□□□□ -2.16
Hoxd4P10628 Gm24009-201ENSMUST00000157734 93 ntBASIC1.53□□□□□ -2.16
Hoxd4P10628 Gm24547-201ENSMUST00000158649 149 ntBASIC1.53□□□□□ -2.16
Hoxd4P10628 Gm22887-201ENSMUST00000178586 107 ntBASIC1.53□□□□□ -2.16
Hoxd4P10628 Mir6901-201ENSMUST00000185062 62 ntBASIC1.53□□□□□ -2.16
Hoxd4P10628 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Hoxd4P10628 Mir873a-201ENSMUST00000104863 77 ntBASIC1.52□□□□□ -2.17
Hoxd4P10628 Gm25056-201ENSMUST00000157372 62 ntBASIC1.52□□□□□ -2.17
Hoxd4P10628 Gm24728-201ENSMUST00000158226 125 ntBASIC1.52□□□□□ -2.17
Hoxd4P10628 Gm27265-201ENSMUST00000183559 77 ntBASIC1.52□□□□□ -2.17
Hoxd4P10628 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.52□□□□□ -2.17
Hoxd4P10628 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Hoxd4P10628 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Hoxd4P10628 Gm27722-201ENSMUST00000183908 76 ntBASIC1.51□□□□□ -2.17
Hoxd4P10628 Gm27898-201ENSMUST00000183987 80 ntBASIC1.51□□□□□ -2.17
Hoxd4P10628 Gm28862-201ENSMUST00000188246 163 ntBASIC1.51□□□□□ -2.17
Hoxd4P10628 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.51□□□□□ -2.17
Hoxd4P10628 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.51□□□□□ -2.17
Hoxd4P10628 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.51□□□□□ -2.17
Hoxd4P10628 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.51□□□□□ -2.17
Hoxd4P10628 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.51□□□□□ -2.17
Hoxd4P10628 Gm15692-201ENSMUST00000152173 352 ntBASIC1.5□□□□□ -2.17
Hoxd4P10628 Gm23170-201ENSMUST00000157158 106 ntBASIC1.5□□□□□ -2.17
Hoxd4P10628 Gm24394-201ENSMUST00000158141 123 ntBASIC1.5□□□□□ -2.17
Hoxd4P10628 Gm24076-201ENSMUST00000158179 94 ntBASIC1.5□□□□□ -2.17
Hoxd4P10628 Gm26158-201ENSMUST00000158973 119 ntBASIC1.5□□□□□ -2.17
Hoxd4P10628 Mir3061-201ENSMUST00000175129 91 ntBASIC1.5□□□□□ -2.17
Hoxd4P10628 Gm24311-201ENSMUST00000082570 104 ntBASIC1.5□□□□□ -2.17
Hoxd4P10628 Mir126a-201ENSMUST00000083606 73 ntBASIC1.5□□□□□ -2.17
Hoxd4P10628 Mir494-201ENSMUST00000093632 85 ntBASIC1.5□□□□□ -2.17
Hoxd4P10628 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.49□□□□□ -2.17
Hoxd4P10628 Gm25991-201ENSMUST00000102439 99 ntBASIC1.49□□□□□ -2.17
Hoxd4P10628 Gm25730-201ENSMUST00000178753 165 ntBASIC1.49□□□□□ -2.17
Hoxd4P10628 Mir6352-201ENSMUST00000184495 116 ntBASIC1.49□□□□□ -2.17
Hoxd4P10628 Mir7678-201ENSMUST00000185076 71 ntBASIC1.49□□□□□ -2.17
Hoxd4P10628 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.49□□□□□ -2.17
Hoxd4P10628 Gm26202-201ENSMUST00000082910 65 ntBASIC1.49□□□□□ -2.17
Hoxd4P10628 Gm23377-201ENSMUST00000082943 126 ntBASIC1.49□□□□□ -2.17
Hoxd4P10628 Gm23100-201ENSMUST00000083455 141 ntBASIC1.49□□□□□ -2.17
Hoxd4P10628 Mir301b-201ENSMUST00000102333 97 ntBASIC1.48□□□□□ -2.17
Hoxd4P10628 Gm24915-201ENSMUST00000157288 78 ntBASIC1.48□□□□□ -2.17
Hoxd4P10628 Gm22556-201ENSMUST00000157803 100 ntBASIC1.48□□□□□ -2.17
Hoxd4P10628 Gm25600-201ENSMUST00000158357 106 ntBASIC1.48□□□□□ -2.17
Hoxd4P10628 Gm25974-201ENSMUST00000158701 94 ntBASIC1.48□□□□□ -2.17
Hoxd4P10628 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Hoxd4P10628 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
Hoxd4P10628 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.47□□□□□ -2.17
Hoxd4P10628 Gm23172-201ENSMUST00000157160 124 ntBASIC1.47□□□□□ -2.17
Hoxd4P10628 Gm24401-201ENSMUST00000157868 91 ntBASIC1.47□□□□□ -2.17
Hoxd4P10628 Gm23857-201ENSMUST00000158379 111 ntBASIC1.47□□□□□ -2.17
Hoxd4P10628 Gm24129-201ENSMUST00000158537 97 ntBASIC1.47□□□□□ -2.17
Hoxd4P10628 Gm27297-201ENSMUST00000183395 105 ntBASIC1.47□□□□□ -2.17
Hoxd4P10628 Gm27517-201ENSMUST00000184347 236 ntBASIC1.47□□□□□ -2.17
Hoxd4P10628 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.47□□□□□ -2.17
Hoxd4P10628 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
Hoxd4P10628 Mir741-201ENSMUST00000103931 71 ntBASIC1.46□□□□□ -2.18
Hoxd4P10628 Gm24174-201ENSMUST00000158933 111 ntBASIC1.46□□□□□ -2.18
Hoxd4P10628 Gm25820-201ENSMUST00000198589 127 ntBASIC1.46□□□□□ -2.18
Hoxd4P10628 Gm24202-201ENSMUST00000082948 103 ntBASIC1.46□□□□□ -2.18
Hoxd4P10628 Gm24134-201ENSMUST00000083361 71 ntBASIC1.46□□□□□ -2.18
Hoxd4P10628 Gm6985-201ENSMUST00000121255 271 ntBASIC1.45□□□□□ -2.18
Hoxd4P10628 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.45□□□□□ -2.18
Hoxd4P10628 Gm10548-202ENSMUST00000165672 272 ntBASIC1.45□□□□□ -2.18
Hoxd4P10628 Gm44469-201ENSMUST00000198558 79 ntBASIC1.45□□□□□ -2.18
Hoxd4P10628 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Hoxd4P10628 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.45□□□□□ -2.18
Hoxd4P10628 Snord45b-201ENSMUST00000082797 71 ntBASIC1.45□□□□□ -2.18
Hoxd4P10628 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Hoxd4P10628 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Hoxd4P10628 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.44□□□□□ -2.18
Hoxd4P10628 Gm23106-201ENSMUST00000157554 101 ntBASIC1.44□□□□□ -2.18
Hoxd4P10628 Gm22078-201ENSMUST00000157593 103 ntBASIC1.44□□□□□ -2.18
Hoxd4P10628 Gm23291-201ENSMUST00000175611 78 ntBASIC1.44□□□□□ -2.18
Hoxd4P10628 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Hoxd4P10628 Gm44962-201ENSMUST00000206460 279 ntBASIC1.44□□□□□ -2.18
Hoxd4P10628 Gm22809-201ENSMUST00000082743 156 ntBASIC1.44□□□□□ -2.18
Hoxd4P10628 Gm24208-201ENSMUST00000082783 135 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 155 ms